RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 SCNM1Q9BWG6 230 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 INTS2Q9H0H0 1204 aaKnown RBP1.63□□□□□ -2.15
PRPF39-208ENST00000554785 FOXP1Q9H334 677 aaPredicted RBP1.63□□□□□ -2.15
PRPF39-208ENST00000554785 IRAK4Q9NWZ3 460 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 PPP1R14DQ9NXH3 145 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 HDAC6Q9UBN7 1215 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 ZNF112Q9UJU3 913 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 OSGIN2Q9Y236 505 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 TRIP12Q14669 1992 aaPredicted RBP1.63□□□□□ -2.15
PRPF39-208ENST00000554785 MYH14Q7Z406 1995 aaKnown RBP1.63□□□□□ -2.15
PRPF39-208ENST00000554785 ZFHX4Q86UP3 3567 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 SLIT3O75094 1523 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 ANKRD36BQ8N2N9 1353 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 CARMIL3Q8ND23 1372 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 DNAH14Q0VDD8 3507 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 SPATA31E1Q6ZUB1 1445 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 OR6C68A6NDL8 312 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 GLTPD2A6NH11 291 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 B4E171 279 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 TEX22C9J3V5 150 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 F8W810 466 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 RHODO00212 210 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 SOCS2O14508 198 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 PER2O15055 1255 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 PRPF4O43172 522 aaKnown RBP eCLIP1.63□□□□□ -2.15
PRPF39-208ENST00000554785 TLR2O60603 784 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 CBX6O95503 412 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 WNT1P04628 370 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 LCKP06239 509 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 CHRM4P08173 479 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 FGF2P09038 288 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 CTSAP10619 480 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 KLRC2P26717 231 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 ABCD3P28288 659 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 CIITAP33076 1130 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 TSPAN7P41732 249 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 PTPN9P43378 593 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 MAPRE1Q15691 268 aaKnown RBP1.63□□□□□ -2.15
PRPF39-208ENST00000554785 DEFB115Q30KQ5 88 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 ZNF766Q5HY98 468 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 UBAP2Q5T6F2 1119 aaKnown RBP1.63□□□□□ -2.15
PRPF39-208ENST00000554785 FAM69AQ5T7M9 428 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 PXDC1Q5TGL8 231 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 TMEM268Q5VZI3 342 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 RUSC1-AS1Q66K80 236 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 TTLL5Q6EMB2 1281 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 FAAH2Q6GMR7 532 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 ISM2Q6H9L7 571 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 NAPEPLDQ6IQ20 393 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 IGFN1Q86VF2 1251 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 CCDC25Q86WR0 208 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 ARMC8Q8IUR7 673 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 GHDCQ8N2G8 530 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 SCAIQ8N9R8 606 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 SETD9Q8NE22 299 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 TBC1D22AQ8WUA7 517 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 RAB40AQ8WXH6 277 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 HSPH1Q92598 858 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 HDAC2Q92769 488 aaKnown RBP1.63□□□□□ -2.15
PRPF39-208ENST00000554785 KAT2AQ92830 837 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 CUL5Q93034 780 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 SKA1Q96BD8 255 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 ELP4Q96EB1 424 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 CLMNQ96JQ2 1002 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 FRG2BQ96QU4 278 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 EYA3Q99504 573 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 CLSTN3Q9BQT9 956 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 TUBB6Q9BUF5 446 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 IFT27Q9BW83 186 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 FRMD8Q9BZ67 464 aaPredicted RBP1.63□□□□□ -2.15
PRPF39-208ENST00000554785 LMAN2LQ9H0V9 348 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 HIPK3Q9H422 1215 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 EBF3Q9H4W6 596 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 EPHX3Q9H6B9 360 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 ZNF304Q9HCX3 659 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 PAPOLBQ9NRJ5 636 aaKnown RBP1.63□□□□□ -2.15
PRPF39-208ENST00000554785 SMC4Q9NTJ3 1288 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 TMEM45AQ9NWC5 275 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 BEX4Q9NWD9 120 aaPredicted RBP1.63□□□□□ -2.15
PRPF39-208ENST00000554785 HCN3Q9P1Z3 774 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 SLC25A10Q9UBX3 287 aaPredicted RBP1.63□□□□□ -2.15
PRPF39-208ENST00000554785 UTS2RQ9UKP6 389 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 ICKQ9UPZ9 632 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 LAMP3Q9UQV4 416 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 CNPY2Q9Y2B0 182 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 LRP12Q9Y561 859 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 FAM208AQ9UK61 1670 aaKnown RBP1.63□□□□□ -2.15
PRPF39-208ENST00000554785 AKAP11Q9UKA4 1901 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 DICER1Q9UPY3 1922 aaKnown RBP1.63□□□□□ -2.15
PRPF39-208ENST00000554785 NFAT5O94916 1531 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 ASPMQ8IZT6 3477 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 EIF3AQ14152 1382 aaKnown RBP1.62□□□□□ -2.15
PRPF39-208ENST00000554785 CCDC7Q96M83 1385 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 CFAP54Q96N23 3096 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 TRPM7Q96QT4 1865 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 DMDP11532 3685 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 C10orf71Q711Q0 1435 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 DLEC1Q9Y238 1755 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 KIR2DS5A0A0G2JLQ3 304 aa1.62□□□□□ -2.15
PRPF39-208ENST00000554785 TARSL2A2RTX5 802 aaKnown RBP1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms