RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 IFI35P80217 286 aaPredicted RBP22.7■■□□□ 1.22
PABPN1-206ENST00000556809 GRM3Q14832 879 aa22.7■■□□□ 1.22
PABPN1-206ENST00000556809 NOMO1Q15155 1222 aa22.7■■□□□ 1.22
PABPN1-206ENST00000556809 ZNF569Q5MCW4 686 aa22.7■■□□□ 1.22
PABPN1-206ENST00000556809 N4BP2L1Q5TBK1 243 aaPredicted RBP22.7■■□□□ 1.22
PABPN1-206ENST00000556809 KIAA1161Q6NSJ0 714 aa22.7■■□□□ 1.22
PABPN1-206ENST00000556809 B4GALNT4Q76KP1 1039 aa22.7■■□□□ 1.22
PABPN1-206ENST00000556809 ZC3H18Q86VM9 953 aaKnown RBP22.7■■□□□ 1.22
PABPN1-206ENST00000556809 IQCHQ86VS3 1027 aa22.7■■□□□ 1.22
PABPN1-206ENST00000556809 ACTL9Q8TC94 416 aa22.7■■□□□ 1.22
PABPN1-206ENST00000556809 HCAR2Q8TDS4 363 aa22.7■■□□□ 1.22
PABPN1-206ENST00000556809 TFB1MQ8WVM0 346 aaKnown RBP22.7■■□□□ 1.22
PABPN1-206ENST00000556809 KLK6Q92876 244 aa22.7■■□□□ 1.22
PABPN1-206ENST00000556809 TUBGCP5Q96RT8 1024 aa22.7■■□□□ 1.22
PABPN1-206ENST00000556809 HAUS2Q9NVX0 235 aa22.7■■□□□ 1.22
PABPN1-206ENST00000556809 RBM22Q9NW64 420 aaKnown RBP eCLIP22.7■■□□□ 1.221e-14■■□□□ 11.9
PABPN1-206ENST00000556809 AMACRQ9UHK6 382 aa22.7■■□□□ 1.22
PABPN1-206ENST00000556809 GGT7Q9UJ14 662 aa22.7■■□□□ 1.22
PABPN1-206ENST00000556809 JRKLQ9Y4A0 524 aa22.7■■□□□ 1.22
PABPN1-206ENST00000556809 PCDHGB2Q9Y5G2 931 aa22.7■■□□□ 1.22
PABPN1-206ENST00000556809 CABIN1Q9Y6J0 2220 aa22.7■■□□□ 1.22
PABPN1-206ENST00000556809 TSPAN11A1L157 253 aa22.69■■□□□ 1.22
PABPN1-206ENST00000556809 H0Y8X5 98 aa22.69■■□□□ 1.22
PABPN1-206ENST00000556809 TLR4O00206 839 aa22.69■■□□□ 1.22
PABPN1-206ENST00000556809 TSPAN6O43657 245 aa22.69■■□□□ 1.22
PABPN1-206ENST00000556809 NEBLO76041 1014 aa22.69■■□□□ 1.22
PABPN1-206ENST00000556809 TIMP2P16035 220 aa22.69■■□□□ 1.22
PABPN1-206ENST00000556809 CR2P20023 1033 aa22.69■■□□□ 1.22
PABPN1-206ENST00000556809 MSNP26038 577 aaKnown RBP22.69■■□□□ 1.22
PABPN1-206ENST00000556809 MAXP61244 160 aa22.69■■□□□ 1.22
PABPN1-206ENST00000556809 OTUD4Q01804 1114 aaKnown RBP22.69■■□□□ 1.22
PABPN1-206ENST00000556809 XRCC4Q13426 336 aa22.69■■□□□ 1.22
PABPN1-206ENST00000556809 FGL2Q14314 439 aa22.69■■□□□ 1.22
PABPN1-206ENST00000556809 SKA1Q96BD8 255 aa22.69■■□□□ 1.22
PABPN1-206ENST00000556809 FEM1CQ96JP0 617 aa22.69■■□□□ 1.22
PABPN1-206ENST00000556809 NUDCD1Q96RS6 583 aa22.69■■□□□ 1.22
PABPN1-206ENST00000556809 IL12RB2Q99665 862 aa22.69■■□□□ 1.22
PABPN1-206ENST00000556809 SLC32A1Q9H598 525 aa22.69■■□□□ 1.22
PABPN1-206ENST00000556809 CA5BQ9Y2D0 317 aa22.69■■□□□ 1.22
PABPN1-206ENST00000556809 NCOR2Q9Y618 2525 aa22.69■■□□□ 1.22
PABPN1-206ENST00000556809 HACD1B0YJ81 288 aa22.68■■□□□ 1.22
PABPN1-206ENST00000556809 SLC31A1O15431 190 aa22.68■■□□□ 1.22
PABPN1-206ENST00000556809 SH3BP5O60239 455 aa22.68■■□□□ 1.22
PABPN1-206ENST00000556809 PIGNO95427 931 aa22.68■■□□□ 1.22
PABPN1-206ENST00000556809 JCHAINP01591 159 aa22.68■■□□□ 1.22
PABPN1-206ENST00000556809 PRLRP16471 622 aa22.68■■□□□ 1.22
PABPN1-206ENST00000556809 NXPH1P58417 271 aa22.68■■□□□ 1.22
PABPN1-206ENST00000556809 RPS21P63220 83 aaKnown RBP22.68■■□□□ 1.22
PABPN1-206ENST00000556809 ZBTB17Q13105 803 aa22.68■■□□□ 1.22
PABPN1-206ENST00000556809 KLF1Q13351 362 aaPredicted RBP22.68■■□□□ 1.22
PABPN1-206ENST00000556809 STAT4Q14765 748 aa22.68■■□□□ 1.22
PABPN1-206ENST00000556809 SLC45A4Q5BKX6 768 aa22.68■■□□□ 1.22
PABPN1-206ENST00000556809 ZSCAN30Q86W11 494 aa22.68■■□□□ 1.22
PABPN1-206ENST00000556809 SPATS2Q86XZ4 545 aaKnown RBP22.68■■□□□ 1.22
PABPN1-206ENST00000556809 SLC35F6Q8N357 371 aa22.68■■□□□ 1.22
PABPN1-206ENST00000556809 NSMCE3Q96MG7 304 aa22.68■■□□□ 1.22
PABPN1-206ENST00000556809 ZNF641Q96N77 438 aaPredicted RBP22.68■■□□□ 1.22
PABPN1-206ENST00000556809 QKIQ96PU8 341 aaKnown RBP eCLIP22.68■■□□□ 1.22
PABPN1-206ENST00000556809 C1QTNF2Q9BXJ5 285 aa22.68■■□□□ 1.22
PABPN1-206ENST00000556809 SLC17A9Q9BYT1 436 aa22.68■■□□□ 1.22
PABPN1-206ENST00000556809 POLR1EQ9GZS1 481 aaKnown RBP22.68■■□□□ 1.22
PABPN1-206ENST00000556809 SUV39H2Q9H5I1 410 aa22.68■■□□□ 1.22
PABPN1-206ENST00000556809 ATP13A3Q9H7F0 1226 aa22.68■■□□□ 1.22
PABPN1-206ENST00000556809 SCUBE2Q9NQ36 999 aa22.68■■□□□ 1.22
PABPN1-206ENST00000556809 SEPT10Q9P0V9 454 aa22.68■■□□□ 1.22
PABPN1-206ENST00000556809 ITM2BQ9Y287 266 aa22.68■■□□□ 1.22
PABPN1-206ENST00000556809 A0A1B0GTQ1 180 aa22.67■■□□□ 1.22
PABPN1-206ENST00000556809 TTC24A2A3L6 582 aaPredicted RBP22.67■■□□□ 1.22
PABPN1-206ENST00000556809 ENC1O14682 589 aa22.67■■□□□ 1.22
PABPN1-206ENST00000556809 DFNA5O60443 496 aa22.67■■□□□ 1.22
PABPN1-206ENST00000556809 CBFA2T3O75081 653 aa22.67■■□□□ 1.22
PABPN1-206ENST00000556809 HLA-DQB2P05538 268 aa22.67■■□□□ 1.22
PABPN1-206ENST00000556809 KCNA4P22459 653 aa22.67■■□□□ 1.22
PABPN1-206ENST00000556809 HNRNPA2B1P22626 353 aaKnown RBP22.67■■□□□ 1.22
PABPN1-206ENST00000556809 SERPINA4P29622 427 aa22.67■■□□□ 1.22
PABPN1-206ENST00000556809 ITKQ08881 620 aa22.67■■□□□ 1.22
PABPN1-206ENST00000556809 OVGP1Q12889 678 aa22.67■■□□□ 1.22
PABPN1-206ENST00000556809 SHBQ15464 509 aa22.67■■□□□ 1.22
PABPN1-206ENST00000556809 RALGPS1Q5JS13 557 aa22.67■■□□□ 1.22
PABPN1-206ENST00000556809 TTC7BQ86TV6 843 aa22.67■■□□□ 1.22
PABPN1-206ENST00000556809 CAMK1DQ8IU85 385 aa22.67■■□□□ 1.22
PABPN1-206ENST00000556809 NAXDQ8IW45 347 aa22.67■■□□□ 1.22
PABPN1-206ENST00000556809 TTC13Q8NBP0 860 aa22.67■■□□□ 1.22
PABPN1-206ENST00000556809 CAMK1GQ96NX5 476 aa22.67■■□□□ 1.22
PABPN1-206ENST00000556809 NOD2Q9HC29 1040 aa22.67■■□□□ 1.22
PABPN1-206ENST00000556809 FZD3Q9NPG1 666 aa22.67■■□□□ 1.22
PABPN1-206ENST00000556809 TTLL3Q9Y4R7 772 aa22.67■■□□□ 1.22
PABPN1-206ENST00000556809 LRRK1Q38SD2 2015 aa22.67■■□□□ 1.22
PABPN1-206ENST00000556809 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.66■■□□□ 1.22
PABPN1-206ENST00000556809 TCRBV7S2A1N4TA0A589 114 aa22.66■■□□□ 1.22
PABPN1-206ENST00000556809 H7C0C1 242 aa22.66■■□□□ 1.22
PABPN1-206ENST00000556809 MTSS1O43312 755 aa22.66■■□□□ 1.22
PABPN1-206ENST00000556809 PCDHGA12O60330 932 aa22.66■■□□□ 1.22
PABPN1-206ENST00000556809 ITIH2P19823 946 aa22.66■■□□□ 1.22
PABPN1-206ENST00000556809 ATP5OP48047 213 aa22.66■■□□□ 1.22
PABPN1-206ENST00000556809 EIF3EP60228 445 aaKnown RBP22.66■■□□□ 1.22
PABPN1-206ENST00000556809 FAM193AP78312 1265 aa22.66■■□□□ 1.22
PABPN1-206ENST00000556809 BCL2L1Q07817 233 aa22.66■■□□□ 1.22
PABPN1-206ENST00000556809 LRRC73Q5JTD7 316 aa22.66■■□□□ 1.22
PABPN1-206ENST00000556809 PRAMEF14Q5SWL7 426 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms