RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 PIK3C2AO00443 1686 aa3.57□□□□□ -1.84
SRP54-209ENST00000555746 RGPD8O14715 1765 aaPredicted RBP3.57□□□□□ -1.84
SRP54-209ENST00000555746 BTAF1O14981 1849 aa3.57□□□□□ -1.84
SRP54-209ENST00000555746 CEP104O60308 925 aa3.57□□□□□ -1.84
SRP54-209ENST00000555746 CBX6O95503 412 aa3.57□□□□□ -1.84
SRP54-209ENST00000555746 TOP3BO95985 862 aaKnown RBP3.57□□□□□ -1.84
SRP54-209ENST00000555746 TNFAIP3P21580 790 aa3.57□□□□□ -1.84
SRP54-209ENST00000555746 CD72P21854 359 aa3.57□□□□□ -1.84
SRP54-209ENST00000555746 YWHAQP27348 245 aa3.57□□□□□ -1.84
SRP54-209ENST00000555746 GGT5P36269 586 aa3.57□□□□□ -1.84
SRP54-209ENST00000555746 RXRGP48443 463 aa3.57□□□□□ -1.84
SRP54-209ENST00000555746 CENPAP49450 140 aa3.57□□□□□ -1.84
SRP54-209ENST00000555746 EFNB1P98172 346 aa3.57□□□□□ -1.84
SRP54-209ENST00000555746 TDGQ13569 410 aa3.57□□□□□ -1.84
SRP54-209ENST00000555746 MAPRE1Q15691 268 aaKnown RBP3.57□□□□□ -1.84
SRP54-209ENST00000555746 PKN2Q16513 984 aaKnown RBP3.57□□□□□ -1.84
SRP54-209ENST00000555746 CCDC142Q17RM4 750 aa3.57□□□□□ -1.84
SRP54-209ENST00000555746 ZNF318Q5VUA4 2279 aa3.57□□□□□ -1.84
SRP54-209ENST00000555746 SLC22A25Q6T423 547 aa3.57□□□□□ -1.84
SRP54-209ENST00000555746 DSTYKQ6XUX3 929 aa3.57□□□□□ -1.84
SRP54-209ENST00000555746 CCDC141Q6ZP82 1450 aa3.57□□□□□ -1.84
SRP54-209ENST00000555746 ZNF575Q86XF7 245 aa3.57□□□□□ -1.84
SRP54-209ENST00000555746 TMC8Q8IU68 726 aa3.57□□□□□ -1.84
SRP54-209ENST00000555746 NME8Q8N427 588 aa3.57□□□□□ -1.84
SRP54-209ENST00000555746 DPP10Q8N608 796 aa3.57□□□□□ -1.84
SRP54-209ENST00000555746 PLD5Q8N7P1 536 aa3.57□□□□□ -1.84
SRP54-209ENST00000555746 C11orf65Q8NCR3 313 aa3.57□□□□□ -1.84
SRP54-209ENST00000555746 BICD2Q8TD16 824 aa3.57□□□□□ -1.84
SRP54-209ENST00000555746 CENPIQ92674 756 aaPredicted RBP3.57□□□□□ -1.84
SRP54-209ENST00000555746 SKA1Q96BD8 255 aa3.57□□□□□ -1.84
SRP54-209ENST00000555746 CAPNS2Q96L46 248 aa3.57□□□□□ -1.84
SRP54-209ENST00000555746 C7orf26Q96N11 449 aa3.57□□□□□ -1.84
SRP54-209ENST00000555746 NR1H4Q96RI1 486 aaPredicted RBP3.57□□□□□ -1.84
SRP54-209ENST00000555746 TTYH1Q9H313 450 aaPredicted RBP3.57□□□□□ -1.84
SRP54-209ENST00000555746 KCND2Q9NZV8 630 aa3.57□□□□□ -1.84
SRP54-209ENST00000555746 MPP6Q9NZW5 540 aa3.57□□□□□ -1.84
SRP54-209ENST00000555746 HEY2Q9UBP5 337 aa3.57□□□□□ -1.84
SRP54-209ENST00000555746 KDM3AQ9Y4C1 1321 aa3.57□□□□□ -1.84
SRP54-209ENST00000555746 CRYBG1Q9Y4K1 1723 aa3.57□□□□□ -1.84
SRP54-209ENST00000555746 AKAP11Q9UKA4 1901 aa3.56□□□□□ -1.84
SRP54-209ENST00000555746 NHSQ6T4R5 1651 aa3.56□□□□□ -1.84
SRP54-209ENST00000555746 QRICH2Q9H0J4 1663 aa3.56□□□□□ -1.84
SRP54-209ENST00000555746 TRPM1Q7Z4N2 1603 aa3.56□□□□□ -1.84
SRP54-209ENST00000555746 USP6P35125 1406 aa3.56□□□□□ -1.84
SRP54-209ENST00000555746 ITIH6Q6UXX5 1313 aa3.56□□□□□ -1.84
SRP54-209ENST00000555746 ADGRF5Q8IZF2 1346 aa3.56□□□□□ -1.84
SRP54-209ENST00000555746 ARHGAP10A1A4S6 786 aa3.56□□□□□ -1.84
SRP54-209ENST00000555746 PABPN1LA6NDY0 278 aaKnown RBP3.56□□□□□ -1.84
SRP54-209ENST00000555746 CBY3A6NI87 242 aa3.56□□□□□ -1.84
SRP54-209ENST00000555746 A6NNC1 897 aa3.56□□□□□ -1.84
SRP54-209ENST00000555746 TAF4O00268 1085 aa3.56□□□□□ -1.84
SRP54-209ENST00000555746 MDM4O15151 490 aa3.56□□□□□ -1.84
SRP54-209ENST00000555746 SPTLC2O15270 562 aa3.56□□□□□ -1.84
SRP54-209ENST00000555746 TNFSF14O43557 240 aa3.56□□□□□ -1.84
SRP54-209ENST00000555746 TBX18O95935 607 aa3.56□□□□□ -1.84
SRP54-209ENST00000555746 IFNA2P01563 188 aa3.56□□□□□ -1.84
SRP54-209ENST00000555746 IL1AP01583 271 aa3.56□□□□□ -1.84
SRP54-209ENST00000555746 FGF2P09038 288 aa3.56□□□□□ -1.84
SRP54-209ENST00000555746 MYZAPP0CAP1 466 aa3.56□□□□□ -1.84
SRP54-209ENST00000555746 TSPY4P0CV99 314 aa3.56□□□□□ -1.84
SRP54-209ENST00000555746 TSPY10P0CW01 314 aa3.56□□□□□ -1.84
SRP54-209ENST00000555746 COX7A2P14406 83 aa3.56□□□□□ -1.84
SRP54-209ENST00000555746 CALRP27797 417 aaKnown RBP3.56□□□□□ -1.84
SRP54-209ENST00000555746 EPHA8P29322 1005 aaPredicted RBP3.56□□□□□ -1.84
SRP54-209ENST00000555746 DPP6P42658 865 aa3.56□□□□□ -1.84
SRP54-209ENST00000555746 PAFAH1B1P43034 410 aa3.56□□□□□ -1.84
SRP54-209ENST00000555746 MMP13P45452 471 aa3.56□□□□□ -1.84
SRP54-209ENST00000555746 ARSFP54793 590 aa3.56□□□□□ -1.84
SRP54-209ENST00000555746 UFM1P61960 85 aa3.56□□□□□ -1.84
SRP54-209ENST00000555746 CYP4A11Q02928 519 aa3.56□□□□□ -1.84
SRP54-209ENST00000555746 SIM2Q14190 667 aaPredicted RBP3.56□□□□□ -1.84
SRP54-209ENST00000555746 RBMS2Q15434 407 aaKnown RBP3.56□□□□□ -1.84
SRP54-209ENST00000555746 INPP5JQ15735 1006 aaPredicted RBP3.56□□□□□ -1.84
SRP54-209ENST00000555746 ME3Q16798 604 aa3.56□□□□□ -1.84
SRP54-209ENST00000555746 ZNF667Q5HYK9 610 aa3.56□□□□□ -1.84
SRP54-209ENST00000555746 FAM69AQ5T7M9 428 aa3.56□□□□□ -1.84
SRP54-209ENST00000555746 WDR78Q5VTH9 848 aa3.56□□□□□ -1.84
SRP54-209ENST00000555746 TMEM81Q6P7N7 255 aa3.56□□□□□ -1.84
SRP54-209ENST00000555746 RSRC2Q7L4I2 434 aaKnown RBP3.56□□□□□ -1.84
SRP54-209ENST00000555746 CTU1Q7Z7A3 348 aaKnown RBP3.56□□□□□ -1.84
SRP54-209ENST00000555746 SERPINA11Q86U17 422 aa3.56□□□□□ -1.84
SRP54-209ENST00000555746 ARFGAP1Q8N6T3 406 aa3.56□□□□□ -1.84
SRP54-209ENST00000555746 DNAAF1Q8NEP3 725 aa3.56□□□□□ -1.84
SRP54-209ENST00000555746 CMASQ8NFW8 434 aaPredicted RBP3.56□□□□□ -1.84
SRP54-209ENST00000555746 RPL36ALQ969Q0 106 aaKnown RBP3.56□□□□□ -1.84
SRP54-209ENST00000555746 ZNF419Q96HQ0 510 aaPredicted RBP3.56□□□□□ -1.84
SRP54-209ENST00000555746 ZNF333Q96JL9 665 aa3.56□□□□□ -1.84
SRP54-209ENST00000555746 LBHD1Q9BQE6 289 aaPredicted RBP3.56□□□□□ -1.84
SRP54-209ENST00000555746 ZHX3Q9H4I2 956 aa3.56□□□□□ -1.84
SRP54-209ENST00000555746 TASP1Q9H6P5 420 aa3.56□□□□□ -1.84
SRP54-209ENST00000555746 AAMDCQ9H7C9 122 aa3.56□□□□□ -1.84
SRP54-209ENST00000555746 MAP6D1Q9H9H5 199 aa3.56□□□□□ -1.84
SRP54-209ENST00000555746 TRNAU1APQ9NX07 287 aaKnown RBP3.56□□□□□ -1.84
SRP54-209ENST00000555746 TAS2R10Q9NYW0 307 aa3.56□□□□□ -1.84
SRP54-209ENST00000555746 IL1RAPL1Q9NZN1 696 aa3.56□□□□□ -1.84
SRP54-209ENST00000555746 PEMTQ9UBM1 199 aa3.56□□□□□ -1.84
SRP54-209ENST00000555746 SEL1LQ9UBV2 794 aa3.56□□□□□ -1.84
SRP54-209ENST00000555746 SARDHQ9UL12 918 aa3.56□□□□□ -1.84
SRP54-209ENST00000555746 NAALADL1Q9UQQ1 740 aa3.56□□□□□ -1.84
SRP54-209ENST00000555746 TRPM7Q96QT4 1865 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms