RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 PHTF2Q8N3S3 785 aa10.9□□□□□ -0.66
LINC01550-206ENST00000556462 PCDH20Q8N6Y1 951 aaKnown RBP10.9□□□□□ -0.66
LINC01550-206ENST00000556462 MDGA1Q8NFP4 955 aa10.9□□□□□ -0.66
LINC01550-206ENST00000556462 BLOC1S5Q8TDH9 187 aa10.9□□□□□ -0.66
LINC01550-206ENST00000556462 WFIKKN2Q8TEU8 576 aa10.9□□□□□ -0.66
LINC01550-206ENST00000556462 PDCD6IPQ8WUM4 868 aaKnown RBP10.9□□□□□ -0.66
LINC01550-206ENST00000556462 PIH1D2Q8WWB5 315 aa10.9□□□□□ -0.66
LINC01550-206ENST00000556462 ADGRE3Q9BY15 652 aa10.9□□□□□ -0.66
LINC01550-206ENST00000556462 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.9□□□□□ -0.66
LINC01550-206ENST00000556462 DEC1Q9P2X7 70 aa10.9□□□□□ -0.66
LINC01550-206ENST00000556462 USP15Q9Y4E8 981 aaPredicted RBP10.9□□□□□ -0.66
LINC01550-206ENST00000556462 PCDHB9Q9Y5E1 797 aa10.9□□□□□ -0.66
LINC01550-206ENST00000556462 ARL5AQ9Y689 179 aa10.9□□□□□ -0.66
LINC01550-206ENST00000556462 KIF26AQ9ULI4 1882 aaPredicted RBP10.9□□□□□ -0.67
LINC01550-206ENST00000556462 IQANK1A0A1B0GTG1 560 aa10.89□□□□□ -0.67
LINC01550-206ENST00000556462 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.89□□□□□ -0.67
LINC01550-206ENST00000556462 ARNTLO00327 626 aa10.89□□□□□ -0.67
LINC01550-206ENST00000556462 PGLSO95336 258 aa10.89□□□□□ -0.67
LINC01550-206ENST00000556462 GSRP00390 522 aa10.89□□□□□ -0.67
LINC01550-206ENST00000556462 DLDP09622 509 aaKnown RBP10.89□□□□□ -0.67
LINC01550-206ENST00000556462 GJA4P35212 333 aa10.89□□□□□ -0.67
LINC01550-206ENST00000556462 OPRD1P41143 372 aa10.89□□□□□ -0.67
LINC01550-206ENST00000556462 ACVR1Q04771 509 aa10.89□□□□□ -0.67
LINC01550-206ENST00000556462 BCL2L1Q07817 233 aa10.89□□□□□ -0.67
LINC01550-206ENST00000556462 NAB1Q13506 487 aa10.89□□□□□ -0.67
LINC01550-206ENST00000556462 CARD16Q5EG05 197 aa10.89□□□□□ -0.67
LINC01550-206ENST00000556462 PDPK2PQ6A1A2 396 aa10.89□□□□□ -0.67
LINC01550-206ENST00000556462 KIAA0930Q6ICG6 404 aaPredicted RBP10.89□□□□□ -0.67
LINC01550-206ENST00000556462 PACS1Q6VY07 963 aa10.89□□□□□ -0.67
LINC01550-206ENST00000556462 DPY19L3Q6ZPD9 716 aa10.89□□□□□ -0.67
LINC01550-206ENST00000556462 SH2D5Q6ZV89 423 aa10.89□□□□□ -0.67
LINC01550-206ENST00000556462 Q6ZVU0 165 aa10.89□□□□□ -0.67
LINC01550-206ENST00000556462 MICALCLQ6ZW33 695 aa10.89□□□□□ -0.67
LINC01550-206ENST00000556462 YAF2Q8IY57 180 aa10.89□□□□□ -0.67
LINC01550-206ENST00000556462 LPCAT1Q8NF37 534 aa10.89□□□□□ -0.67
LINC01550-206ENST00000556462 OR2A12Q8NGT7 310 aa10.89□□□□□ -0.67
LINC01550-206ENST00000556462 TTC8Q8TAM2 541 aa10.89□□□□□ -0.67
LINC01550-206ENST00000556462 NXPE3Q969Y0 559 aa10.89□□□□□ -0.67
LINC01550-206ENST00000556462 LRCH3Q96II8 777 aa10.89□□□□□ -0.67
LINC01550-206ENST00000556462 NECTIN4Q96NY8 510 aa10.89□□□□□ -0.67
LINC01550-206ENST00000556462 CPEB1Q9BZB8 566 aaKnown RBP10.89□□□□□ -0.67
LINC01550-206ENST00000556462 CIPCQ9C0C6 399 aa10.89□□□□□ -0.67
LINC01550-206ENST00000556462 ELOVL2Q9NXB9 296 aa10.89□□□□□ -0.67
LINC01550-206ENST00000556462 EPS15L1Q9UBC2 864 aa10.89□□□□□ -0.67
LINC01550-206ENST00000556462 MYLKQ15746 1914 aa10.89□□□□□ -0.67
LINC01550-206ENST00000556462 TTC34A8MYJ7 566 aa10.89□□□□□ -0.67
LINC01550-206ENST00000556462 H3BQ06 376 aaPredicted RBP10.89□□□□□ -0.67
LINC01550-206ENST00000556462 SOCS5O75159 536 aa10.89□□□□□ -0.67
LINC01550-206ENST00000556462 ATP5BP06576 529 aaKnown RBP10.89□□□□□ -0.67
LINC01550-206ENST00000556462 SRPRAP08240 638 aaKnown RBP10.89□□□□□ -0.67
LINC01550-206ENST00000556462 SNRPAP09012 282 aaKnown RBP10.89□□□□□ -0.67
LINC01550-206ENST00000556462 CA4P22748 312 aa10.89□□□□□ -0.67
LINC01550-206ENST00000556462 GDI1P31150 447 aa10.89□□□□□ -0.67
LINC01550-206ENST00000556462 ARSDP51689 593 aa10.89□□□□□ -0.67
LINC01550-206ENST00000556462 CCNHP51946 323 aaPredicted RBP10.89□□□□□ -0.67
LINC01550-206ENST00000556462 MLLT1Q03111 559 aaPredicted RBP10.89□□□□□ -0.67
LINC01550-206ENST00000556462 PPARDQ03181 441 aa10.89□□□□□ -0.67
LINC01550-206ENST00000556462 MPP2Q14168 576 aa10.89□□□□□ -0.67
LINC01550-206ENST00000556462 PTPRCAPQ14761 206 aa10.89□□□□□ -0.67
LINC01550-206ENST00000556462 ARMC12Q5T9G4 340 aa10.89□□□□□ -0.67
LINC01550-206ENST00000556462 NLRP9Q7RTR0 991 aa10.89□□□□□ -0.67
LINC01550-206ENST00000556462 RASSF3Q86WH2 238 aa10.89□□□□□ -0.67
LINC01550-206ENST00000556462 SFTPA1Q8IWL2 248 aa10.89□□□□□ -0.67
LINC01550-206ENST00000556462 CNTN4Q8IWV2 1026 aa10.89□□□□□ -0.67
LINC01550-206ENST00000556462 CPA6Q8N4T0 437 aa10.89□□□□□ -0.67
LINC01550-206ENST00000556462 MDM1Q8TC05 714 aa10.89□□□□□ -0.67
LINC01550-206ENST00000556462 PEX13Q92968 403 aa10.89□□□□□ -0.67
LINC01550-206ENST00000556462 CPNE1Q99829 537 aa10.89□□□□□ -0.67
LINC01550-206ENST00000556462 MCMBPQ9BTE3 642 aa10.89□□□□□ -0.67
LINC01550-206ENST00000556462 TRMT61BQ9BVS5 477 aaKnown RBP10.89□□□□□ -0.67
LINC01550-206ENST00000556462 ATP13A3Q9H7F0 1226 aa10.89□□□□□ -0.67
LINC01550-206ENST00000556462 IARS2Q9NSE4 1012 aaKnown RBP10.89□□□□□ -0.67
LINC01550-206ENST00000556462 CD207Q9UJ71 328 aa10.89□□□□□ -0.67
LINC01550-206ENST00000556462 NUMBLQ9Y6R0 609 aa10.89□□□□□ -0.67
LINC01550-206ENST00000556462 ANKRD36A6QL64 1941 aa10.88□□□□□ -0.67
LINC01550-206ENST00000556462 WASH3PC4AMC7 463 aa10.88□□□□□ -0.67
LINC01550-206ENST00000556462 ANHXE9PGG2 379 aa10.88□□□□□ -0.67
LINC01550-206ENST00000556462 BUD23O43709 281 aaKnown RBP10.88□□□□□ -0.67
LINC01550-206ENST00000556462 BNIP3LO60238 219 aa10.88□□□□□ -0.67
LINC01550-206ENST00000556462 SIN3BO75182 1162 aa10.88□□□□□ -0.67
LINC01550-206ENST00000556462 KRT37O76014 449 aa10.88□□□□□ -0.67
LINC01550-206ENST00000556462 POP4O95707 220 aaKnown RBP10.88□□□□□ -0.67
LINC01550-206ENST00000556462 ASLP04424 464 aa10.88□□□□□ -0.67
LINC01550-206ENST00000556462 F7P08709 466 aaPredicted RBP10.88□□□□□ -0.67
LINC01550-206ENST00000556462 BRAFP15056 766 aa10.88□□□□□ -0.67
LINC01550-206ENST00000556462 PAMP19021 973 aa10.88□□□□□ -0.67
LINC01550-206ENST00000556462 PSMA3P25788 255 aa10.88□□□□□ -0.67
LINC01550-206ENST00000556462 GP5P40197 560 aa10.88□□□□□ -0.67
LINC01550-206ENST00000556462 SERPINB9P50453 376 aa10.88□□□□□ -0.67
LINC01550-206ENST00000556462 GRAMD4Q6IC98 578 aa10.88□□□□□ -0.67
LINC01550-206ENST00000556462 ZSWIM9Q86XI8 627 aa10.88□□□□□ -0.67
LINC01550-206ENST00000556462 RYBPQ8N488 228 aaPredicted RBP10.88□□□□□ -0.67
LINC01550-206ENST00000556462 ARFGAP2Q8N6H7 521 aa10.88□□□□□ -0.67
LINC01550-206ENST00000556462 CHST14Q8NCH0 376 aa10.88□□□□□ -0.67
LINC01550-206ENST00000556462 OR13C4Q8NGS5 318 aa10.88□□□□□ -0.67
LINC01550-206ENST00000556462 STYXQ8WUJ0 223 aa10.88□□□□□ -0.67
LINC01550-206ENST00000556462 PTPRN2Q92932 1015 aa10.88□□□□□ -0.67
LINC01550-206ENST00000556462 HDAC10Q969S8 669 aa10.88□□□□□ -0.67
LINC01550-206ENST00000556462 ECHDC3Q96DC8 303 aa10.88□□□□□ -0.67
LINC01550-206ENST00000556462 SERAC1Q96JX3 654 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms