RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 DHX8Q14562 1220 aaKnown RBP5.53□□□□□ -1.52
HIF1A-209ENST00000556827 KCTD2Q14681 263 aa5.53□□□□□ -1.52
HIF1A-209ENST00000556827 INO80DQ53TQ3 878 aaPredicted RBP5.53□□□□□ -1.52
HIF1A-209ENST00000556827 C10orf25Q5T742 122 aa5.53□□□□□ -1.52
HIF1A-209ENST00000556827 TMEM179Q6ZVK1 233 aa5.53□□□□□ -1.52
HIF1A-209ENST00000556827 ADGRA1Q86SQ6 560 aa5.53□□□□□ -1.52
HIF1A-209ENST00000556827 AACSQ86V21 672 aa5.53□□□□□ -1.52
HIF1A-209ENST00000556827 UEVLDQ8IX04 471 aa5.53□□□□□ -1.52
HIF1A-209ENST00000556827 ACER1Q8TDN7 264 aa5.53□□□□□ -1.52
HIF1A-209ENST00000556827 BADQ92934 168 aa5.53□□□□□ -1.52
HIF1A-209ENST00000556827 CDX2Q99626 313 aaPredicted RBP5.53□□□□□ -1.52
HIF1A-209ENST00000556827 MOV10L1Q9BXT6 1211 aaKnown RBP5.53□□□□□ -1.52
HIF1A-209ENST00000556827 SPATC1LQ9H0A9 340 aa5.53□□□□□ -1.52
HIF1A-209ENST00000556827 NDUFAF4Q9P032 175 aa5.53□□□□□ -1.52
HIF1A-209ENST00000556827 SWAP70Q9UH65 585 aa5.53□□□□□ -1.52
HIF1A-209ENST00000556827 NRBP1Q9UHY1 535 aa5.53□□□□□ -1.52
HIF1A-209ENST00000556827 ZSWIM8A7E2V4 1837 aa5.53□□□□□ -1.52
HIF1A-209ENST00000556827 CYP3A7-CYP3A51PA0A087WV96 503 aa5.52□□□□□ -1.53
HIF1A-209ENST00000556827 MBD3L5A6NJ08 208 aaPredicted RBP5.52□□□□□ -1.53
HIF1A-209ENST00000556827 INSIG1O15503 277 aa5.52□□□□□ -1.53
HIF1A-209ENST00000556827 HMMRO75330 724 aa5.52□□□□□ -1.53
HIF1A-209ENST00000556827 CNMDO75829 334 aa5.52□□□□□ -1.53
HIF1A-209ENST00000556827 CLTBP09497 229 aa5.52□□□□□ -1.53
HIF1A-209ENST00000556827 LYL1P12980 280 aa5.52□□□□□ -1.53
HIF1A-209ENST00000556827 CYBAP13498 195 aa5.52□□□□□ -1.53
HIF1A-209ENST00000556827 PRF1P14222 555 aa5.52□□□□□ -1.53
HIF1A-209ENST00000556827 AKR1A1P14550 325 aa5.52□□□□□ -1.53
HIF1A-209ENST00000556827 FOSL2P15408 326 aa5.52□□□□□ -1.53
HIF1A-209ENST00000556827 IGFBP2P18065 325 aa5.52□□□□□ -1.53
HIF1A-209ENST00000556827 CYP3A7P24462 503 aa5.52□□□□□ -1.53
HIF1A-209ENST00000556827 FOXG1P55316 489 aaPredicted RBP5.52□□□□□ -1.53
HIF1A-209ENST00000556827 KRTAP10-9P60411 292 aa5.52□□□□□ -1.53
HIF1A-209ENST00000556827 ID2Q02363 134 aa5.52□□□□□ -1.53
HIF1A-209ENST00000556827 CFHR1Q03591 330 aa5.52□□□□□ -1.53
HIF1A-209ENST00000556827 STIM1Q13586 685 aa5.52□□□□□ -1.53
HIF1A-209ENST00000556827 SHHQ15465 462 aa5.52□□□□□ -1.53
HIF1A-209ENST00000556827 SHROOM1Q2M3G4 852 aaPredicted RBP5.52□□□□□ -1.53
HIF1A-209ENST00000556827 EARS2Q5JPH6 523 aaKnown RBP5.52□□□□□ -1.53
HIF1A-209ENST00000556827 ZNF474Q6S9Z5 364 aaPredicted RBP5.52□□□□□ -1.53
HIF1A-209ENST00000556827 TMEM57Q8N5G2 664 aa5.52□□□□□ -1.53
HIF1A-209ENST00000556827 EXD3Q8N9H8 876 aa5.52□□□□□ -1.53
HIF1A-209ENST00000556827 OR6Y1Q8NGX8 325 aa5.52□□□□□ -1.53
HIF1A-209ENST00000556827 AFG1LQ8WV93 481 aa5.52□□□□□ -1.53
HIF1A-209ENST00000556827 GUCD1Q96NT3 240 aa5.52□□□□□ -1.53
HIF1A-209ENST00000556827 SIGLEC11Q96RL6 698 aa5.52□□□□□ -1.53
HIF1A-209ENST00000556827 CHMP4BQ9H444 224 aaKnown RBP5.52□□□□□ -1.53
HIF1A-209ENST00000556827 SFXN1Q9H9B4 322 aa5.52□□□□□ -1.53
HIF1A-209ENST00000556827 CHODLQ9H9P2 273 aa5.52□□□□□ -1.53
HIF1A-209ENST00000556827 MOV10Q9HCE1 1003 aaKnown RBP5.52□□□□□ -1.53
HIF1A-209ENST00000556827 KIF17Q9P2E2 1029 aa5.52□□□□□ -1.53
HIF1A-209ENST00000556827 DBNLQ9UJU6 430 aaKnown RBP5.52□□□□□ -1.53
HIF1A-209ENST00000556827 AK9Q5TCS8 1911 aa5.52□□□□□ -1.53
HIF1A-209ENST00000556827 EMSYQ7Z589 1322 aa5.51□□□□□ -1.53
HIF1A-209ENST00000556827 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.51□□□□□ -1.53
HIF1A-209ENST00000556827 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.51□□□□□ -1.53
HIF1A-209ENST00000556827 C3orf70A6NLC5 250 aaPredicted RBP5.51□□□□□ -1.53
HIF1A-209ENST00000556827 CCER2I3L3R5 266 aa5.51□□□□□ -1.53
HIF1A-209ENST00000556827 WDR46O15213 610 aaKnown RBP5.51□□□□□ -1.53
HIF1A-209ENST00000556827 FAM155BO75949 473 aa5.51□□□□□ -1.53
HIF1A-209ENST00000556827 SHMT1P34896 483 aa5.51□□□□□ -1.53
HIF1A-209ENST00000556827 ADD2P35612 726 aa5.51□□□□□ -1.53
HIF1A-209ENST00000556827 CPA2P48052 419 aa5.51□□□□□ -1.53
HIF1A-209ENST00000556827 CDK7P50613 346 aa5.51□□□□□ -1.53
HIF1A-209ENST00000556827 B4GALNT1Q00973 533 aa5.51□□□□□ -1.53
HIF1A-209ENST00000556827 TLE2Q04725 743 aa5.51□□□□□ -1.53
HIF1A-209ENST00000556827 ARL13AQ5H913 290 aaPredicted RBP5.51□□□□□ -1.53
HIF1A-209ENST00000556827 DGAT2L7PQ6IED9 249 aa5.51□□□□□ -1.53
HIF1A-209ENST00000556827 ZSCAN25Q6NSZ9 544 aa5.51□□□□□ -1.53
HIF1A-209ENST00000556827 ZNF517Q6ZMY9 492 aaPredicted RBP5.51□□□□□ -1.53
HIF1A-209ENST00000556827 IRF2BP2Q7Z5L9 587 aa5.51□□□□□ -1.53
HIF1A-209ENST00000556827 ARL14EPQ8N8R7 260 aaPredicted RBP5.51□□□□□ -1.53
HIF1A-209ENST00000556827 HDHD5Q9BXW7 423 aa5.51□□□□□ -1.53
HIF1A-209ENST00000556827 MTIF3Q9H2K0 278 aaKnown RBP5.51□□□□□ -1.53
HIF1A-209ENST00000556827 FOXP1Q9H334 677 aaPredicted RBP5.51□□□□□ -1.53
HIF1A-209ENST00000556827 EBF3Q9H4W6 596 aa5.51□□□□□ -1.53
HIF1A-209ENST00000556827 VCPKMTQ9H867 229 aa5.51□□□□□ -1.53
HIF1A-209ENST00000556827 RMI1Q9H9A7 625 aa5.51□□□□□ -1.53
HIF1A-209ENST00000556827 PLEKHA2Q9HB19 425 aa5.51□□□□□ -1.53
HIF1A-209ENST00000556827 PDE11AQ9HCR9 933 aa5.51□□□□□ -1.53
HIF1A-209ENST00000556827 SAYSD1Q9NPB0 183 aa5.51□□□□□ -1.53
HIF1A-209ENST00000556827 ATP8A2Q9NTI2 1148 aa5.51□□□□□ -1.53
HIF1A-209ENST00000556827 FEM1BQ9UK73 627 aa5.51□□□□□ -1.53
HIF1A-209ENST00000556827 GPR52Q9Y2T5 361 aa5.51□□□□□ -1.53
HIF1A-209ENST00000556827 MROH7Q68CQ1 1323 aa5.5□□□□□ -1.53
HIF1A-209ENST00000556827 DOCK1Q14185 1865 aa5.5□□□□□ -1.53
HIF1A-209ENST00000556827 ZBED4O75132 1171 aa5.5□□□□□ -1.53
HIF1A-209ENST00000556827 RXRAP19793 462 aa5.5□□□□□ -1.53
HIF1A-209ENST00000556827 TGM2P21980 687 aa5.5□□□□□ -1.53
HIF1A-209ENST00000556827 AARSP49588 968 aaKnown RBP eCLIP5.5□□□□□ -1.53
HIF1A-209ENST00000556827 PGM5Q15124 567 aa5.5□□□□□ -1.53
HIF1A-209ENST00000556827 TBRG1Q3YBR2 411 aa5.5□□□□□ -1.53
HIF1A-209ENST00000556827 GLE1Q53GS7 698 aaKnown RBP5.5□□□□□ -1.53
HIF1A-209ENST00000556827 PRAMEF19Q5SWL8 479 aa5.5□□□□□ -1.53
HIF1A-209ENST00000556827 LIPMQ5VYY2 423 aa5.5□□□□□ -1.53
HIF1A-209ENST00000556827 TMEM88Q6PEY1 159 aa5.5□□□□□ -1.53
HIF1A-209ENST00000556827 CCDC129Q6ZRS4 1044 aa5.5□□□□□ -1.53
HIF1A-209ENST00000556827 MDGA2Q7Z553 956 aa5.5□□□□□ -1.53
HIF1A-209ENST00000556827 ANKRD13BQ86YJ7 626 aa5.5□□□□□ -1.53
HIF1A-209ENST00000556827 ADGRF4Q8IZF3 695 aa5.5□□□□□ -1.53
HIF1A-209ENST00000556827 TMEM199Q8N511 208 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms