RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 ATP1A2P50993 1020 aa12.65□□□□□ -0.38
PSEN1-221ENST00000557293 SNRPD1P62314 119 aaKnown RBP12.65□□□□□ -0.38
PSEN1-221ENST00000557293 NR1D2Q14995 579 aa12.65□□□□□ -0.38
PSEN1-221ENST00000557293 SLC25A52Q3SY17 297 aa12.65□□□□□ -0.38
PSEN1-221ENST00000557293 ACBD5Q5T8D3 534 aaPredicted RBP12.65□□□□□ -0.38
PSEN1-221ENST00000557293 MANEALQ5VSG8 457 aa12.65□□□□□ -0.38
PSEN1-221ENST00000557293 SPECC1LQ69YQ0 1117 aa12.65□□□□□ -0.38
PSEN1-221ENST00000557293 ZNF438Q7Z4V0 828 aa12.65□□□□□ -0.38
PSEN1-221ENST00000557293 TAF8Q7Z7C8 310 aa12.65□□□□□ -0.38
PSEN1-221ENST00000557293 PIM3Q86V86 326 aa12.65□□□□□ -0.38
PSEN1-221ENST00000557293 FMR1NBQ8N0W7 255 aaPredicted RBP12.65□□□□□ -0.38
PSEN1-221ENST00000557293 GPBAR1Q8TDU6 330 aa12.65□□□□□ -0.38
PSEN1-221ENST00000557293 ABHD17AQ96GS6 310 aa12.65□□□□□ -0.38
PSEN1-221ENST00000557293 DHTKD1Q96HY7 919 aaPredicted RBP12.65□□□□□ -0.38
PSEN1-221ENST00000557293 SLC45A3Q96JT2 553 aa12.65□□□□□ -0.38
PSEN1-221ENST00000557293 C1QTNF7Q9BXJ2 289 aa12.65□□□□□ -0.38
PSEN1-221ENST00000557293 TMEM168Q9H0V1 697 aa12.65□□□□□ -0.38
PSEN1-221ENST00000557293 FGF22Q9HCT0 170 aa12.65□□□□□ -0.38
PSEN1-221ENST00000557293 MRPL40Q9NQ50 206 aaKnown RBP12.65□□□□□ -0.38
PSEN1-221ENST00000557293 SPATS2LQ9NUQ6 558 aaKnown RBP12.65□□□□□ -0.38
PSEN1-221ENST00000557293 PLEKHB1Q9UF11 243 aaPredicted RBP12.65□□□□□ -0.38
PSEN1-221ENST00000557293 MFHAS1Q9Y4C4 1052 aa12.65□□□□□ -0.38
PSEN1-221ENST00000557293 PAXBP1Q9Y5B6 917 aa12.65□□□□□ -0.38
PSEN1-221ENST00000557293 PPP1R3GB7ZBB8 358 aa12.64□□□□□ -0.39
PSEN1-221ENST00000557293 FAM72CH0Y354 149 aa12.64□□□□□ -0.39
PSEN1-221ENST00000557293 HGSO14964 777 aaPredicted RBP12.64□□□□□ -0.39
PSEN1-221ENST00000557293 INSIG1O15503 277 aa12.64□□□□□ -0.39
PSEN1-221ENST00000557293 FUCA1P04066 466 aa12.64□□□□□ -0.39
PSEN1-221ENST00000557293 SLC9A1P19634 815 aa12.64□□□□□ -0.39
PSEN1-221ENST00000557293 BMP6P22004 513 aa12.64□□□□□ -0.39
PSEN1-221ENST00000557293 HTR1BP28222 390 aa12.64□□□□□ -0.39
PSEN1-221ENST00000557293 CLCN1P35523 988 aa12.64□□□□□ -0.39
PSEN1-221ENST00000557293 FLT3P36888 993 aa12.64□□□□□ -0.39
PSEN1-221ENST00000557293 GABRB2P47870 512 aa12.64□□□□□ -0.39
PSEN1-221ENST00000557293 MARSP56192 900 aaKnown RBP12.64□□□□□ -0.39
PSEN1-221ENST00000557293 ARHGEF7Q14155 803 aa12.64□□□□□ -0.39
PSEN1-221ENST00000557293 ARHGAP44Q17R89 818 aa12.64□□□□□ -0.39
PSEN1-221ENST00000557293 AMZ1Q400G9 498 aa12.64□□□□□ -0.39
PSEN1-221ENST00000557293 FAM72AQ5TYM5 149 aa12.64□□□□□ -0.39
PSEN1-221ENST00000557293 ISM2Q6H9L7 571 aa12.64□□□□□ -0.39
PSEN1-221ENST00000557293 FAM72DQ6L9T8 149 aa12.64□□□□□ -0.39
PSEN1-221ENST00000557293 ENOSF1Q7L5Y1 443 aa12.64□□□□□ -0.39
PSEN1-221ENST00000557293 FAM72BQ86X60 149 aa12.64□□□□□ -0.39
PSEN1-221ENST00000557293 NRROSQ86YC3 692 aa12.64□□□□□ -0.39
PSEN1-221ENST00000557293 CACNA2D3Q8IZS8 1091 aa12.64□□□□□ -0.39
PSEN1-221ENST00000557293 IL22RA1Q8N6P7 574 aa12.64□□□□□ -0.39
PSEN1-221ENST00000557293 SHC3Q92529 594 aa12.64□□□□□ -0.39
PSEN1-221ENST00000557293 CATSPER2Q96P56 530 aa12.64□□□□□ -0.39
PSEN1-221ENST00000557293 TTYH3Q9C0H2 523 aa12.64□□□□□ -0.39
PSEN1-221ENST00000557293 KLC2Q9H0B6 622 aa12.64□□□□□ -0.39
PSEN1-221ENST00000557293 NOL6Q9H6R4 1146 aaKnown RBP12.64□□□□□ -0.39
PSEN1-221ENST00000557293 PLCB1Q9NQ66 1216 aa12.64□□□□□ -0.39
PSEN1-221ENST00000557293 TMEM59LQ9UK28 342 aa12.64□□□□□ -0.39
PSEN1-221ENST00000557293 AJAP1Q9UKB5 411 aaPredicted RBP12.64□□□□□ -0.39
PSEN1-221ENST00000557293 NEU3Q9UQ49 428 aa12.64□□□□□ -0.39
PSEN1-221ENST00000557293 CREBBPQ92793 2442 aa12.64□□□□□ -0.39
PSEN1-221ENST00000557293 TEP1Q99973 2627 aaKnown RBP12.64□□□□□ -0.39
PSEN1-221ENST00000557293 SPTBN1Q01082 2364 aaKnown RBP12.64□□□□□ -0.39
PSEN1-221ENST00000557293 CACNA1DQ01668 2161 aa12.63□□□□□ -0.39
PSEN1-221ENST00000557293 LOC101059948A0A1B0GTJ6 334 aa12.63□□□□□ -0.39
PSEN1-221ENST00000557293 ZNF891A8MT65 544 aaPredicted RBP12.63□□□□□ -0.39
PSEN1-221ENST00000557293 B4DGG1 531 aa12.63□□□□□ -0.39
PSEN1-221ENST00000557293 KDELR3O43731 214 aa12.63□□□□□ -0.39
PSEN1-221ENST00000557293 RAD1O60671 282 aa12.63□□□□□ -0.39
PSEN1-221ENST00000557293 FGF1P05230 155 aa12.63□□□□□ -0.39
PSEN1-221ENST00000557293 OAS2P29728 719 aaKnown RBP12.63□□□□□ -0.39
PSEN1-221ENST00000557293 USP8P40818 1118 aa12.63□□□□□ -0.39
PSEN1-221ENST00000557293 LIMK2P53671 638 aa12.63□□□□□ -0.39
PSEN1-221ENST00000557293 MAZP56270 477 aaKnown RBP12.63□□□□□ -0.39
PSEN1-221ENST00000557293 KRT85P78386 507 aa12.63□□□□□ -0.39
PSEN1-221ENST00000557293 MTM1Q13496 603 aa12.63□□□□□ -0.39
PSEN1-221ENST00000557293 SQSTM1Q13501 440 aa12.63□□□□□ -0.39
PSEN1-221ENST00000557293 POLD3Q15054 466 aaPredicted RBP12.63□□□□□ -0.39
PSEN1-221ENST00000557293 FAM131BQ86XD5 332 aa12.63□□□□□ -0.39
PSEN1-221ENST00000557293 PELI3Q8N2H9 469 aa12.63□□□□□ -0.39
PSEN1-221ENST00000557293 ART4Q93070 314 aa12.63□□□□□ -0.39
PSEN1-221ENST00000557293 CCDC74BQ96LY2 380 aa12.63□□□□□ -0.39
PSEN1-221ENST00000557293 CRACR2AQ9BSW2 395 aa12.63□□□□□ -0.39
PSEN1-221ENST00000557293 LGR4Q9BXB1 951 aa12.63□□□□□ -0.39
PSEN1-221ENST00000557293 MAGEH1Q9H213 219 aa12.63□□□□□ -0.39
PSEN1-221ENST00000557293 DPEP2Q9H4A9 486 aa12.63□□□□□ -0.39
PSEN1-221ENST00000557293 OCIAD1Q9NX40 245 aa12.63□□□□□ -0.39
PSEN1-221ENST00000557293 KCNK4Q9NYG8 393 aa12.63□□□□□ -0.39
PSEN1-221ENST00000557293 DNAI1Q9UI46 699 aa12.63□□□□□ -0.39
PSEN1-221ENST00000557293 PILRAQ9UKJ1 303 aa12.63□□□□□ -0.39
PSEN1-221ENST00000557293 STAP1Q9ULZ2 295 aa12.63□□□□□ -0.39
PSEN1-221ENST00000557293 TSPAN11A1L157 253 aa12.62□□□□□ -0.39
PSEN1-221ENST00000557293 TNFRSF10CO14798 259 aa12.62□□□□□ -0.39
PSEN1-221ENST00000557293 BUB1BO60566 1050 aaPredicted RBP12.62□□□□□ -0.39
PSEN1-221ENST00000557293 TMCC1O94876 653 aa12.62□□□□□ -0.39
PSEN1-221ENST00000557293 HOXC4P09017 264 aaPredicted RBP12.62□□□□□ -0.39
PSEN1-221ENST00000557293 RNF224P0DH78 156 aa12.62□□□□□ -0.39
PSEN1-221ENST00000557293 GM2AP17900 193 aa12.62□□□□□ -0.39
PSEN1-221ENST00000557293 NR1D1P20393 614 aa12.62□□□□□ -0.39
PSEN1-221ENST00000557293 ALDH4A1P30038 563 aa12.62□□□□□ -0.39
PSEN1-221ENST00000557293 TRIM23P36406 574 aa12.62□□□□□ -0.39
PSEN1-221ENST00000557293 SCNN1AP37088 669 aa12.62□□□□□ -0.39
PSEN1-221ENST00000557293 LIG3P49916 1009 aa12.62□□□□□ -0.39
PSEN1-221ENST00000557293 MLLT10P55197 1068 aa12.62□□□□□ -0.39
PSEN1-221ENST00000557293 KIAA1024LP59773 190 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms