RNA–Protein interactions for RNA: ENST00000556916.5

FOXN3-213, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-213ENST00000556916 SLC9C1Q4G0N8 1177 aa3.92□□□□□ -1.78
FOXN3-213ENST00000556916 TEDDM1Q5T9Z0 273 aa3.92□□□□□ -1.78
FOXN3-213ENST00000556916 CACHD1Q5VU97 1274 aa3.92□□□□□ -1.78
FOXN3-213ENST00000556916 DENND2CQ68D51 928 aa3.92□□□□□ -1.78
FOXN3-213ENST00000556916 USP49Q70CQ1 688 aa3.92□□□□□ -1.78
FOXN3-213ENST00000556916 INTS8Q75QN2 995 aaKnown RBP3.92□□□□□ -1.78
FOXN3-213ENST00000556916 CCDC80Q76M96 950 aa3.92□□□□□ -1.78
FOXN3-213ENST00000556916 VSIG1Q86XK7 387 aa3.92□□□□□ -1.78
FOXN3-213ENST00000556916 C2CD5Q86YS7 1000 aa3.92□□□□□ -1.78
FOXN3-213ENST00000556916 LIX1LQ8IVB5 337 aa3.92□□□□□ -1.78
FOXN3-213ENST00000556916 NME8Q8N427 588 aa3.92□□□□□ -1.78
FOXN3-213ENST00000556916 ZBTB8BQ8NAP8 495 aaPredicted RBP3.92□□□□□ -1.78
FOXN3-213ENST00000556916 SMYD1Q8NB12 490 aa3.92□□□□□ -1.78
FOXN3-213ENST00000556916 TBC1D16Q8TBP0 767 aa3.92□□□□□ -1.78
FOXN3-213ENST00000556916 DENND1AQ8TEH3 1009 aa3.92□□□□□ -1.78
FOXN3-213ENST00000556916 XAGE5Q8WWM1 108 aa3.92□□□□□ -1.78
FOXN3-213ENST00000556916 RSPH1Q8WYR4 309 aa3.92□□□□□ -1.78
FOXN3-213ENST00000556916 SYN2Q92777 582 aaPredicted RBP3.92□□□□□ -1.78
FOXN3-213ENST00000556916 AZIN2Q96A70 460 aa3.92□□□□□ -1.78
FOXN3-213ENST00000556916 ZNF653Q96CK0 615 aa3.92□□□□□ -1.78
FOXN3-213ENST00000556916 MS4A14Q96JA4 679 aa3.92□□□□□ -1.78
FOXN3-213ENST00000556916 CNOT6LQ96LI5 555 aaKnown RBP3.92□□□□□ -1.78
FOXN3-213ENST00000556916 SMC6Q96SB8 1091 aa3.92□□□□□ -1.78
FOXN3-213ENST00000556916 TSPAN18Q96SJ8 248 aa3.92□□□□□ -1.78
FOXN3-213ENST00000556916 TBCBQ99426 244 aa3.92□□□□□ -1.78
FOXN3-213ENST00000556916 PSMB7Q99436 277 aa3.92□□□□□ -1.78
FOXN3-213ENST00000556916 FMO2Q99518 471 aa3.92□□□□□ -1.78
FOXN3-213ENST00000556916 PRMT1Q99873 361 aaKnown RBP3.92□□□□□ -1.78
FOXN3-213ENST00000556916 SLX1AQ9BQ83 275 aa3.92□□□□□ -1.78
FOXN3-213ENST00000556916 C17orf80Q9BSJ5 609 aa3.92□□□□□ -1.78
FOXN3-213ENST00000556916 SARGQ9BW04 601 aa3.92□□□□□ -1.78
FOXN3-213ENST00000556916 ROPN1BQ9BZX4 212 aaPredicted RBP3.92□□□□□ -1.78
FOXN3-213ENST00000556916 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.92□□□□□ -1.78
FOXN3-213ENST00000556916 ZMYND12Q9H0C1 365 aa3.92□□□□□ -1.78
FOXN3-213ENST00000556916 ZCWPW1Q9H0M4 648 aa3.92□□□□□ -1.78
FOXN3-213ENST00000556916 LRMDAQ9H2I8 198 aa3.92□□□□□ -1.78
FOXN3-213ENST00000556916 RANBP17Q9H2T7 1088 aaKnown RBP3.92□□□□□ -1.78
FOXN3-213ENST00000556916 ROPN1Q9HAT0 212 aaPredicted RBP3.92□□□□□ -1.78
FOXN3-213ENST00000556916 GLOD4Q9HC38 313 aa3.92□□□□□ -1.78
FOXN3-213ENST00000556916 TBC1D23Q9NUY8 699 aa3.92□□□□□ -1.78
FOXN3-213ENST00000556916 SMARCAL1Q9NZC9 954 aa3.92□□□□□ -1.78
FOXN3-213ENST00000556916 NKX1-2Q9UD57 310 aaPredicted RBP3.92□□□□□ -1.78
FOXN3-213ENST00000556916 DDX25Q9UHL0 483 aaKnown RBP3.92□□□□□ -1.78
FOXN3-213ENST00000556916 RASAL2Q9UJF2 1139 aa3.92□□□□□ -1.78
FOXN3-213ENST00000556916 HDAC9Q9UKV0 1011 aa3.92□□□□□ -1.78
FOXN3-213ENST00000556916 PAIP2BQ9ULR5 123 aaKnown RBP3.92□□□□□ -1.78
FOXN3-213ENST00000556916 ZNF510Q9Y2H8 683 aa3.92□□□□□ -1.78
FOXN3-213ENST00000556916 SCN4AP35499 1836 aa3.92□□□□□ -1.78
FOXN3-213ENST00000556916 DIP2BQ9P265 1576 aa3.92□□□□□ -1.78
FOXN3-213ENST00000556916 ATP8B3O60423 1300 aa3.92□□□□□ -1.78
FOXN3-213ENST00000556916 C1orf167Q5SNV9 1468 aa3.92□□□□□ -1.78
FOXN3-213ENST00000556916 LOXHD1Q8IVV2 1947 aa3.91□□□□□ -1.78
FOXN3-213ENST00000556916 ZNFX1Q9P2E3 1918 aaKnown RBP3.91□□□□□ -1.78
FOXN3-213ENST00000556916 HEG1Q9ULI3 1381 aa3.91□□□□□ -1.78
FOXN3-213ENST00000556916 ALS2Q96Q42 1657 aa3.91□□□□□ -1.78
FOXN3-213ENST00000556916 ARFGEF1Q9Y6D6 1849 aa3.91□□□□□ -1.78
FOXN3-213ENST00000556916 MYH9P35579 1960 aaKnown RBP3.91□□□□□ -1.78
FOXN3-213ENST00000556916 TRIM49BA6NDI0 452 aa3.91□□□□□ -1.78
FOXN3-213ENST00000556916 TMEM221A6NGB7 291 aa3.91□□□□□ -1.78
FOXN3-213ENST00000556916 RHPN2P1A8MT19 583 aa3.91□□□□□ -1.78
FOXN3-213ENST00000556916 BTBD19C9JJ37 291 aa3.91□□□□□ -1.78
FOXN3-213ENST00000556916 MAPK13O15264 365 aa3.91□□□□□ -1.78
FOXN3-213ENST00000556916 PMM2O15305 246 aa3.91□□□□□ -1.78
FOXN3-213ENST00000556916 KCNAB3O43448 404 aa3.91□□□□□ -1.78
FOXN3-213ENST00000556916 ATP9AO75110 1047 aa3.91□□□□□ -1.78
FOXN3-213ENST00000556916 ATRNO75882 1429 aa3.91□□□□□ -1.78
FOXN3-213ENST00000556916 DCTN3O75935 186 aa3.91□□□□□ -1.78
FOXN3-213ENST00000556916 JTBO76095 146 aa3.91□□□□□ -1.78
FOXN3-213ENST00000556916 PDE8BO95263 885 aa3.91□□□□□ -1.78
FOXN3-213ENST00000556916 SERPING1P05155 500 aa3.91□□□□□ -1.78
FOXN3-213ENST00000556916 PLEKP08567 350 aaPredicted RBP3.91□□□□□ -1.78
FOXN3-213ENST00000556916 CYP2D6P10635 497 aa3.91□□□□□ -1.78
FOXN3-213ENST00000556916 HGFP14210 728 aa3.91□□□□□ -1.78
FOXN3-213ENST00000556916 HOXB6P17509 224 aaKnown RBP3.91□□□□□ -1.78
FOXN3-213ENST00000556916 CASP1P29466 404 aa3.91□□□□□ -1.78
FOXN3-213ENST00000556916 LONP1P36776 959 aaKnown RBP3.91□□□□□ -1.78
FOXN3-213ENST00000556916 IL15P40933 162 aaPredicted RBP3.91□□□□□ -1.78
FOXN3-213ENST00000556916 TRAPPC10P48553 1259 aa3.91□□□□□ -1.78
FOXN3-213ENST00000556916 PTDSS1P48651 473 aaKnown RBP3.91□□□□□ -1.78
FOXN3-213ENST00000556916 TUBP50607 506 aa3.91□□□□□ -1.78
FOXN3-213ENST00000556916 RNASELQ05823 741 aaKnown RBP3.91□□□□□ -1.78
FOXN3-213ENST00000556916 SULT2A1Q06520 285 aa3.91□□□□□ -1.78
FOXN3-213ENST00000556916 ITGA9Q13797 1035 aa3.91□□□□□ -1.78
FOXN3-213ENST00000556916 RCN2Q14257 317 aa3.91□□□□□ -1.78
FOXN3-213ENST00000556916 KCNAB1Q14722 419 aa3.91□□□□□ -1.78
FOXN3-213ENST00000556916 TRADDQ15628 312 aa3.91□□□□□ -1.78
FOXN3-213ENST00000556916 NPY5RQ15761 445 aa3.91□□□□□ -1.78
FOXN3-213ENST00000556916 ASTE1Q2TB18 679 aaPredicted RBP3.91□□□□□ -1.78
FOXN3-213ENST00000556916 CNPY1Q3B7I2 92 aa3.91□□□□□ -1.78
FOXN3-213ENST00000556916 RABL6Q3YEC7 729 aaPredicted RBP3.91□□□□□ -1.78
FOXN3-213ENST00000556916 KBTBD12Q3ZCT8 623 aa3.91□□□□□ -1.78
FOXN3-213ENST00000556916 TDRD12Q587J7 1177 aaKnown RBP3.91□□□□□ -1.78
FOXN3-213ENST00000556916 CEP78Q5JTW2 689 aa3.91□□□□□ -1.78
FOXN3-213ENST00000556916 ZNF618Q5T7W0 954 aa3.91□□□□□ -1.78
FOXN3-213ENST00000556916 PRAMEF17Q5VTA0 474 aa3.91□□□□□ -1.78
FOXN3-213ENST00000556916 SFMBT2Q5VUG0 894 aa3.91□□□□□ -1.78
FOXN3-213ENST00000556916 DAB2IPQ5VWQ8 1189 aa3.91□□□□□ -1.78
FOXN3-213ENST00000556916 ARL6IP4Q66PJ3 421 aaKnown RBP3.91□□□□□ -1.78
FOXN3-213ENST00000556916 FCRL6Q6DN72 434 aa3.91□□□□□ -1.78
FOXN3-213ENST00000556916 SLC18B1Q6NT16 456 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms