RNA–Protein interactions for RNA: ENST00000557005.1

SYNE2-223, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-223ENST00000557005 DHX33Q9H6R0 707 aaKnown RBP5.01□□□□□ -1.61
SYNE2-223ENST00000557005 NMRK2Q9NPI5 230 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 OGDHLQ9ULD0 1010 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 PHF24Q9UPV7 400 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 FAM32AQ9Y421 112 aaKnown RBP5.01□□□□□ -1.61
SYNE2-223ENST00000557005 C10orf71Q711Q0 1435 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 PTPRJQ12913 1337 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 BTN3A3O00478 584 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 ACKR2O00590 384 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 CCL22O00626 93 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 ZBTB24O43167 697 aaPredicted RBP5.01□□□□□ -1.61
SYNE2-223ENST00000557005 TSPAN3O60637 253 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 WBP4O75554 376 aaKnown RBP5.01□□□□□ -1.61
SYNE2-223ENST00000557005 LRIG2O94898 1065 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 ARIH2O95376 493 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 ASS1P00966 412 aaKnown RBP5.01□□□□□ -1.61
SYNE2-223ENST00000557005 ALOX5P09917 674 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 CYP2C9P11712 490 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 IL12AP29459 219 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 AKT1P31749 480 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 JAG1P78504 1218 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 MSLNQ13421 630 aaPredicted RBP5.01□□□□□ -1.61
SYNE2-223ENST00000557005 DDX39BQ13838 428 aaKnown RBP5.01□□□□□ -1.61
SYNE2-223ENST00000557005 PDZK1Q5T2W1 519 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 NCBP2-AS2Q69YL0 99 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 NEK5Q6P3R8 708 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 ZNF549Q6P9A3 640 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 RHBDF2Q6PJF5 856 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 METTL7BQ6UX53 244 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 ZPBP2Q6X784 338 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 MILR1Q7Z6M3 343 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 ZC3H7AQ8IWR0 971 aaKnown RBP5.01□□□□□ -1.61
SYNE2-223ENST00000557005 HS6ST3Q8IZP7 471 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 ATP6V0D2Q8N8Y2 350 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 HEXDCQ8WVB3 486 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 MED8Q96G25 268 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 DEPDC7Q96QD5 511 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 CXorf21Q9HAI6 301 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 IMPAD1Q9NX62 359 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 DNAJB4Q9UDY4 337 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 TRAF6Q9Y4K3 522 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 ARIH1Q9Y4X5 557 aaPredicted RBP5.01□□□□□ -1.61
SYNE2-223ENST00000557005 U3KQV3 271 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 EVPLLA8MZ36 301 aa5□□□□□ -1.61
SYNE2-223ENST00000557005 SPATA31C2B4DYI2 1134 aa5□□□□□ -1.61
SYNE2-223ENST00000557005 PIP5K1BO14986 540 aa5□□□□□ -1.61
SYNE2-223ENST00000557005 NCAM2O15394 837 aa5□□□□□ -1.61
SYNE2-223ENST00000557005 GAS2O43903 313 aaKnown RBP5□□□□□ -1.61
SYNE2-223ENST00000557005 ERCC2P18074 760 aa5□□□□□ -1.61
SYNE2-223ENST00000557005 AOC1P19801 751 aa5□□□□□ -1.61
SYNE2-223ENST00000557005 CCR1P32246 355 aa5□□□□□ -1.61
SYNE2-223ENST00000557005 RPS9P46781 194 aaKnown RBP5□□□□□ -1.61
SYNE2-223ENST00000557005 PGGT1BP53609 377 aa5□□□□□ -1.61
SYNE2-223ENST00000557005 RPL38P63173 70 aaKnown RBP5□□□□□ -1.61
SYNE2-223ENST00000557005 PIGFQ07326 219 aa5□□□□□ -1.61
SYNE2-223ENST00000557005 LSAMPQ13449 338 aa5□□□□□ -1.61
SYNE2-223ENST00000557005 TGFBIQ15582 683 aa5□□□□□ -1.61
SYNE2-223ENST00000557005 MGAT5BQ3V5L5 792 aa5□□□□□ -1.61
SYNE2-223ENST00000557005 ZNF57Q68EA5 555 aaPredicted RBP5□□□□□ -1.61
SYNE2-223ENST00000557005 NIPAL1Q6NVV3 410 aa5□□□□□ -1.61
SYNE2-223ENST00000557005 PMF1Q6P1K2 205 aa5□□□□□ -1.61
SYNE2-223ENST00000557005 ABHD15Q6UXT9 468 aa5□□□□□ -1.61
SYNE2-223ENST00000557005 ARHGAP36Q6ZRI8 547 aa5□□□□□ -1.61
SYNE2-223ENST00000557005 DET1Q7L5Y6 550 aa5□□□□□ -1.61
SYNE2-223ENST00000557005 CLHC1Q8NHS4 586 aa5□□□□□ -1.61
SYNE2-223ENST00000557005 ADI1Q9BV57 179 aa5□□□□□ -1.61
SYNE2-223ENST00000557005 KLHL3Q9UH77 587 aa5□□□□□ -1.61
SYNE2-223ENST00000557005 POLG2Q9UHN1 485 aa5□□□□□ -1.61
SYNE2-223ENST00000557005 ATP6V1HQ9UI12 483 aa5□□□□□ -1.61
SYNE2-223ENST00000557005 CCDC182A6NF36 153 aa5□□□□□ -1.61
SYNE2-223ENST00000557005 BBIP1A8MTZ0 92 aa5□□□□□ -1.61
SYNE2-223ENST00000557005 LRATO95237 230 aa5□□□□□ -1.61
SYNE2-223ENST00000557005 LIMK2P53671 638 aa5□□□□□ -1.61
SYNE2-223ENST00000557005 SLC18A1P54219 525 aa5□□□□□ -1.61
SYNE2-223ENST00000557005 COPZ1P61923 177 aa5□□□□□ -1.61
SYNE2-223ENST00000557005 LIPEQ05469 1076 aa5□□□□□ -1.61
SYNE2-223ENST00000557005 CSTF3Q12996 717 aaKnown RBP5□□□□□ -1.61
SYNE2-223ENST00000557005 TCEAL1Q15170 157 aa5□□□□□ -1.61
SYNE2-223ENST00000557005 FSCN1Q16658 493 aaKnown RBP5□□□□□ -1.61
SYNE2-223ENST00000557005 GPR158Q5T848 1215 aa5□□□□□ -1.61
SYNE2-223ENST00000557005 MFSD4BQ5TF39 518 aa5□□□□□ -1.61
SYNE2-223ENST00000557005 NAPRTQ6XQN6 538 aa5□□□□□ -1.61
SYNE2-223ENST00000557005 FAM126BQ8IXS8 530 aa5□□□□□ -1.61
SYNE2-223ENST00000557005 TMEM192Q8IY95 271 aa5□□□□□ -1.61
SYNE2-223ENST00000557005 REPS2Q8NFH8 660 aa5□□□□□ -1.61
SYNE2-223ENST00000557005 DNERQ8NFT8 737 aa5□□□□□ -1.61
SYNE2-223ENST00000557005 DENND1AQ8TEH3 1009 aa5□□□□□ -1.61
SYNE2-223ENST00000557005 SLC10A4Q96EP9 437 aa5□□□□□ -1.61
SYNE2-223ENST00000557005 GPATCH1Q9BRR8 931 aaKnown RBP5□□□□□ -1.61
SYNE2-223ENST00000557005 GIN1Q9NXP7 522 aa5□□□□□ -1.61
SYNE2-223ENST00000557005 SMPD3Q9NY59 655 aaPredicted RBP5□□□□□ -1.61
SYNE2-223ENST00000557005 OR12D3Q9UGF7 316 aa5□□□□□ -1.61
SYNE2-223ENST00000557005 IKZF3Q9UKT9 509 aa5□□□□□ -1.61
SYNE2-223ENST00000557005 TEX264Q9Y6I9 313 aa5□□□□□ -1.61
SYNE2-223ENST00000557005 COL22A1Q8NFW1 1626 aaPredicted RBP5□□□□□ -1.61
SYNE2-223ENST00000557005 PRR23D1E9PI22 279 aaPredicted RBP5□□□□□ -1.61
SYNE2-223ENST00000557005 BCKDKO14874 412 aa5□□□□□ -1.61
SYNE2-223ENST00000557005 SNPHO15079 494 aa5□□□□□ -1.61
SYNE2-223ENST00000557005 HIST1H2AGP0C0S8 130 aaPredicted RBP5□□□□□ -1.61
SYNE2-223ENST00000557005 PRR23D2P0DMB1 279 aaPredicted RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms