RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 TDRD5Q8NAT2 981 aaKnown RBP16.68■□□□□ 0.26
PCNX1-209ENST00000554879 KREMEN2Q8NCW0 462 aa16.68■□□□□ 0.26
PCNX1-209ENST00000554879 MARCH5Q9NX47 278 aa16.68■□□□□ 0.26
PCNX1-209ENST00000554879 WASF2Q9Y6W5 498 aa16.68■□□□□ 0.26
PCNX1-209ENST00000554879 TRIM64CA6NLI5 447 aa16.68■□□□□ 0.26
PCNX1-209ENST00000554879 GLRA3O75311 464 aa16.68■□□□□ 0.26
PCNX1-209ENST00000554879 DGKIO75912 1065 aa16.68■□□□□ 0.26
PCNX1-209ENST00000554879 FGFR3P22607 806 aa16.68■□□□□ 0.26
PCNX1-209ENST00000554879 GALNT2Q10471 571 aa16.68■□□□□ 0.26
PCNX1-209ENST00000554879 PPIGQ13427 754 aaKnown RBP eCLIP16.68■□□□□ 0.264e-6■□□□□ 8.2
PCNX1-209ENST00000554879 ADGRD1Q6QNK2 874 aa16.68■□□□□ 0.26
PCNX1-209ENST00000554879 BADQ92934 168 aa16.68■□□□□ 0.26
PCNX1-209ENST00000554879 IGSF8Q969P0 613 aa16.68■□□□□ 0.26
PCNX1-209ENST00000554879 ZNF333Q96JL9 665 aa16.68■□□□□ 0.26
PCNX1-209ENST00000554879 AGAP2Q99490 1192 aa16.68■□□□□ 0.26
PCNX1-209ENST00000554879 MRPL46Q9H2W6 279 aaKnown RBP16.68■□□□□ 0.26
PCNX1-209ENST00000554879 IGSF9Q9P2J2 1179 aa16.68■□□□□ 0.26
PCNX1-209ENST00000554879 ARIH1Q9Y4X5 557 aaPredicted RBP16.68■□□□□ 0.26
PCNX1-209ENST00000554879 WDR81Q562E7 1941 aa16.68■□□□□ 0.26
PCNX1-209ENST00000554879 GOLGA4Q13439 2230 aaKnown RBP16.68■□□□□ 0.26
PCNX1-209ENST00000554879 NMBRP28336 390 aa16.68■□□□□ 0.26
PCNX1-209ENST00000554879 GNA12Q03113 381 aa16.68■□□□□ 0.26
PCNX1-209ENST00000554879 GET4Q7L5D6 327 aaPredicted RBP16.68■□□□□ 0.26
PCNX1-209ENST00000554879 AFAP1L2Q8N4X5 818 aa16.68■□□□□ 0.26
PCNX1-209ENST00000554879 C2orf15Q8WU43 125 aaKnown RBP16.68■□□□□ 0.26
PCNX1-209ENST00000554879 NUF2Q9BZD4 464 aa16.68■□□□□ 0.26
PCNX1-209ENST00000554879 KLHL4Q9C0H6 718 aa16.68■□□□□ 0.26
PCNX1-209ENST00000554879 CYP4F12Q9HCS2 524 aa16.68■□□□□ 0.26
PCNX1-209ENST00000554879 OGDHLQ9ULD0 1010 aa16.68■□□□□ 0.26
PCNX1-209ENST00000554879 TRAV19A0A0A6YYK7 116 aa16.67■□□□□ 0.26
PCNX1-209ENST00000554879 HEATR9A2RTY3 570 aa16.67■□□□□ 0.26
PCNX1-209ENST00000554879 NEMP1O14524 444 aa16.67■□□□□ 0.26
PCNX1-209ENST00000554879 TM9SF1O15321 606 aa16.67■□□□□ 0.26
PCNX1-209ENST00000554879 STMN1P16949 149 aa16.67■□□□□ 0.26
PCNX1-209ENST00000554879 FPGSQ05932 587 aa16.67■□□□□ 0.26
PCNX1-209ENST00000554879 PDAP1Q13442 181 aaKnown RBP16.67■□□□□ 0.26
PCNX1-209ENST00000554879 CSHL1Q14406 222 aa16.67■□□□□ 0.26
PCNX1-209ENST00000554879 LRRC26Q2I0M4 334 aa16.67■□□□□ 0.26
PCNX1-209ENST00000554879 SMYD5Q6GMV2 418 aa16.67■□□□□ 0.26
PCNX1-209ENST00000554879 SERAC1Q96JX3 654 aa16.67■□□□□ 0.26
PCNX1-209ENST00000554879 RABL2AQ9UBK7 228 aaPredicted RBP16.67■□□□□ 0.26
PCNX1-209ENST00000554879 ASMTLO95671 621 aa16.67■□□□□ 0.26
PCNX1-209ENST00000554879 CSE1LP55060 971 aaKnown RBP16.67■□□□□ 0.26
PCNX1-209ENST00000554879 TSTA3Q13630 321 aaPredicted RBP16.67■□□□□ 0.26
PCNX1-209ENST00000554879 PPM1JQ5JR12 505 aa16.67■□□□□ 0.26
PCNX1-209ENST00000554879 PDPK2PQ6A1A2 396 aa16.67■□□□□ 0.26
PCNX1-209ENST00000554879 RETSATQ6NUM9 610 aa16.67■□□□□ 0.26
PCNX1-209ENST00000554879 RSPO2Q6UXX9 243 aaPredicted RBP16.67■□□□□ 0.26
PCNX1-209ENST00000554879 LDB1Q86U70 411 aaPredicted RBP16.67■□□□□ 0.26
PCNX1-209ENST00000554879 ING5Q8WYH8 240 aa16.67■□□□□ 0.26
PCNX1-209ENST00000554879 C2orf78A6NCI8 922 aa16.67■□□□□ 0.26
PCNX1-209ENST00000554879 C2orf81A6NN90 581 aa16.67■□□□□ 0.26
PCNX1-209ENST00000554879 MLNP12872 115 aa16.67■□□□□ 0.26
PCNX1-209ENST00000554879 GPR158Q5T848 1215 aa16.67■□□□□ 0.26
PCNX1-209ENST00000554879 TMEM214Q6NUQ4 689 aaKnown RBP16.67■□□□□ 0.26
PCNX1-209ENST00000554879 ESRP1Q6NXG1 681 aaKnown RBP16.67■□□□□ 0.26
PCNX1-209ENST00000554879 GFM2Q969S9 779 aaKnown RBP16.67■□□□□ 0.26
PCNX1-209ENST00000554879 SIGLEC10Q96LC7 697 aa16.67■□□□□ 0.26
PCNX1-209ENST00000554879 CPNE1Q99829 537 aa16.67■□□□□ 0.26
PCNX1-209ENST00000554879 SMG9Q9H0W8 520 aaKnown RBP16.67■□□□□ 0.26
PCNX1-209ENST00000554879 MOSPD1Q9UJG1 213 aa16.67■□□□□ 0.26
PCNX1-209ENST00000554879 FBXO9Q9UK97 447 aaPredicted RBP16.67■□□□□ 0.26
PCNX1-209ENST00000554879 USP3Q9Y6I4 520 aa16.67■□□□□ 0.26
PCNX1-209ENST00000554879 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.67■□□□□ 0.26
PCNX1-209ENST00000554879 TMEM189-UBE2V1I3L0A0 370 aa16.67■□□□□ 0.26
PCNX1-209ENST00000554879 GPC4O75487 556 aa16.67■□□□□ 0.26
PCNX1-209ENST00000554879 MYL2P10916 166 aa16.67■□□□□ 0.26
PCNX1-209ENST00000554879 TNS4Q8IZW8 715 aa16.67■□□□□ 0.26
PCNX1-209ENST00000554879 NAT16Q8N8M0 369 aa16.67■□□□□ 0.26
PCNX1-209ENST00000554879 PPP2R3CQ969Q6 453 aa16.67■□□□□ 0.26
PCNX1-209ENST00000554879 ATP6V1E2Q96A05 226 aa16.67■□□□□ 0.26
PCNX1-209ENST00000554879 LRGUKQ96M69 825 aa16.67■□□□□ 0.26
PCNX1-209ENST00000554879 BPIFA1Q9NP55 256 aa16.67■□□□□ 0.26
PCNX1-209ENST00000554879 ARMCX1Q9P291 453 aa16.67■□□□□ 0.26
PCNX1-209ENST00000554879 HBS1LQ9Y450 684 aaKnown RBP16.67■□□□□ 0.26
PCNX1-209ENST00000554879 PCDHGC4Q9Y5F7 938 aa16.67■□□□□ 0.26
PCNX1-209ENST00000554879 TEX28O15482 410 aa16.66■□□□□ 0.26
PCNX1-209ENST00000554879 COCHO43405 550 aa16.66■□□□□ 0.26
PCNX1-209ENST00000554879 TAC1P20366 129 aa16.66■□□□□ 0.26
PCNX1-209ENST00000554879 CDK7P50613 346 aa16.66■□□□□ 0.26
PCNX1-209ENST00000554879 ALDH18A1P54886 795 aaKnown RBP16.66■□□□□ 0.26
PCNX1-209ENST00000554879 ITGA9Q13797 1035 aa16.66■□□□□ 0.26
PCNX1-209ENST00000554879 PRKD1Q15139 912 aaPredicted RBP16.66■□□□□ 0.26
PCNX1-209ENST00000554879 LRRC49Q8IUZ0 686 aa16.66■□□□□ 0.26
PCNX1-209ENST00000554879 PRPF18Q99633 342 aaKnown RBP16.66■□□□□ 0.26
PCNX1-209ENST00000554879 CRISPLD1Q9H336 500 aa16.66■□□□□ 0.26
PCNX1-209ENST00000554879 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.66■□□□□ 0.26
PCNX1-209ENST00000554879 NSMCE4AQ9NXX6 385 aa16.66■□□□□ 0.26
PCNX1-209ENST00000554879 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.66■□□□□ 0.26
PCNX1-209ENST00000554879 LGALS13Q9UHV8 139 aa16.66■□□□□ 0.26
PCNX1-209ENST00000554879 ACOT9Q9Y305 439 aa16.66■□□□□ 0.26
PCNX1-209ENST00000554879 ACTL7BQ9Y614 415 aa16.66■□□□□ 0.26
PCNX1-209ENST00000554879 TMEM247A6NEH6 219 aa16.66■□□□□ 0.26
PCNX1-209ENST00000554879 HOXD12P35452 270 aa16.66■□□□□ 0.26
PCNX1-209ENST00000554879 CD151P48509 253 aa16.66■□□□□ 0.26
PCNX1-209ENST00000554879 SCAPQ12770 1279 aa16.66■□□□□ 0.26
PCNX1-209ENST00000554879 TAZQ16635 292 aa16.66■□□□□ 0.26
PCNX1-209ENST00000554879 GRTP1Q5TC63 336 aa16.66■□□□□ 0.26
PCNX1-209ENST00000554879 RAB44Q7Z6P3 723 aaPredicted RBP16.66■□□□□ 0.26
PCNX1-209ENST00000554879 HEATR4Q86WZ0 1026 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms