RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 SLC16A12Q6ZSM3 486 aa5.62□□□□□ -1.51
CKS1BP1-201ENST00000555221 TRILQ7L0X0 811 aa5.62□□□□□ -1.51
CKS1BP1-201ENST00000555221 PATL1Q86TB9 770 aaKnown RBP5.62□□□□□ -1.51
CKS1BP1-201ENST00000555221 WDTC1Q8N5D0 677 aa5.62□□□□□ -1.51
CKS1BP1-201ENST00000555221 FAM120BQ96EK7 910 aaKnown RBP5.62□□□□□ -1.51
CKS1BP1-201ENST00000555221 CMTM3Q96MX0 182 aa5.62□□□□□ -1.51
CKS1BP1-201ENST00000555221 GFM1Q96RP9 751 aaKnown RBP5.62□□□□□ -1.51
CKS1BP1-201ENST00000555221 FTOQ9C0B1 505 aaKnown RBP eCLIP5.62□□□□□ -1.51
CKS1BP1-201ENST00000555221 SMARCAD1Q9H4L7 1026 aa5.62□□□□□ -1.51
CKS1BP1-201ENST00000555221 POLR1BQ9H9Y6 1135 aa5.62□□□□□ -1.51
CKS1BP1-201ENST00000555221 KIF9Q9HAQ2 790 aa5.62□□□□□ -1.51
CKS1BP1-201ENST00000555221 RRP7BPQ9NSQ0 103 aa5.62□□□□□ -1.51
CKS1BP1-201ENST00000555221 PLK2Q9NYY3 685 aa5.62□□□□□ -1.51
CKS1BP1-201ENST00000555221 ABI3Q9P2A4 366 aa5.62□□□□□ -1.51
CKS1BP1-201ENST00000555221 HEY2Q9UBP5 337 aa5.62□□□□□ -1.51
CKS1BP1-201ENST00000555221 MTMR6Q9Y217 621 aa5.62□□□□□ -1.51
CKS1BP1-201ENST00000555221 BTBD3Q9Y2F9 522 aa5.62□□□□□ -1.51
CKS1BP1-201ENST00000555221 LSM4Q9Y4Z0 139 aaKnown RBP5.62□□□□□ -1.51
CKS1BP1-201ENST00000555221 RSF1Q96T23 1441 aaPredicted RBP5.62□□□□□ -1.51
CKS1BP1-201ENST00000555221 CHL1O00533 1208 aa5.61□□□□□ -1.51
CKS1BP1-201ENST00000555221 CENPBP07199 599 aaPredicted RBP5.61□□□□□ -1.51
CKS1BP1-201ENST00000555221 RARGP13631 454 aa5.61□□□□□ -1.51
CKS1BP1-201ENST00000555221 ETFAP13804 333 aa5.61□□□□□ -1.51
CKS1BP1-201ENST00000555221 ITGAXP20702 1163 aa5.61□□□□□ -1.51
CKS1BP1-201ENST00000555221 CHATP28329 748 aa5.61□□□□□ -1.51
CKS1BP1-201ENST00000555221 HADHAP40939 763 aa5.61□□□□□ -1.51
CKS1BP1-201ENST00000555221 ME1P48163 572 aa5.61□□□□□ -1.51
CKS1BP1-201ENST00000555221 PPP3CCP48454 512 aa5.61□□□□□ -1.51
CKS1BP1-201ENST00000555221 CHAF1BQ13112 559 aa5.61□□□□□ -1.51
CKS1BP1-201ENST00000555221 AIMP2Q13155 320 aaKnown RBP5.61□□□□□ -1.51
CKS1BP1-201ENST00000555221 ACVR2BQ13705 512 aa5.61□□□□□ -1.51
CKS1BP1-201ENST00000555221 DRAP1Q14919 205 aaPredicted RBP5.61□□□□□ -1.51
CKS1BP1-201ENST00000555221 TOMM20Q15388 145 aa5.61□□□□□ -1.51
CKS1BP1-201ENST00000555221 RBMS2Q15434 407 aaKnown RBP5.61□□□□□ -1.51
CKS1BP1-201ENST00000555221 ALG11Q2TAA5 492 aa5.61□□□□□ -1.51
CKS1BP1-201ENST00000555221 DUSP28Q4G0W2 176 aa5.61□□□□□ -1.51
CKS1BP1-201ENST00000555221 MRPL10Q7Z7H8 261 aaKnown RBP5.61□□□□□ -1.51
CKS1BP1-201ENST00000555221 PALB2Q86YC2 1186 aa5.61□□□□□ -1.51
CKS1BP1-201ENST00000555221 TICAM1Q8IUC6 712 aa5.61□□□□□ -1.51
CKS1BP1-201ENST00000555221 SFTPA2Q8IWL1 248 aa5.61□□□□□ -1.51
CKS1BP1-201ENST00000555221 ADGRF2Q8IZF7 708 aa5.61□□□□□ -1.51
CKS1BP1-201ENST00000555221 MMP21Q8N119 569 aa5.61□□□□□ -1.51
CKS1BP1-201ENST00000555221 PARP16Q8N5Y8 322 aa5.61□□□□□ -1.51
CKS1BP1-201ENST00000555221 NANOGP1Q8N7R0 232 aa5.61□□□□□ -1.51
CKS1BP1-201ENST00000555221 GABPB2Q8TAK5 448 aaPredicted RBP5.61□□□□□ -1.51
CKS1BP1-201ENST00000555221 DENND1AQ8TEH3 1009 aa5.61□□□□□ -1.51
CKS1BP1-201ENST00000555221 SNRNP27Q8WVK2 155 aaKnown RBP5.61□□□□□ -1.51
CKS1BP1-201ENST00000555221 SGCDQ92629 289 aa5.61□□□□□ -1.51
CKS1BP1-201ENST00000555221 LPAR1Q92633 364 aa5.61□□□□□ -1.51
CKS1BP1-201ENST00000555221 TMEM68Q96MH6 324 aa5.61□□□□□ -1.51
CKS1BP1-201ENST00000555221 WDFY2Q96P53 400 aa5.61□□□□□ -1.51
CKS1BP1-201ENST00000555221 SLITRK1Q96PX8 696 aa5.61□□□□□ -1.51
CKS1BP1-201ENST00000555221 NPFFR1Q9GZQ6 430 aa5.61□□□□□ -1.51
CKS1BP1-201ENST00000555221 MAGEE1Q9HCI5 957 aa5.61□□□□□ -1.51
CKS1BP1-201ENST00000555221 ADD3Q9UEY8 706 aaKnown RBP5.61□□□□□ -1.51
CKS1BP1-201ENST00000555221 SCAMP1O15126 338 aa5.6□□□□□ -1.51
CKS1BP1-201ENST00000555221 FIBPO43427 364 aa5.6□□□□□ -1.51
CKS1BP1-201ENST00000555221 KLK8O60259 260 aa5.6□□□□□ -1.51
CKS1BP1-201ENST00000555221 EPN2O95208 641 aa5.6□□□□□ -1.51
CKS1BP1-201ENST00000555221 CBSLP0DN79 551 aa5.6□□□□□ -1.51
CKS1BP1-201ENST00000555221 AGAP20933 346 aa5.6□□□□□ -1.51
CKS1BP1-201ENST00000555221 TBXAS1P24557 533 aaPredicted RBP5.6□□□□□ -1.51
CKS1BP1-201ENST00000555221 SHMT1P34896 483 aa5.6□□□□□ -1.51
CKS1BP1-201ENST00000555221 CBSP35520 551 aa5.6□□□□□ -1.51
CKS1BP1-201ENST00000555221 CXCR3P49682 368 aa5.6□□□□□ -1.51
CKS1BP1-201ENST00000555221 NLRP5P59047 1200 aa5.6□□□□□ -1.51
CKS1BP1-201ENST00000555221 CEBPZQ03701 1054 aaKnown RBP5.6□□□□□ -1.51
CKS1BP1-201ENST00000555221 DUSP6Q16828 381 aa5.6□□□□□ -1.51
CKS1BP1-201ENST00000555221 SOWAHAQ2M3V2 549 aa5.6□□□□□ -1.51
CKS1BP1-201ENST00000555221 COL28A1Q2UY09 1125 aa5.6□□□□□ -1.51
CKS1BP1-201ENST00000555221 USP41Q3LFD5 358 aa5.6□□□□□ -1.51
CKS1BP1-201ENST00000555221 C6orf141Q5SZD1 244 aa5.6□□□□□ -1.51
CKS1BP1-201ENST00000555221 LCTLQ6UWM7 567 aa5.6□□□□□ -1.51
CKS1BP1-201ENST00000555221 PIP4P1Q86T03 277 aa5.6□□□□□ -1.51
CKS1BP1-201ENST00000555221 C1orf131Q8NDD1 294 aaKnown RBP5.6□□□□□ -1.51
CKS1BP1-201ENST00000555221 ENGASEQ8NFI3 743 aa5.6□□□□□ -1.51
CKS1BP1-201ENST00000555221 BEST2Q8NFU1 509 aa5.6□□□□□ -1.51
CKS1BP1-201ENST00000555221 NTN5Q8WTR8 489 aaPredicted RBP5.6□□□□□ -1.51
CKS1BP1-201ENST00000555221 C1orf74Q96LT6 269 aa5.6□□□□□ -1.51
CKS1BP1-201ENST00000555221 NEUROD6Q96NK8 337 aa5.6□□□□□ -1.51
CKS1BP1-201ENST00000555221 NCAPGQ9BPX3 1015 aa5.6□□□□□ -1.51
CKS1BP1-201ENST00000555221 TMEM79Q9BSE2 394 aa5.6□□□□□ -1.51
CKS1BP1-201ENST00000555221 MAK16Q9BXY0 300 aaKnown RBP5.6□□□□□ -1.51
CKS1BP1-201ENST00000555221 ZNF215Q9UL58 517 aaPredicted RBP5.6□□□□□ -1.51
CKS1BP1-201ENST00000555221 TTLL3Q9Y4R7 772 aa5.6□□□□□ -1.51
CKS1BP1-201ENST00000555221 SRPRBQ9Y5M8 271 aaKnown RBP5.6□□□□□ -1.51
CKS1BP1-201ENST00000555221 TMEM272A0A1B0GTI8 110 aa5.59□□□□□ -1.51
CKS1BP1-201ENST00000555221 FRMD3A2A2Y4 597 aa5.59□□□□□ -1.51
CKS1BP1-201ENST00000555221 AGAP14A8MT82 685 aa5.59□□□□□ -1.51
CKS1BP1-201ENST00000555221 A8MZ25 164 aa5.59□□□□□ -1.51
CKS1BP1-201ENST00000555221 IFNL4K9M1U5 179 aa5.59□□□□□ -1.51
CKS1BP1-201ENST00000555221 NDUFS3O75489 264 aa5.59□□□□□ -1.51
CKS1BP1-201ENST00000555221 SLC25A12O75746 678 aa5.59□□□□□ -1.51
CKS1BP1-201ENST00000555221 NDUFB4O95168 129 aa5.59□□□□□ -1.51
CKS1BP1-201ENST00000555221 MMP2P08253 660 aa5.59□□□□□ -1.51
CKS1BP1-201ENST00000555221 CSH1P0DML2 217 aa5.59□□□□□ -1.51
CKS1BP1-201ENST00000555221 CSH2P0DML3 217 aa5.59□□□□□ -1.51
CKS1BP1-201ENST00000555221 PRF1P14222 555 aa5.59□□□□□ -1.51
CKS1BP1-201ENST00000555221 CD58P19256 250 aa5.59□□□□□ -1.51
CKS1BP1-201ENST00000555221 PLCD1P51178 756 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms