RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 RYBPQ8N488 228 aaPredicted RBP11.34□□□□□ -0.59
FOXN3-212ENST00000556541 ZNF366Q8N895 744 aa11.34□□□□□ -0.59
FOXN3-212ENST00000556541 FLCNQ8NFG4 579 aa11.34□□□□□ -0.59
FOXN3-212ENST00000556541 TSTD1Q8NFU3 115 aa11.34□□□□□ -0.59
FOXN3-212ENST00000556541 PTCD2Q8WV60 388 aaKnown RBP11.34□□□□□ -0.59
FOXN3-212ENST00000556541 LRRC39Q96DD0 335 aa11.34□□□□□ -0.59
FOXN3-212ENST00000556541 SIPA1Q96FS4 1042 aa11.34□□□□□ -0.59
FOXN3-212ENST00000556541 IFT43Q96FT9 208 aa11.34□□□□□ -0.59
FOXN3-212ENST00000556541 SCRN2Q96FV2 425 aa11.34□□□□□ -0.59
FOXN3-212ENST00000556541 KLHL32Q96NJ5 620 aa11.34□□□□□ -0.59
FOXN3-212ENST00000556541 RANBP9Q96S59 729 aa11.34□□□□□ -0.59
FOXN3-212ENST00000556541 FAM126AQ9BYI3 521 aaPredicted RBP11.34□□□□□ -0.59
FOXN3-212ENST00000556541 PCED1AQ9H1Q7 454 aa11.34□□□□□ -0.59
FOXN3-212ENST00000556541 MTG2Q9H4K7 406 aa11.34□□□□□ -0.59
FOXN3-212ENST00000556541 MAGEE1Q9HCI5 957 aa11.34□□□□□ -0.59
FOXN3-212ENST00000556541 ITM2CQ9NQX7 267 aa11.34□□□□□ -0.59
FOXN3-212ENST00000556541 DYRK4Q9NR20 520 aa11.34□□□□□ -0.59
FOXN3-212ENST00000556541 KCTD5Q9NXV2 234 aa11.34□□□□□ -0.59
FOXN3-212ENST00000556541 DMGDHQ9UI17 866 aaKnown RBP11.34□□□□□ -0.59
FOXN3-212ENST00000556541 FBXO4Q9UKT5 387 aa11.34□□□□□ -0.59
FOXN3-212ENST00000556541 SARDHQ9UL12 918 aa11.34□□□□□ -0.59
FOXN3-212ENST00000556541 PCDHGC4Q9Y5F7 938 aa11.34□□□□□ -0.59
FOXN3-212ENST00000556541 EML5Q05BV3 1969 aa11.34□□□□□ -0.59
FOXN3-212ENST00000556541 MYLKQ15746 1914 aa11.33□□□□□ -0.6
FOXN3-212ENST00000556541 TCRBV21S2A2A0A5A6 115 aa11.33□□□□□ -0.6
FOXN3-212ENST00000556541 CAPN8A6NHC0 703 aa11.33□□□□□ -0.6
FOXN3-212ENST00000556541 E7ESA3 106 aa11.33□□□□□ -0.6
FOXN3-212ENST00000556541 K7ESF4 209 aa11.33□□□□□ -0.6
FOXN3-212ENST00000556541 PSMD11O00231 422 aa11.33□□□□□ -0.6
FOXN3-212ENST00000556541 STK25O00506 426 aa11.33□□□□□ -0.6
FOXN3-212ENST00000556541 GPR37L1O60883 481 aa11.33□□□□□ -0.6
FOXN3-212ENST00000556541 GJB3O75712 270 aa11.33□□□□□ -0.6
FOXN3-212ENST00000556541 TMEM63AO94886 807 aa11.33□□□□□ -0.6
FOXN3-212ENST00000556541 IL1BP01584 269 aa11.33□□□□□ -0.6
FOXN3-212ENST00000556541 DNTTP04053 509 aa11.33□□□□□ -0.6
FOXN3-212ENST00000556541 CYP2A6P11509 494 aaPredicted RBP11.33□□□□□ -0.6
FOXN3-212ENST00000556541 ADRB3P13945 408 aa11.33□□□□□ -0.6
FOXN3-212ENST00000556541 ZNF30P17039 623 aa11.33□□□□□ -0.6
FOXN3-212ENST00000556541 NDUFV2P19404 249 aa11.33□□□□□ -0.6
FOXN3-212ENST00000556541 OXTRP30559 389 aa11.33□□□□□ -0.6
FOXN3-212ENST00000556541 WASP42768 502 aa11.33□□□□□ -0.6
FOXN3-212ENST00000556541 LMAN1P49257 510 aa11.33□□□□□ -0.6
FOXN3-212ENST00000556541 ITGA8P53708 1063 aa11.33□□□□□ -0.6
FOXN3-212ENST00000556541 PDE1BQ01064 536 aa11.33□□□□□ -0.6
FOXN3-212ENST00000556541 CREB5Q02930 508 aa11.33□□□□□ -0.6
FOXN3-212ENST00000556541 TRIP13Q15645 432 aaPredicted RBP11.33□□□□□ -0.6
FOXN3-212ENST00000556541 QPCTQ16769 361 aa11.33□□□□□ -0.6
FOXN3-212ENST00000556541 UGP2Q16851 508 aa11.33□□□□□ -0.6
FOXN3-212ENST00000556541 CFAP58Q5T655 872 aa11.33□□□□□ -0.6
FOXN3-212ENST00000556541 PIP5KL1Q5T9C9 394 aa11.33□□□□□ -0.6
FOXN3-212ENST00000556541 WDR93Q6P2C0 686 aa11.33□□□□□ -0.6
FOXN3-212ENST00000556541 USP45Q70EL2 814 aa11.33□□□□□ -0.6
FOXN3-212ENST00000556541 ZNF534Q76KX8 674 aa11.33□□□□□ -0.6
FOXN3-212ENST00000556541 PARS2Q7L3T8 475 aaKnown RBP11.33□□□□□ -0.6
FOXN3-212ENST00000556541 RELL1Q8IUW5 271 aa11.33□□□□□ -0.6
FOXN3-212ENST00000556541 ZCCHC9Q8N567 271 aaKnown RBP11.33□□□□□ -0.6
FOXN3-212ENST00000556541 GPR161Q8N6U8 529 aaKnown RBP11.33□□□□□ -0.6
FOXN3-212ENST00000556541 LRRN4CLQ8ND94 238 aa11.33□□□□□ -0.6
FOXN3-212ENST00000556541 IPMKQ8NFU5 416 aa11.33□□□□□ -0.6
FOXN3-212ENST00000556541 OR6K2Q8NGY2 324 aa11.33□□□□□ -0.6
FOXN3-212ENST00000556541 GRIN3AQ8TCU5 1115 aa11.33□□□□□ -0.6
FOXN3-212ENST00000556541 DTX3LQ8TDB6 740 aa11.33□□□□□ -0.6
FOXN3-212ENST00000556541 UBXN4Q92575 508 aa11.33□□□□□ -0.6
FOXN3-212ENST00000556541 ARRDC3Q96B67 414 aa11.33□□□□□ -0.6
FOXN3-212ENST00000556541 NAT9Q9BTE0 207 aa11.33□□□□□ -0.6
FOXN3-212ENST00000556541 FICDQ9BVA6 458 aa11.33□□□□□ -0.6
FOXN3-212ENST00000556541 IL22Q9GZX6 179 aa11.33□□□□□ -0.6
FOXN3-212ENST00000556541 MRM3Q9HC36 420 aaKnown RBP11.33□□□□□ -0.6
FOXN3-212ENST00000556541 ZDHHC4Q9NPG8 344 aa11.33□□□□□ -0.6
FOXN3-212ENST00000556541 ZDHHC18Q9NUE0 388 aa11.33□□□□□ -0.6
FOXN3-212ENST00000556541 NFKBIL1Q9UBC1 381 aaPredicted RBP11.33□□□□□ -0.6
FOXN3-212ENST00000556541 ANAPC5Q9UJX4 755 aa11.33□□□□□ -0.6
FOXN3-212ENST00000556541 CHKBQ9Y259 395 aa11.33□□□□□ -0.6
FOXN3-212ENST00000556541 PCDHB9Q9Y5E1 797 aa11.33□□□□□ -0.6
FOXN3-212ENST00000556541 LRRK1Q38SD2 2015 aa11.33□□□□□ -0.6
FOXN3-212ENST00000556541 CACNA1IQ9P0X4 2223 aa11.32□□□□□ -0.6
FOXN3-212ENST00000556541 PLXNA2O75051 1894 aa11.32□□□□□ -0.6
FOXN3-212ENST00000556541 MAGEB16A2A368 324 aa11.32□□□□□ -0.6
FOXN3-212ENST00000556541 RGSL1A5PLK6 1076 aa11.32□□□□□ -0.6
FOXN3-212ENST00000556541 KPNA3O00505 521 aaPredicted RBP11.32□□□□□ -0.6
FOXN3-212ENST00000556541 MID1O15344 667 aa11.32□□□□□ -0.6
FOXN3-212ENST00000556541 TSPAN6O43657 245 aa11.32□□□□□ -0.6
FOXN3-212ENST00000556541 PLRG1O43660 514 aaKnown RBP11.32□□□□□ -0.6
FOXN3-212ENST00000556541 BNIP3LO60238 219 aa11.32□□□□□ -0.6
FOXN3-212ENST00000556541 PDGFBP01127 241 aaPredicted RBP11.32□□□□□ -0.6
FOXN3-212ENST00000556541 DCNP07585 359 aaKnown RBP11.32□□□□□ -0.6
FOXN3-212ENST00000556541 PDHA1P08559 390 aa11.32□□□□□ -0.6
FOXN3-212ENST00000556541 TDGF1P13385 188 aa11.32□□□□□ -0.6
FOXN3-212ENST00000556541 TIMP2P16035 220 aa11.32□□□□□ -0.6
FOXN3-212ENST00000556541 GKP32189 559 aa11.32□□□□□ -0.6
FOXN3-212ENST00000556541 MMP12P39900 470 aa11.32□□□□□ -0.6
FOXN3-212ENST00000556541 P2RY2P41231 377 aa11.32□□□□□ -0.6
FOXN3-212ENST00000556541 PSMD8P48556 350 aa11.32□□□□□ -0.6
FOXN3-212ENST00000556541 VPS41P49754 854 aa11.32□□□□□ -0.6
FOXN3-212ENST00000556541 GUCY2DQ02846 1103 aa11.32□□□□□ -0.6
FOXN3-212ENST00000556541 AGERQ15109 404 aa11.32□□□□□ -0.6
FOXN3-212ENST00000556541 ZNF528Q3MIS6 628 aa11.32□□□□□ -0.6
FOXN3-212ENST00000556541 TMEM52BQ4KMG9 183 aa11.32□□□□□ -0.6
FOXN3-212ENST00000556541 SIRPB2Q5JXA9 342 aa11.32□□□□□ -0.6
FOXN3-212ENST00000556541 TEX35Q5T0J7 233 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms