RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 SH2D3CQ8N5H7 860 aa8.4□□□□□ -1.06
CHD8-213ENST00000557364 CSPG4P5Q96PW8 444 aa8.4□□□□□ -1.06
CHD8-213ENST00000557364 COPG2Q9UBF2 871 aa8.4□□□□□ -1.06
CHD8-213ENST00000557364 TGFBR2P37173 567 aa8.4□□□□□ -1.06
CHD8-213ENST00000557364 IRX1P78414 480 aaPredicted RBP8.4□□□□□ -1.06
CHD8-213ENST00000557364 SQLEQ14534 574 aa8.4□□□□□ -1.06
CHD8-213ENST00000557364 GPRIN3Q6ZVF9 776 aa8.4□□□□□ -1.06
CHD8-213ENST00000557364 RBM23Q86U06 439 aaKnown RBP8.4□□□□□ -1.06
CHD8-213ENST00000557364 ITFG1Q8TB96 612 aa8.4□□□□□ -1.06
CHD8-213ENST00000557364 RNPEPQ9H4A4 650 aa8.4□□□□□ -1.06
CHD8-213ENST00000557364 SNX13Q9Y5W8 968 aa8.4□□□□□ -1.06
CHD8-213ENST00000557364 EML1O00423 815 aa8.4□□□□□ -1.07
CHD8-213ENST00000557364 NR2F1P10589 423 aa8.4□□□□□ -1.07
CHD8-213ENST00000557364 NFKB1P19838 968 aa8.4□□□□□ -1.07
CHD8-213ENST00000557364 SPAM1P38567 509 aa8.4□□□□□ -1.07
CHD8-213ENST00000557364 CXCR3P49682 368 aa8.4□□□□□ -1.07
CHD8-213ENST00000557364 SOX10P56693 466 aa8.4□□□□□ -1.07
CHD8-213ENST00000557364 EIF3MQ7L2H7 374 aaKnown RBP8.4□□□□□ -1.07
CHD8-213ENST00000557364 UTP15Q8TED0 518 aaKnown RBP8.4□□□□□ -1.07
CHD8-213ENST00000557364 CLCC1Q96S66 551 aa8.4□□□□□ -1.07
CHD8-213ENST00000557364 COL1A1P02452 1464 aaPredicted RBP8.4□□□□□ -1.07
CHD8-213ENST00000557364 FPGTO14772 594 aa8.4□□□□□ -1.07
CHD8-213ENST00000557364 MAP3K6O95382 1288 aa8.4□□□□□ -1.07
CHD8-213ENST00000557364 EPHX1P07099 455 aa8.4□□□□□ -1.07
CHD8-213ENST00000557364 IDO1P14902 403 aa8.4□□□□□ -1.07
CHD8-213ENST00000557364 CDC42P60953 191 aa8.4□□□□□ -1.07
CHD8-213ENST00000557364 RAB10P61026 200 aa8.4□□□□□ -1.07
CHD8-213ENST00000557364 STXBP1P61764 594 aaKnown RBP8.4□□□□□ -1.07
CHD8-213ENST00000557364 RPTNQ6XPR3 784 aa8.4□□□□□ -1.07
CHD8-213ENST00000557364 DNAAF5Q86Y56 855 aa8.4□□□□□ -1.07
CHD8-213ENST00000557364 ZNF786Q8N393 782 aa8.4□□□□□ -1.07
CHD8-213ENST00000557364 ZSCAN1Q8NBB4 408 aa8.4□□□□□ -1.07
CHD8-213ENST00000557364 ATXN2LQ8WWM7 1075 aaKnown RBP8.4□□□□□ -1.07
CHD8-213ENST00000557364 FIG4Q92562 907 aa8.4□□□□□ -1.07
CHD8-213ENST00000557364 CENPIQ92674 756 aaPredicted RBP8.4□□□□□ -1.07
CHD8-213ENST00000557364 TPD52L3Q96J77 140 aa8.4□□□□□ -1.07
CHD8-213ENST00000557364 GINS4Q9BRT9 223 aa8.4□□□□□ -1.07
CHD8-213ENST00000557364 FAM192AQ9GZU8 254 aa8.4□□□□□ -1.07
CHD8-213ENST00000557364 POMKQ9H5K3 350 aa8.4□□□□□ -1.07
CHD8-213ENST00000557364 KCNK4Q9NYG8 393 aa8.4□□□□□ -1.07
CHD8-213ENST00000557364 V9GYQ6 96 aa8.4□□□□□ -1.07
CHD8-213ENST00000557364 MON2Q7Z3U7 1717 aa8.4□□□□□ -1.07
CHD8-213ENST00000557364 MRC1P22897 1456 aa8.4□□□□□ -1.07
CHD8-213ENST00000557364 C1RP00736 705 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 SARSP49591 514 aaKnown RBP8.39□□□□□ -1.07
CHD8-213ENST00000557364 TBCELQ5QJ74 424 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 CHST9Q7L1S5 443 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 SMYD1Q8NB12 490 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 COL26A1Q96A83 441 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 ITCHQ96J02 903 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 SLC38A3Q99624 504 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 RXFP1Q9HBX9 757 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 PALMDQ9NP74 551 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 TLX3O43711 291 aaPredicted RBP8.39□□□□□ -1.07
CHD8-213ENST00000557364 MFN2O95140 757 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 NDST2P52849 883 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 GPM6BQ13491 265 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 TREML2Q5T2D2 321 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 SMYD5Q6GMV2 418 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 MZT2AQ6P582 158 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 TSTD1Q8NFU3 115 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 EPS8L1Q8TE68 723 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 FNIP2Q9P278 1114 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 KLQ9UEF7 1012 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 MYH11P35749 1972 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 MAGEB3O15480 346 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 USP2O75604 605 aaPredicted RBP8.39□□□□□ -1.07
CHD8-213ENST00000557364 OR6B1O95007 311 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 SLC35G6P0C7Q6 338 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 CORO1AP31146 461 aaKnown RBP8.39□□□□□ -1.07
CHD8-213ENST00000557364 TRIQKQ629K1 86 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 LCLAT1Q6UWP7 414 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 MPP5Q8N3R9 675 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 TMBIM4Q9HC24 238 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 OSGEPQ9NPF4 335 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.39□□□□□ -1.07
CHD8-213ENST00000557364 SATB2Q9UPW6 733 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 A0A087X0B3 334 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 ATP5A1P25705 553 aaKnown RBP8.39□□□□□ -1.07
CHD8-213ENST00000557364 RCVRNP35243 200 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 COX10Q12887 443 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 TMC3Q7Z5M5 1100 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 TAF8Q7Z7C8 310 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 ARHGEF19Q8IW93 802 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 KCNV2Q8TDN2 545 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 FNIP1Q8TF40 1166 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 FAM136AQ96C01 138 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 ZBTB45Q96K62 511 aaPredicted RBP8.39□□□□□ -1.07
CHD8-213ENST00000557364 TMEM120AQ9BXJ8 343 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 IRX2Q9BZI1 471 aaPredicted RBP8.39□□□□□ -1.07
CHD8-213ENST00000557364 HMG20AQ9NP66 347 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 HPS4Q9NQG7 708 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 SAR1AQ9NR31 198 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 CALML5Q9NZT1 146 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.39□□□□□ -1.07
CHD8-213ENST00000557364 MAGEA13PA6NCF6 341 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 PRMT5O14744 637 aaPredicted RBP8.39□□□□□ -1.07
CHD8-213ENST00000557364 BIRC5O15392 142 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 PTPN4P29074 926 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 CAP1Q01518 475 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms