RNA–Protein interactions for RNA: ENST00000554813.5

APEX1-208, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-208ENST00000554813 RABIFP47224 123 aa13.33□□□□□ -0.28
APEX1-208ENST00000554813 NR2C2P49116 596 aa13.33□□□□□ -0.28
APEX1-208ENST00000554813 LIG3P49916 1009 aa13.33□□□□□ -0.28
APEX1-208ENST00000554813 GSDMDP57764 484 aa13.33□□□□□ -0.28
APEX1-208ENST00000554813 MAXP61244 160 aa13.33□□□□□ -0.28
APEX1-208ENST00000554813 SIM1P81133 766 aaPredicted RBP13.33□□□□□ -0.28
APEX1-208ENST00000554813 IL9RQ01113 521 aa13.33□□□□□ -0.28
APEX1-208ENST00000554813 KIF5AQ12840 1032 aa13.33□□□□□ -0.28
APEX1-208ENST00000554813 MFSD7Q6UXD7 560 aa13.33□□□□□ -0.28
APEX1-208ENST00000554813 KYAT3Q6YP21 454 aaKnown RBP13.33□□□□□ -0.28
APEX1-208ENST00000554813 GCNT7Q6ZNI0 430 aa13.33□□□□□ -0.28
APEX1-208ENST00000554813 PTAR1Q7Z6K3 402 aaPredicted RBP13.33□□□□□ -0.28
APEX1-208ENST00000554813 ZSWIM9Q86XI8 627 aa13.33□□□□□ -0.28
APEX1-208ENST00000554813 TMEM139Q8IV31 216 aa13.33□□□□□ -0.28
APEX1-208ENST00000554813 CCDC13Q8IYE1 715 aa13.33□□□□□ -0.28
APEX1-208ENST00000554813 KATNAL2Q8IYT4 538 aa13.33□□□□□ -0.28
APEX1-208ENST00000554813 NDUFAF2Q8N183 169 aa13.33□□□□□ -0.28
APEX1-208ENST00000554813 ACRBPQ8NEB7 543 aa13.33□□□□□ -0.28
APEX1-208ENST00000554813 OR13H1Q8NG92 308 aa13.33□□□□□ -0.28
APEX1-208ENST00000554813 KIAA1524Q8TCG1 905 aa13.33□□□□□ -0.28
APEX1-208ENST00000554813 PDCD6IPQ8WUM4 868 aaKnown RBP13.33□□□□□ -0.28
APEX1-208ENST00000554813 SPOCK2Q92563 424 aa13.33□□□□□ -0.28
APEX1-208ENST00000554813 CENPTQ96BT3 561 aa13.33□□□□□ -0.28
APEX1-208ENST00000554813 KLF6Q99612 283 aaPredicted RBP13.33□□□□□ -0.28
APEX1-208ENST00000554813 SEMA3CQ99985 751 aa13.33□□□□□ -0.28
APEX1-208ENST00000554813 BRD8Q9H0E9 1235 aa13.33□□□□□ -0.28
APEX1-208ENST00000554813 GOLPH3Q9H4A6 298 aa13.33□□□□□ -0.28
APEX1-208ENST00000554813 SALL4Q9UJQ4 1053 aa13.33□□□□□ -0.28
APEX1-208ENST00000554813 PCOLCE2Q9UKZ9 415 aa13.33□□□□□ -0.28
APEX1-208ENST00000554813 DUSP10Q9Y6W6 482 aa13.33□□□□□ -0.28
APEX1-208ENST00000554813 KNL1Q8NG31 2342 aa13.33□□□□□ -0.28
APEX1-208ENST00000554813 DOCK9Q9BZ29 2069 aa13.32□□□□□ -0.28
APEX1-208ENST00000554813 SPAARA0A1B0GVQ0 90 aa13.32□□□□□ -0.28
APEX1-208ENST00000554813 POM121BA6NF01 834 aa13.32□□□□□ -0.28
APEX1-208ENST00000554813 TOR1BO14657 336 aa13.32□□□□□ -0.28
APEX1-208ENST00000554813 PPP1R12AO14974 1030 aaPredicted RBP13.32□□□□□ -0.28
APEX1-208ENST00000554813 PJA2O43164 708 aa13.32□□□□□ -0.28
APEX1-208ENST00000554813 LZTS3O60299 673 aaPredicted RBP13.32□□□□□ -0.28
APEX1-208ENST00000554813 CBFA2T3O75081 653 aa13.32□□□□□ -0.28
APEX1-208ENST00000554813 KRT10P13645 584 aa13.32□□□□□ -0.28
APEX1-208ENST00000554813 MMP12P39900 470 aa13.32□□□□□ -0.28
APEX1-208ENST00000554813 PPIDQ08752 370 aaKnown RBP13.32□□□□□ -0.28
APEX1-208ENST00000554813 AP1B1Q10567 949 aa13.32□□□□□ -0.28
APEX1-208ENST00000554813 LRRC14Q15048 493 aa13.32□□□□□ -0.28
APEX1-208ENST00000554813 TAZQ16635 292 aa13.32□□□□□ -0.28
APEX1-208ENST00000554813 TFDP3Q5H9I0 405 aa13.32□□□□□ -0.28
APEX1-208ENST00000554813 ARMC12Q5T9G4 340 aa13.32□□□□□ -0.28
APEX1-208ENST00000554813 SPOCD1Q6ZMY3 1216 aa13.32□□□□□ -0.28
APEX1-208ENST00000554813 CCDC50Q8IVM0 306 aa13.32□□□□□ -0.28
APEX1-208ENST00000554813 EXD1Q8NHP7 514 aa13.32□□□□□ -0.28
APEX1-208ENST00000554813 SAP25Q8TEE9 199 aa13.32□□□□□ -0.28
APEX1-208ENST00000554813 IFT43Q96FT9 208 aa13.32□□□□□ -0.28
APEX1-208ENST00000554813 RBM41Q96IZ5 413 aaKnown RBP13.32□□□□□ -0.28
APEX1-208ENST00000554813 LGMNQ99538 433 aa13.32□□□□□ -0.28
APEX1-208ENST00000554813 LACRTQ9GZZ8 138 aa13.32□□□□□ -0.28
APEX1-208ENST00000554813 PHTF1Q9UMS5 762 aa13.32□□□□□ -0.28
APEX1-208ENST00000554813 TTLL3Q9Y4R7 772 aa13.32□□□□□ -0.28
APEX1-208ENST00000554813 CST8O60676 142 aa13.31□□□□□ -0.28
APEX1-208ENST00000554813 CPP00450 1065 aa13.31□□□□□ -0.28
APEX1-208ENST00000554813 JCHAINP01591 159 aa13.31□□□□□ -0.28
APEX1-208ENST00000554813 PRKCGP05129 697 aa13.31□□□□□ -0.28
APEX1-208ENST00000554813 C6P13671 934 aa13.31□□□□□ -0.28
APEX1-208ENST00000554813 CA4P22748 312 aa13.31□□□□□ -0.28
APEX1-208ENST00000554813 EPHA8P29322 1005 aaPredicted RBP13.31□□□□□ -0.28
APEX1-208ENST00000554813 COPS2P61201 443 aa13.31□□□□□ -0.28
APEX1-208ENST00000554813 YPEL5P62699 121 aa13.31□□□□□ -0.28
APEX1-208ENST00000554813 DYNLT1P63172 113 aa13.31□□□□□ -0.28
APEX1-208ENST00000554813 BNIP3Q12983 259 aa13.31□□□□□ -0.28
APEX1-208ENST00000554813 PTK2BQ14289 1009 aa13.31□□□□□ -0.28
APEX1-208ENST00000554813 SHBQ15464 509 aa13.31□□□□□ -0.28
APEX1-208ENST00000554813 KAZNQ674X7 775 aa13.31□□□□□ -0.28
APEX1-208ENST00000554813 ALG1LQ6GMV1 187 aa13.31□□□□□ -0.28
APEX1-208ENST00000554813 DPPA4Q7L190 304 aa13.31□□□□□ -0.28
APEX1-208ENST00000554813 GLRX5Q86SX6 157 aa13.31□□□□□ -0.28
APEX1-208ENST00000554813 GATAD2AQ86YP4 633 aa13.31□□□□□ -0.28
APEX1-208ENST00000554813 LRRN4Q8WUT4 740 aa13.31□□□□□ -0.28
APEX1-208ENST00000554813 P3H4Q92791 437 aa13.31□□□□□ -0.28
APEX1-208ENST00000554813 NSMCE3Q96MG7 304 aa13.31□□□□□ -0.28
APEX1-208ENST00000554813 PCDHA3Q9Y5H8 950 aa13.31□□□□□ -0.28
APEX1-208ENST00000554813 RAI2Q9Y5P3 530 aa13.31□□□□□ -0.28
APEX1-208ENST00000554813 CNOT1A5YKK6 2376 aaKnown RBP13.31□□□□□ -0.28
APEX1-208ENST00000554813 PCNX2A6NKB5 2137 aa13.31□□□□□ -0.28
APEX1-208ENST00000554813 SHROOM3Q8TF72 1996 aa13.31□□□□□ -0.28
APEX1-208ENST00000554813 TMEM131Q92545 1883 aa13.3□□□□□ -0.28
APEX1-208ENST00000554813 SPTY2D1-AS1A0A0U1RR47 76 aa13.3□□□□□ -0.28
APEX1-208ENST00000554813 CCDC66A2RUB6 948 aa13.3□□□□□ -0.28
APEX1-208ENST00000554813 KCNK1O00180 336 aa13.3□□□□□ -0.28
APEX1-208ENST00000554813 PGLSO95336 258 aa13.3□□□□□ -0.28
APEX1-208ENST00000554813 TRIM16O95361 564 aa13.3□□□□□ -0.28
APEX1-208ENST00000554813 ELFN1P0C7U0 828 aa13.3□□□□□ -0.28
APEX1-208ENST00000554813 CYP2A6P11509 494 aaPredicted RBP13.3□□□□□ -0.28
APEX1-208ENST00000554813 TGM2P21980 687 aa13.3□□□□□ -0.28
APEX1-208ENST00000554813 CTNNA1P35221 906 aaKnown RBP13.3□□□□□ -0.28
APEX1-208ENST00000554813 CETN2P41208 172 aa13.3□□□□□ -0.28
APEX1-208ENST00000554813 THOP1P52888 689 aa13.3□□□□□ -0.28
APEX1-208ENST00000554813 PFN3P60673 137 aa13.3□□□□□ -0.28
APEX1-208ENST00000554813 IFI35P80217 286 aaPredicted RBP13.3□□□□□ -0.28
APEX1-208ENST00000554813 SEMG2Q02383 582 aa13.3□□□□□ -0.28
APEX1-208ENST00000554813 DSC2Q02487 901 aa13.3□□□□□ -0.28
APEX1-208ENST00000554813 TRAF2Q12933 501 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms