RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 RP1P56715 2156 aa12.91□□□□□ -0.34
PSEN1-219ENST00000556951 LRRK1Q38SD2 2015 aa12.91□□□□□ -0.34
PSEN1-219ENST00000556951 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.9□□□□□ -0.34
PSEN1-219ENST00000556951 CPED1A4D0V7 1026 aa12.9□□□□□ -0.34
PSEN1-219ENST00000556951 NEMP2A6NFY4 417 aa12.9□□□□□ -0.34
PSEN1-219ENST00000556951 GOLGA8SH3BPF8 625 aa12.9□□□□□ -0.34
PSEN1-219ENST00000556951 SLU7O95391 586 aaKnown RBP12.9□□□□□ -0.34
PSEN1-219ENST00000556951 MOCS2O96007 188 aaPredicted RBP12.9□□□□□ -0.34
PSEN1-219ENST00000556951 ALPPL2P10696 532 aa12.9□□□□□ -0.34
PSEN1-219ENST00000556951 COMTP21964 271 aa12.9□□□□□ -0.34
PSEN1-219ENST00000556951 MAN1A1P33908 653 aa12.9□□□□□ -0.34
PSEN1-219ENST00000556951 NNMTP40261 264 aa12.9□□□□□ -0.34
PSEN1-219ENST00000556951 SULT2A1Q06520 285 aa12.9□□□□□ -0.34
PSEN1-219ENST00000556951 ZNF177Q13360 481 aaPredicted RBP12.9□□□□□ -0.34
PSEN1-219ENST00000556951 FGL2Q14314 439 aa12.9□□□□□ -0.34
PSEN1-219ENST00000556951 CDKN3Q16667 212 aa12.9□□□□□ -0.34
PSEN1-219ENST00000556951 SKIDA1Q1XH10 827 aa12.9□□□□□ -0.34
PSEN1-219ENST00000556951 ZC3H12AQ5D1E8 599 aaKnown RBP12.9□□□□□ -0.34
PSEN1-219ENST00000556951 TPRG1LQ5T0D9 272 aa12.9□□□□□ -0.34
PSEN1-219ENST00000556951 OR6B2Q6IFH4 312 aa12.9□□□□□ -0.34
PSEN1-219ENST00000556951 Q6ZSR6 202 aa12.9□□□□□ -0.34
PSEN1-219ENST00000556951 Q6ZVU0 165 aa12.9□□□□□ -0.34
PSEN1-219ENST00000556951 EFL1Q7Z2Z2 1120 aaKnown RBP12.9□□□□□ -0.34
PSEN1-219ENST00000556951 HORMAD1Q86X24 394 aa12.9□□□□□ -0.34
PSEN1-219ENST00000556951 CIR1Q86X95 450 aaPredicted RBP12.9□□□□□ -0.34
PSEN1-219ENST00000556951 CCDC117Q8IWD4 279 aaPredicted RBP12.9□□□□□ -0.34
PSEN1-219ENST00000556951 UBL4BQ8N7F7 174 aa12.9□□□□□ -0.34
PSEN1-219ENST00000556951 CEP112Q8N8E3 955 aa12.9□□□□□ -0.34
PSEN1-219ENST00000556951 BTBD6Q96KE9 485 aa12.9□□□□□ -0.34
PSEN1-219ENST00000556951 DUSP23Q9BVJ7 150 aa12.9□□□□□ -0.34
PSEN1-219ENST00000556951 GOLPH3Q9H4A6 298 aa12.9□□□□□ -0.34
PSEN1-219ENST00000556951 RNF14Q9UBS8 474 aa12.9□□□□□ -0.34
PSEN1-219ENST00000556951 ATXN7L1Q9ULK2 861 aaPredicted RBP12.9□□□□□ -0.34
PSEN1-219ENST00000556951 HS3ST3A1Q9Y663 406 aa12.9□□□□□ -0.34
PSEN1-219ENST00000556951 CSNK1G3Q9Y6M4 447 aa12.9□□□□□ -0.34
PSEN1-219ENST00000556951 TYW5A2RUC4 315 aaKnown RBP12.89□□□□□ -0.35
PSEN1-219ENST00000556951 POM121BA6NF01 834 aa12.89□□□□□ -0.35
PSEN1-219ENST00000556951 E5RJQ4 531 aa12.89□□□□□ -0.35
PSEN1-219ENST00000556951 ALOX15BO15296 676 aa12.89□□□□□ -0.35
PSEN1-219ENST00000556951 SPOPO43791 374 aa12.89□□□□□ -0.35
PSEN1-219ENST00000556951 SRGAP2O75044 1071 aa12.89□□□□□ -0.35
PSEN1-219ENST00000556951 TNFSF15O95150 251 aa12.89□□□□□ -0.35
PSEN1-219ENST00000556951 CSF2P04141 144 aa12.89□□□□□ -0.35
PSEN1-219ENST00000556951 HNRNPA2B1P22626 353 aaKnown RBP12.89□□□□□ -0.35
PSEN1-219ENST00000556951 CTNNA2P26232 953 aa12.89□□□□□ -0.35
PSEN1-219ENST00000556951 SCNN1AP37088 669 aa12.89□□□□□ -0.35
PSEN1-219ENST00000556951 DCTP40126 519 aa12.89□□□□□ -0.35
PSEN1-219ENST00000556951 MLLT3P42568 568 aaPredicted RBP12.89□□□□□ -0.35
PSEN1-219ENST00000556951 IRAK1P51617 712 aa12.89□□□□□ -0.35
PSEN1-219ENST00000556951 HNRNPKP61978 463 aaKnown RBP eCLIP12.89□□□□□ -0.35
PSEN1-219ENST00000556951 PITX1P78337 314 aaPredicted RBP12.89□□□□□ -0.35
PSEN1-219ENST00000556951 SLC6A3Q01959 620 aa12.89□□□□□ -0.35
PSEN1-219ENST00000556951 CKAP4Q07065 602 aaKnown RBP12.89□□□□□ -0.35
PSEN1-219ENST00000556951 PIGHQ14442 188 aaPredicted RBP12.89□□□□□ -0.35
PSEN1-219ENST00000556951 TGIF1Q15583 401 aa12.89□□□□□ -0.35
PSEN1-219ENST00000556951 TMEM259Q4ZIN3 620 aa12.89□□□□□ -0.35
PSEN1-219ENST00000556951 SEL1L3Q68CR1 1132 aa12.89□□□□□ -0.35
PSEN1-219ENST00000556951 ZCCHC8Q6NZY4 707 aaKnown RBP12.89□□□□□ -0.35
PSEN1-219ENST00000556951 CRTC1Q6UUV9 634 aa12.89□□□□□ -0.35
PSEN1-219ENST00000556951 DSG4Q86SJ6 1040 aa12.89□□□□□ -0.35
PSEN1-219ENST00000556951 TAC4Q86UU9 113 aa12.89□□□□□ -0.35
PSEN1-219ENST00000556951 MNS1Q8NEH6 495 aa12.89□□□□□ -0.35
PSEN1-219ENST00000556951 ZNF548Q8NEK5 533 aaPredicted RBP12.89□□□□□ -0.35
PSEN1-219ENST00000556951 MYRIPQ8NFW9 859 aa12.89□□□□□ -0.35
PSEN1-219ENST00000556951 WDR36Q8NI36 951 aaKnown RBP12.89□□□□□ -0.35
PSEN1-219ENST00000556951 NANOS1Q8WY41 292 aaKnown RBP12.89□□□□□ -0.35
PSEN1-219ENST00000556951 SERPINB11Q96P15 392 aa12.89□□□□□ -0.35
PSEN1-219ENST00000556951 CARD6Q9BX69 1037 aa12.89□□□□□ -0.35
PSEN1-219ENST00000556951 TRIM7Q9C029 511 aa12.89□□□□□ -0.35
PSEN1-219ENST00000556951 DNAJC28Q9NX36 388 aa12.89□□□□□ -0.35
PSEN1-219ENST00000556951 PACSIN2Q9UNF0 486 aaPredicted RBP12.89□□□□□ -0.35
PSEN1-219ENST00000556951 AKAP9Q99996 3911 aa12.88□□□□□ -0.35
PSEN1-219ENST00000556951 SPTY2D1-AS1A0A0U1RR47 76 aa12.88□□□□□ -0.35
PSEN1-219ENST00000556951 CCDC66A2RUB6 948 aa12.88□□□□□ -0.35
PSEN1-219ENST00000556951 RAD51BO15315 384 aa12.88□□□□□ -0.35
PSEN1-219ENST00000556951 DDX3YO15523 660 aaKnown RBP12.88□□□□□ -0.35
PSEN1-219ENST00000556951 GJB6O95452 261 aa12.88□□□□□ -0.35
PSEN1-219ENST00000556951 MT-CO1P00395 513 aa12.88□□□□□ -0.35
PSEN1-219ENST00000556951 IGLV3-25P01717 112 aa12.88□□□□□ -0.35
PSEN1-219ENST00000556951 NME1P15531 152 aaKnown RBP12.88□□□□□ -0.35
PSEN1-219ENST00000556951 AKT2P31751 481 aa12.88□□□□□ -0.35
PSEN1-219ENST00000556951 RFC1P35251 1148 aaPredicted RBP12.88□□□□□ -0.35
PSEN1-219ENST00000556951 CASRP41180 1078 aa12.88□□□□□ -0.35
PSEN1-219ENST00000556951 RPL7AP62424 266 aaKnown RBP12.88□□□□□ -0.35
PSEN1-219ENST00000556951 TUBB4BP68371 445 aa12.88□□□□□ -0.35
PSEN1-219ENST00000556951 ACCSLQ4AC99 568 aa12.88□□□□□ -0.35
PSEN1-219ENST00000556951 FOXR1Q6PIV2 292 aa12.88□□□□□ -0.35
PSEN1-219ENST00000556951 RBM44Q6ZP01 1051 aaKnown RBP12.88□□□□□ -0.35
PSEN1-219ENST00000556951 FAM183BPQ6ZVS7 135 aa12.88□□□□□ -0.35
PSEN1-219ENST00000556951 ZC3H18Q86VM9 953 aaKnown RBP12.88□□□□□ -0.35
PSEN1-219ENST00000556951 CHSY1Q86X52 802 aa12.88□□□□□ -0.35
PSEN1-219ENST00000556951 CREG2Q8IUH2 290 aa12.88□□□□□ -0.35
PSEN1-219ENST00000556951 ARL14Q8N4G2 192 aa12.88□□□□□ -0.35
PSEN1-219ENST00000556951 SH2D3CQ8N5H7 860 aa12.88□□□□□ -0.35
PSEN1-219ENST00000556951 NIPA2Q8N8Q9 360 aa12.88□□□□□ -0.35
PSEN1-219ENST00000556951 FNIP1Q8TF40 1166 aa12.88□□□□□ -0.35
PSEN1-219ENST00000556951 COG1Q8WTW3 980 aa12.88□□□□□ -0.35
PSEN1-219ENST00000556951 MCEEQ96PE7 176 aa12.88□□□□□ -0.35
PSEN1-219ENST00000556951 FEM1AQ9BSK4 669 aa12.88□□□□□ -0.35
PSEN1-219ENST00000556951 PCDHA3Q9Y5H8 950 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms