RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 MC2RQ01718 297 aa12.61□□□□□ -0.39
PSEN1-220ENST00000557037 DNM1Q05193 864 aaKnown RBP12.61□□□□□ -0.39
PSEN1-220ENST00000557037 SEMA5AQ13591 1074 aa12.61□□□□□ -0.39
PSEN1-220ENST00000557037 ALFQ53S48 1182 aa12.61□□□□□ -0.39
PSEN1-220ENST00000557037 CPZQ66K79 652 aa12.61□□□□□ -0.39
PSEN1-220ENST00000557037 ANKRD40Q6AI12 368 aa12.61□□□□□ -0.39
PSEN1-220ENST00000557037 TTC7BQ86TV6 843 aa12.61□□□□□ -0.39
PSEN1-220ENST00000557037 FAM186BQ8IYM0 893 aa12.61□□□□□ -0.39
PSEN1-220ENST00000557037 ESX1Q8N693 406 aa12.61□□□□□ -0.39
PSEN1-220ENST00000557037 PCDH20Q8N6Y1 951 aaKnown RBP12.61□□□□□ -0.39
PSEN1-220ENST00000557037 DCAF4L2Q8NA75 395 aa12.61□□□□□ -0.39
PSEN1-220ENST00000557037 ATL2Q8NHH9 583 aa12.61□□□□□ -0.39
PSEN1-220ENST00000557037 ZDHHC1Q8WTX9 485 aa12.61□□□□□ -0.39
PSEN1-220ENST00000557037 ARHGEF26Q96DR7 871 aa12.61□□□□□ -0.39
PSEN1-220ENST00000557037 ZSWIM1Q9BR11 485 aa12.61□□□□□ -0.39
PSEN1-220ENST00000557037 SIK2Q9H0K1 926 aa12.61□□□□□ -0.39
PSEN1-220ENST00000557037 KCTD10Q9H3F6 313 aa12.61□□□□□ -0.39
PSEN1-220ENST00000557037 RUBCNLQ9H714 662 aa12.61□□□□□ -0.39
PSEN1-220ENST00000557037 SUDS3Q9H7L9 328 aaPredicted RBP12.61□□□□□ -0.39
PSEN1-220ENST00000557037 FGF22Q9HCT0 170 aa12.61□□□□□ -0.39
PSEN1-220ENST00000557037 DGKBQ9Y6T7 804 aa12.61□□□□□ -0.39
PSEN1-220ENST00000557037 ANKUB1A6NFN9 424 aa12.6□□□□□ -0.39
PSEN1-220ENST00000557037 TMEM202A6NGA9 273 aa12.6□□□□□ -0.39
PSEN1-220ENST00000557037 KRIT1O00522 736 aa12.6□□□□□ -0.39
PSEN1-220ENST00000557037 ZW10O43264 779 aa12.6□□□□□ -0.39
PSEN1-220ENST00000557037 ECEL1O95672 775 aa12.6□□□□□ -0.39
PSEN1-220ENST00000557037 PCCBP05166 539 aa12.6□□□□□ -0.39
PSEN1-220ENST00000557037 PDIA4P13667 645 aaKnown RBP12.6□□□□□ -0.39
PSEN1-220ENST00000557037 SERPINH1P50454 418 aaKnown RBP12.6□□□□□ -0.39
PSEN1-220ENST00000557037 CCL11P51671 97 aa12.6□□□□□ -0.39
PSEN1-220ENST00000557037 STK4Q13043 487 aa12.6□□□□□ -0.39
PSEN1-220ENST00000557037 CUL2Q13617 745 aa12.6□□□□□ -0.39
PSEN1-220ENST00000557037 KRT39Q6A163 491 aa12.6□□□□□ -0.39
PSEN1-220ENST00000557037 APLFQ8IW19 511 aaPredicted RBP12.6□□□□□ -0.39
PSEN1-220ENST00000557037 KIAA1524Q8TCG1 905 aa12.6□□□□□ -0.39
PSEN1-220ENST00000557037 PATE1Q8WXA2 126 aa12.6□□□□□ -0.39
PSEN1-220ENST00000557037 HSFY1Q96LI6 401 aa12.6□□□□□ -0.39
PSEN1-220ENST00000557037 KLHL32Q96NJ5 620 aa12.6□□□□□ -0.39
PSEN1-220ENST00000557037 RANBP9Q96S59 729 aa12.6□□□□□ -0.39
PSEN1-220ENST00000557037 ST7Q9NRC1 585 aa12.6□□□□□ -0.39
PSEN1-220ENST00000557037 ASF1BQ9NVP2 202 aa12.6□□□□□ -0.39
PSEN1-220ENST00000557037 DDIT4Q9NX09 232 aa12.6□□□□□ -0.39
PSEN1-220ENST00000557037 RAB20Q9NX57 234 aa12.6□□□□□ -0.39
PSEN1-220ENST00000557037 MOSPD1Q9UJG1 213 aa12.6□□□□□ -0.39
PSEN1-220ENST00000557037 SNX10Q9Y5X0 201 aa12.6□□□□□ -0.39
PSEN1-220ENST00000557037 PCSK5Q92824 1860 aa12.59□□□□□ -0.39
PSEN1-220ENST00000557037 IGHV1OR21-1A0A087WYE8 117 aa12.59□□□□□ -0.39
PSEN1-220ENST00000557037 PDXKO00764 312 aa12.59□□□□□ -0.39
PSEN1-220ENST00000557037 LRCH4O75427 683 aa12.59□□□□□ -0.39
PSEN1-220ENST00000557037 FGF1P05230 155 aa12.59□□□□□ -0.39
PSEN1-220ENST00000557037 SLC2A3P11169 496 aa12.59□□□□□ -0.39
PSEN1-220ENST00000557037 BRD2P25440 801 aaKnown RBP12.59□□□□□ -0.39
PSEN1-220ENST00000557037 CCR1P32246 355 aa12.59□□□□□ -0.39
PSEN1-220ENST00000557037 MAN1A1P33908 653 aa12.59□□□□□ -0.39
PSEN1-220ENST00000557037 CUL4BQ13620 913 aa12.59□□□□□ -0.39
PSEN1-220ENST00000557037 ELOAQ14241 798 aaKnown RBP12.59□□□□□ -0.39
PSEN1-220ENST00000557037 NR1D2Q14995 579 aa12.59□□□□□ -0.39
PSEN1-220ENST00000557037 TAF5Q15542 800 aa12.59□□□□□ -0.39
PSEN1-220ENST00000557037 TESK1Q15569 626 aa12.59□□□□□ -0.39
PSEN1-220ENST00000557037 INTS8Q75QN2 995 aaKnown RBP12.59□□□□□ -0.39
PSEN1-220ENST00000557037 TFAP2DQ7Z6R9 452 aa12.59□□□□□ -0.39
PSEN1-220ENST00000557037 C17orf82Q86X59 251 aaPredicted RBP12.59□□□□□ -0.39
PSEN1-220ENST00000557037 GALNT6Q8NCL4 622 aa12.59□□□□□ -0.39
PSEN1-220ENST00000557037 KIAA0895Q8NCT3 520 aa12.59□□□□□ -0.39
PSEN1-220ENST00000557037 FBXL13Q8NEE6 735 aa12.59□□□□□ -0.39
PSEN1-220ENST00000557037 OR56A4Q8NGH8 313 aa12.59□□□□□ -0.39
PSEN1-220ENST00000557037 TMEM174Q8WUU8 243 aa12.59□□□□□ -0.39
PSEN1-220ENST00000557037 FAXDC2Q96IV6 333 aa12.59□□□□□ -0.39
PSEN1-220ENST00000557037 ZPBPQ9BS86 351 aa12.59□□□□□ -0.39
PSEN1-220ENST00000557037 CEP44Q9C0F1 390 aa12.59□□□□□ -0.39
PSEN1-220ENST00000557037 CUEDC2Q9H467 287 aa12.59□□□□□ -0.39
PSEN1-220ENST00000557037 KIAA1257Q9ULG3 409 aa12.59□□□□□ -0.39
PSEN1-220ENST00000557037 ANKRD36A6QL64 1941 aa12.58□□□□□ -0.39
PSEN1-220ENST00000557037 PPM1DO15297 605 aa12.58□□□□□ -0.4
PSEN1-220ENST00000557037 SART1O43290 800 aaKnown RBP12.58□□□□□ -0.4
PSEN1-220ENST00000557037 PAGE1O75459 146 aa12.58□□□□□ -0.4
PSEN1-220ENST00000557037 ZMPSTE24O75844 475 aa12.58□□□□□ -0.4
PSEN1-220ENST00000557037 SNRPB2P08579 225 aaKnown RBP12.58□□□□□ -0.4
PSEN1-220ENST00000557037 ZNF28P17035 718 aa12.58□□□□□ -0.4
PSEN1-220ENST00000557037 BMP6P22004 513 aa12.58□□□□□ -0.4
PSEN1-220ENST00000557037 VARSP26640 1264 aaKnown RBP12.58□□□□□ -0.4
PSEN1-220ENST00000557037 GPR3P46089 330 aa12.58□□□□□ -0.4
PSEN1-220ENST00000557037 MXI1P50539 228 aa12.58□□□□□ -0.4
PSEN1-220ENST00000557037 EIF4EBP2Q13542 120 aaPredicted RBP12.58□□□□□ -0.4
PSEN1-220ENST00000557037 ZRSR2Q15696 482 aaKnown RBP12.58□□□□□ -0.4
PSEN1-220ENST00000557037 SLC6A19Q695T7 634 aa12.58□□□□□ -0.4
PSEN1-220ENST00000557037 RETSATQ6NUM9 610 aa12.58□□□□□ -0.4
PSEN1-220ENST00000557037 TMEM71Q6P5X7 295 aa12.58□□□□□ -0.4
PSEN1-220ENST00000557037 GDF7Q7Z4P5 450 aa12.58□□□□□ -0.4
PSEN1-220ENST00000557037 ZNF761Q86XN6 746 aaPredicted RBP12.58□□□□□ -0.4
PSEN1-220ENST00000557037 CISD2Q8N5K1 135 aaKnown RBP12.58□□□□□ -0.4
PSEN1-220ENST00000557037 PLA2G15Q8NCC3 412 aa12.58□□□□□ -0.4
PSEN1-220ENST00000557037 SNRNP40Q96DI7 357 aaKnown RBP12.58□□□□□ -0.4
PSEN1-220ENST00000557037 POPDC2Q9HBU9 364 aa12.58□□□□□ -0.4
PSEN1-220ENST00000557037 FBXO8Q9NRD0 319 aa12.58□□□□□ -0.4
PSEN1-220ENST00000557037 SMC3Q9UQE7 1217 aa12.58□□□□□ -0.4
PSEN1-220ENST00000557037 MDC1Q14676 2089 aaKnown RBP12.57□□□□□ -0.4
PSEN1-220ENST00000557037 ACANP16112 2415 aa12.57□□□□□ -0.4
PSEN1-220ENST00000557037 PVALEFA0A1B0GWK0 134 aa12.57□□□□□ -0.4
PSEN1-220ENST00000557037 POLR1CO15160 346 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms