RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 C1QTNF7Q9BXJ2 289 aa5.83□□□□□ -1.48
ATXN3-245ENST00000556958 TRIM8Q9BZR9 551 aa5.83□□□□□ -1.48
ATXN3-245ENST00000556958 XYLT2Q9H1B5 865 aa5.83□□□□□ -1.48
ATXN3-245ENST00000556958 FBXO8Q9NRD0 319 aa5.83□□□□□ -1.48
ATXN3-245ENST00000556958 ABCC13Q9NSE7 274 aa5.83□□□□□ -1.48
ATXN3-245ENST00000556958 LUZP4Q9P127 313 aa5.83□□□□□ -1.48
ATXN3-245ENST00000556958 SFMBT1Q9UHJ3 866 aa5.83□□□□□ -1.48
ATXN3-245ENST00000556958 MRPS18BQ9Y676 258 aaKnown RBP5.83□□□□□ -1.48
ATXN3-245ENST00000556958 ANAPC1Q9H1A4 1944 aa5.83□□□□□ -1.48
ATXN3-245ENST00000556958 CSMD2Q7Z408 3487 aa5.83□□□□□ -1.48
ATXN3-245ENST00000556958 FN1P02751 2386 aaKnown RBP5.82□□□□□ -1.48
ATXN3-245ENST00000556958 CKAP5Q14008 2032 aa5.82□□□□□ -1.48
ATXN3-245ENST00000556958 MN1Q10571 1320 aaPredicted RBP5.82□□□□□ -1.48
ATXN3-245ENST00000556958 IGLON5A6NGN9 336 aa5.82□□□□□ -1.48
ATXN3-245ENST00000556958 NEMP1O14524 444 aa5.82□□□□□ -1.48
ATXN3-245ENST00000556958 EIF5BO60841 1220 aaKnown RBP5.82□□□□□ -1.48
ATXN3-245ENST00000556958 DTNBO60941 627 aa5.82□□□□□ -1.48
ATXN3-245ENST00000556958 CREG1O75629 220 aa5.82□□□□□ -1.48
ATXN3-245ENST00000556958 DNAJB5O75953 348 aa5.82□□□□□ -1.48
ATXN3-245ENST00000556958 GCNT3O95395 438 aa5.82□□□□□ -1.48
ATXN3-245ENST00000556958 TNFP01375 233 aa5.82□□□□□ -1.48
ATXN3-245ENST00000556958 GAP43P17677 238 aa5.82□□□□□ -1.48
ATXN3-245ENST00000556958 HTR1EP28566 365 aa5.82□□□□□ -1.48
ATXN3-245ENST00000556958 CD1CP29017 333 aa5.82□□□□□ -1.48
ATXN3-245ENST00000556958 UBA7P41226 1012 aa5.82□□□□□ -1.48
ATXN3-245ENST00000556958 GPR3P46089 330 aa5.82□□□□□ -1.48
ATXN3-245ENST00000556958 AP3M2P53677 418 aa5.82□□□□□ -1.48
ATXN3-245ENST00000556958 OR1D5P58170 312 aa5.82□□□□□ -1.48
ATXN3-245ENST00000556958 GUCY1B3Q02153 619 aa5.82□□□□□ -1.48
ATXN3-245ENST00000556958 LTBQ06643 244 aa5.82□□□□□ -1.48
ATXN3-245ENST00000556958 SQSTM1Q13501 440 aa5.82□□□□□ -1.48
ATXN3-245ENST00000556958 LRP8Q14114 963 aa5.82□□□□□ -1.48
ATXN3-245ENST00000556958 HLTFQ14527 1009 aaKnown RBP eCLIP5.82□□□□□ -1.48
ATXN3-245ENST00000556958 ANKRD1Q15327 319 aa5.82□□□□□ -1.48
ATXN3-245ENST00000556958 IL17AQ16552 155 aa5.82□□□□□ -1.48
ATXN3-245ENST00000556958 ZNF630Q2M218 657 aaPredicted RBP5.82□□□□□ -1.48
ATXN3-245ENST00000556958 FAM133BQ5BKY9 247 aaKnown RBP5.82□□□□□ -1.48
ATXN3-245ENST00000556958 BMP2KLQ5H9B9 411 aa5.82□□□□□ -1.48
ATXN3-245ENST00000556958 BSPRYQ5W0U4 402 aa5.82□□□□□ -1.48
ATXN3-245ENST00000556958 PM20D1Q6GTS8 502 aa5.82□□□□□ -1.48
ATXN3-245ENST00000556958 C6orf15Q6UXA7 325 aaPredicted RBP5.82□□□□□ -1.48
ATXN3-245ENST00000556958 BNC2Q6ZN30 1099 aaPredicted RBP5.82□□□□□ -1.48
ATXN3-245ENST00000556958 STXBP4Q6ZWJ1 553 aa5.82□□□□□ -1.48
ATXN3-245ENST00000556958 TAF8Q7Z7C8 310 aa5.82□□□□□ -1.48
ATXN3-245ENST00000556958 SFR1Q86XK3 245 aa5.82□□□□□ -1.48
ATXN3-245ENST00000556958 TGIF2LYQ8IUE0 185 aa5.82□□□□□ -1.48
ATXN3-245ENST00000556958 CBWD2Q8IUF1 395 aa5.82□□□□□ -1.48
ATXN3-245ENST00000556958 RASSF8Q8NHQ8 419 aa5.82□□□□□ -1.48
ATXN3-245ENST00000556958 CHTF18Q8WVB6 975 aa5.82□□□□□ -1.48
ATXN3-245ENST00000556958 NDRG1Q92597 394 aaKnown RBP5.82□□□□□ -1.48
ATXN3-245ENST00000556958 CCDC127Q96BQ5 260 aa5.82□□□□□ -1.48
ATXN3-245ENST00000556958 C14orf79Q96F83 325 aa5.82□□□□□ -1.48
ATXN3-245ENST00000556958 AK8Q96MA6 479 aa5.82□□□□□ -1.48
ATXN3-245ENST00000556958 IPO9Q96P70 1041 aaKnown RBP5.82□□□□□ -1.48
ATXN3-245ENST00000556958 RANBP9Q96S59 729 aa5.82□□□□□ -1.48
ATXN3-245ENST00000556958 NUDT22Q9BRQ3 303 aa5.82□□□□□ -1.48
ATXN3-245ENST00000556958 NT5C1AQ9BXI3 368 aa5.82□□□□□ -1.48
ATXN3-245ENST00000556958 KRTAP4-2Q9BYR5 136 aa5.82□□□□□ -1.48
ATXN3-245ENST00000556958 ING2Q9H160 280 aa5.82□□□□□ -1.48
ATXN3-245ENST00000556958 DPEP2Q9H4A9 486 aa5.82□□□□□ -1.48
ATXN3-245ENST00000556958 CBX8Q9HC52 389 aa5.82□□□□□ -1.48
ATXN3-245ENST00000556958 OCIAD1Q9NX40 245 aa5.82□□□□□ -1.48
ATXN3-245ENST00000556958 ZDHHC3Q9NYG2 299 aa5.82□□□□□ -1.48
ATXN3-245ENST00000556958 RCOR3Q9P2K3 495 aaPredicted RBP5.82□□□□□ -1.48
ATXN3-245ENST00000556958 OSGIN2Q9Y236 505 aa5.82□□□□□ -1.48
ATXN3-245ENST00000556958 FADS3Q9Y5Q0 445 aa5.82□□□□□ -1.48
ATXN3-245ENST00000556958 PRRC2CQ9Y520 2896 aaKnown RBP5.82□□□□□ -1.48
ATXN3-245ENST00000556958 JMJD1CQ15652 2540 aa5.82□□□□□ -1.48
ATXN3-245ENST00000556958 TACC2O95359 2948 aa5.81□□□□□ -1.48
ATXN3-245ENST00000556958 CSPG4Q6UVK1 2322 aa5.81□□□□□ -1.48
ATXN3-245ENST00000556958 POLR1CO15160 346 aaPredicted RBP5.81□□□□□ -1.48
ATXN3-245ENST00000556958 CLIC2O15247 247 aa5.81□□□□□ -1.48
ATXN3-245ENST00000556958 REC8O95072 547 aa5.81□□□□□ -1.48
ATXN3-245ENST00000556958 ADRB3P13945 408 aa5.81□□□□□ -1.48
ATXN3-245ENST00000556958 PDGFRAP16234 1089 aa5.81□□□□□ -1.48
ATXN3-245ENST00000556958 F8A1P23610 371 aa5.81□□□□□ -1.48
ATXN3-245ENST00000556958 CASP14P31944 242 aa5.81□□□□□ -1.48
ATXN3-245ENST00000556958 TKTL1P51854 596 aa5.81□□□□□ -1.48
ATXN3-245ENST00000556958 TBX4P57082 545 aa5.81□□□□□ -1.48
ATXN3-245ENST00000556958 SRP54P61011 504 aaKnown RBP5.81□□□□□ -1.48
ATXN3-245ENST00000556958 BIRC3Q13489 604 aa5.81□□□□□ -1.48
ATXN3-245ENST00000556958 PSMD6Q15008 389 aa5.81□□□□□ -1.48
ATXN3-245ENST00000556958 SGSM1Q2NKQ1 1148 aa5.81□□□□□ -1.48
ATXN3-245ENST00000556958 MS4A13Q5J8X5 152 aa5.81□□□□□ -1.48
ATXN3-245ENST00000556958 EFHC1Q5JVL4 640 aa5.81□□□□□ -1.48
ATXN3-245ENST00000556958 TMEM71Q6P5X7 295 aa5.81□□□□□ -1.48
ATXN3-245ENST00000556958 ENPP7Q6UWV6 458 aa5.81□□□□□ -1.48
ATXN3-245ENST00000556958 SCARA5Q6ZMJ2 495 aa5.81□□□□□ -1.48
ATXN3-245ENST00000556958 LRRN4CLQ8ND94 238 aa5.81□□□□□ -1.48
ATXN3-245ENST00000556958 RAD54LQ92698 747 aa5.81□□□□□ -1.48
ATXN3-245ENST00000556958 TAF4BQ92750 862 aa5.81□□□□□ -1.48
ATXN3-245ENST00000556958 TSACCQ96A04 125 aaPredicted RBP5.81□□□□□ -1.48
ATXN3-245ENST00000556958 RAB7BQ96AH8 199 aa5.81□□□□□ -1.48
ATXN3-245ENST00000556958 ARHGEF26Q96DR7 871 aa5.81□□□□□ -1.48
ATXN3-245ENST00000556958 C8orf76Q96K31 380 aa5.81□□□□□ -1.48
ATXN3-245ENST00000556958 CTRCQ99895 268 aa5.81□□□□□ -1.48
ATXN3-245ENST00000556958 TRIM55Q9BYV6 548 aa5.81□□□□□ -1.48
ATXN3-245ENST00000556958 MCCC2Q9HCC0 563 aa5.81□□□□□ -1.48
ATXN3-245ENST00000556958 FAM13BQ9NYF5 915 aa5.81□□□□□ -1.48
ATXN3-245ENST00000556958 SUCOQ9UBS9 1254 aaKnown RBP5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms