RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 HEATR9A2RTY3 570 aa23.9■■□□□ 1.42
SIX4-203ENST00000556952 TBC1D3BA6NDS4 549 aa23.9■■□□□ 1.42
SIX4-203ENST00000556952 WASH3PC4AMC7 463 aa23.9■■□□□ 1.42
SIX4-203ENST00000556952 HTRA2O43464 458 aaPredicted RBP23.9■■□□□ 1.42
SIX4-203ENST00000556952 POP4O95707 220 aaKnown RBP23.9■■□□□ 1.42
SIX4-203ENST00000556952 PRLP01236 227 aa23.9■■□□□ 1.42
SIX4-203ENST00000556952 APODP05090 189 aa23.9■■□□□ 1.42
SIX4-203ENST00000556952 RPL26P61254 145 aaKnown RBP23.9■■□□□ 1.42
SIX4-203ENST00000556952 MSLNQ13421 630 aaPredicted RBP23.9■■□□□ 1.42
SIX4-203ENST00000556952 LAMB3Q13751 1172 aa23.9■■□□□ 1.42
SIX4-203ENST00000556952 E2F5Q15329 346 aa23.9■■□□□ 1.42
SIX4-203ENST00000556952 HSP90B2PQ58FF3 399 aa23.9■■□□□ 1.42
SIX4-203ENST00000556952 ARMC12Q5T9G4 340 aa23.9■■□□□ 1.42
SIX4-203ENST00000556952 PKN3Q6P5Z2 889 aa23.9■■□□□ 1.42
SIX4-203ENST00000556952 TPRG1Q6ZUI0 275 aa23.9■■□□□ 1.42
SIX4-203ENST00000556952 Q6ZVU0 165 aa23.9■■□□□ 1.42
SIX4-203ENST00000556952 OR6K2Q8NGY2 324 aa23.9■■□□□ 1.42
SIX4-203ENST00000556952 CYTH2Q99418 400 aa23.9■■□□□ 1.42
SIX4-203ENST00000556952 RPL26L1Q9UNX3 145 aaKnown RBP23.9■■□□□ 1.42
SIX4-203ENST00000556952 PIAS3Q9Y6X2 628 aa23.9■■□□□ 1.42
SIX4-203ENST00000556952 TRAFD1O14545 582 aaPredicted RBP23.89■■□□□ 1.41
SIX4-203ENST00000556952 ALDH1A2O94788 518 aa23.89■■□□□ 1.41
SIX4-203ENST00000556952 MYZAPP0CAP1 466 aa23.89■■□□□ 1.41
SIX4-203ENST00000556952 CD72P21854 359 aa23.89■■□□□ 1.41
SIX4-203ENST00000556952 PRKCHP24723 683 aa23.89■■□□□ 1.41
SIX4-203ENST00000556952 KRT71Q3SY84 523 aa23.89■■□□□ 1.41
SIX4-203ENST00000556952 ZNF449Q6P9G9 518 aa23.89■■□□□ 1.41
SIX4-203ENST00000556952 OR2A12Q8NGT7 310 aa23.89■■□□□ 1.41
SIX4-203ENST00000556952 ZNF669Q96BR6 464 aaPredicted RBP23.89■■□□□ 1.41
SIX4-203ENST00000556952 RMDN1Q96DB5 314 aa23.89■■□□□ 1.41
SIX4-203ENST00000556952 TRIM56Q9BRZ2 755 aaKnown RBP23.89■■□□□ 1.41
SIX4-203ENST00000556952 TTC34A8MYJ7 566 aa23.88■■□□□ 1.41
SIX4-203ENST00000556952 RASGRF2O14827 1237 aa23.88■■□□□ 1.41
SIX4-203ENST00000556952 GPR37L1O60883 481 aa23.88■■□□□ 1.41
SIX4-203ENST00000556952 PGLSO95336 258 aa23.88■■□□□ 1.41
SIX4-203ENST00000556952 GRIA4P48058 902 aa23.88■■□□□ 1.41
SIX4-203ENST00000556952 ANKRD20A4Q4UJ75 823 aa23.88■■□□□ 1.41
SIX4-203ENST00000556952 NAIF1Q69YI7 327 aaPredicted RBP23.88■■□□□ 1.41
SIX4-203ENST00000556952 CWF19L1Q69YN2 538 aaKnown RBP23.88■■□□□ 1.41
SIX4-203ENST00000556952 DPY19L3Q6ZPD9 716 aa23.88■■□□□ 1.41
SIX4-203ENST00000556952 NLRP9Q7RTR0 991 aa23.88■■□□□ 1.41
SIX4-203ENST00000556952 SERBP1Q8NC51 408 aaKnown RBP eCLIP23.88■■□□□ 1.41
SIX4-203ENST00000556952 LPCAT1Q8NF37 534 aa23.88■■□□□ 1.41
SIX4-203ENST00000556952 PDCD6IPQ8WUM4 868 aaKnown RBP23.88■■□□□ 1.41
SIX4-203ENST00000556952 TBC1D17Q9HA65 648 aa23.88■■□□□ 1.41
SIX4-203ENST00000556952 CHRAC1Q9NRG0 131 aa23.88■■□□□ 1.41
SIX4-203ENST00000556952 FAM169AQ9Y6X4 670 aa23.88■■□□□ 1.41
SIX4-203ENST00000556952 KMT2EQ8IZD2 1858 aa23.88■■□□□ 1.41
SIX4-203ENST00000556952 A0A1W2PQ67 120 aa23.87■■□□□ 1.41
SIX4-203ENST00000556952 ANKRD66B4E2M5 251 aa23.87■■□□□ 1.41
SIX4-203ENST00000556952 PIGNO95427 931 aa23.87■■□□□ 1.41
SIX4-203ENST00000556952 PDHA1P08559 390 aa23.87■■□□□ 1.41
SIX4-203ENST00000556952 STARD6P59095 220 aa23.87■■□□□ 1.41
SIX4-203ENST00000556952 PRKCQQ04759 706 aa23.87■■□□□ 1.41
SIX4-203ENST00000556952 FNDC3BQ53EP0 1204 aaKnown RBP23.87■■□□□ 1.41
SIX4-203ENST00000556952 TXNDC11Q6PKC3 985 aa23.87■■□□□ 1.41
SIX4-203ENST00000556952 CAMK1DQ8IU85 385 aa23.87■■□□□ 1.41
SIX4-203ENST00000556952 RIBC1Q8N443 379 aaPredicted RBP23.87■■□□□ 1.41
SIX4-203ENST00000556952 FLCNQ8NFG4 579 aa23.87■■□□□ 1.41
SIX4-203ENST00000556952 EPS8L3Q8TE67 593 aaKnown RBP23.87■■□□□ 1.41
SIX4-203ENST00000556952 PBXIP1Q96AQ6 731 aa23.87■■□□□ 1.41
SIX4-203ENST00000556952 ZNF641Q96N77 438 aaPredicted RBP23.87■■□□□ 1.41
SIX4-203ENST00000556952 C1QTNF1Q9BXJ1 281 aa23.87■■□□□ 1.41
SIX4-203ENST00000556952 MOCS1Q9NZB8 636 aa23.87■■□□□ 1.41
SIX4-203ENST00000556952 SLC24A2Q9UI40 661 aa23.87■■□□□ 1.41
SIX4-203ENST00000556952 PCDHB9Q9Y5E1 797 aa23.87■■□□□ 1.41
SIX4-203ENST00000556952 BNIP3LO60238 219 aa23.86■■□□□ 1.41
SIX4-203ENST00000556952 PAPSS2O95340 614 aaPredicted RBP23.86■■□□□ 1.41
SIX4-203ENST00000556952 SYF2O95926 243 aaKnown RBP23.86■■□□□ 1.41
SIX4-203ENST00000556952 SEPT6Q14141 434 aa23.86■■□□□ 1.41
SIX4-203ENST00000556952 LONRF1Q17RB8 773 aa23.86■■□□□ 1.41
SIX4-203ENST00000556952 TMEM31Q5JXX7 168 aa23.86■■□□□ 1.41
SIX4-203ENST00000556952 BMP8AQ7Z5Y6 402 aa23.86■■□□□ 1.41
SIX4-203ENST00000556952 TDRPQ86YL5 185 aa23.86■■□□□ 1.41
SIX4-203ENST00000556952 BRSK1Q8TDC3 778 aa23.86■■□□□ 1.41
SIX4-203ENST00000556952 SPOCK2Q92563 424 aa23.86■■□□□ 1.41
SIX4-203ENST00000556952 PEX13Q92968 403 aa23.86■■□□□ 1.41
SIX4-203ENST00000556952 LRIG1Q96JA1 1093 aa23.86■■□□□ 1.41
SIX4-203ENST00000556952 P2RY13Q9BPV8 354 aa23.86■■□□□ 1.41
SIX4-203ENST00000556952 HEPHQ9BQS7 1158 aa23.86■■□□□ 1.41
SIX4-203ENST00000556952 FOXQ1Q9C009 403 aa23.86■■□□□ 1.41
SIX4-203ENST00000556952 MFSD1Q9H3U5 465 aa23.86■■□□□ 1.41
SIX4-203ENST00000556952 ZDHHC6Q9H6R6 413 aa23.86■■□□□ 1.41
SIX4-203ENST00000556952 C8orf33Q9H7E9 229 aaPredicted RBP23.86■■□□□ 1.41
SIX4-203ENST00000556952 FAM53CQ9NYF3 392 aa23.86■■□□□ 1.41
SIX4-203ENST00000556952 STARD13Q9Y3M8 1113 aa23.86■■□□□ 1.41
SIX4-203ENST00000556952 ZCWPW2A0A1B0GU75 182 aa23.86■■□□□ 1.41
SIX4-203ENST00000556952 SPECC1L-ADORA2AF8WAN1 911 aa23.86■■□□□ 1.41
SIX4-203ENST00000556952 CDH16O75309 829 aa23.86■■□□□ 1.41
SIX4-203ENST00000556952 C1QAP02745 245 aa23.86■■□□□ 1.41
SIX4-203ENST00000556952 CTHP32929 405 aa23.86■■□□□ 1.41
SIX4-203ENST00000556952 EPHB1P54762 984 aa23.86■■□□□ 1.41
SIX4-203ENST00000556952 ZNF234Q14588 700 aa23.86■■□□□ 1.41
SIX4-203ENST00000556952 RASA2Q15283 850 aa23.86■■□□□ 1.41
SIX4-203ENST00000556952 KBTBD12Q3ZCT8 623 aa23.86■■□□□ 1.41
SIX4-203ENST00000556952 RALGPS2Q86X27 583 aaPredicted RBP23.86■■□□□ 1.41
SIX4-203ENST00000556952 BLOC1S5Q8TDH9 187 aa23.86■■□□□ 1.41
SIX4-203ENST00000556952 VOPP1Q96AW1 172 aa23.86■■□□□ 1.41
SIX4-203ENST00000556952 ECHDC3Q96DC8 303 aa23.86■■□□□ 1.41
SIX4-203ENST00000556952 MFSD3Q96ES6 412 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms