RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 RFX5P48382 616 aaPredicted RBP5.35□□□□□ -1.55
CHD8-207ENST00000554384 PMS2P54278 862 aa5.35□□□□□ -1.55
CHD8-207ENST00000554384 P2RX3P56373 397 aa5.35□□□□□ -1.55
CHD8-207ENST00000554384 C21orf58P58505 322 aa5.35□□□□□ -1.55
CHD8-207ENST00000554384 TRAF1Q13077 416 aa5.35□□□□□ -1.55
CHD8-207ENST00000554384 ARHGEF6Q15052 776 aa5.35□□□□□ -1.55
CHD8-207ENST00000554384 HIST2H2ACQ16777 129 aaPredicted RBP5.35□□□□□ -1.55
CHD8-207ENST00000554384 PLEKHO1Q53GL0 409 aaPredicted RBP5.35□□□□□ -1.55
CHD8-207ENST00000554384 WASHC2DQ5SRD0 308 aa5.35□□□□□ -1.55
CHD8-207ENST00000554384 MORN5Q5VZ52 161 aa5.35□□□□□ -1.55
CHD8-207ENST00000554384 C16orf54Q6UWD8 224 aa5.35□□□□□ -1.55
CHD8-207ENST00000554384 LCTLQ6UWM7 567 aa5.35□□□□□ -1.55
CHD8-207ENST00000554384 CCDC129Q6ZRS4 1044 aa5.35□□□□□ -1.55
CHD8-207ENST00000554384 ZDHHC23Q8IYP9 409 aa5.35□□□□□ -1.55
CHD8-207ENST00000554384 TMEM199Q8N511 208 aa5.35□□□□□ -1.55
CHD8-207ENST00000554384 PARP16Q8N5Y8 322 aa5.35□□□□□ -1.55
CHD8-207ENST00000554384 ZKSCAN4Q969J2 545 aaPredicted RBP5.35□□□□□ -1.55
CHD8-207ENST00000554384 MXRA8Q9BRK3 442 aa5.35□□□□□ -1.55
CHD8-207ENST00000554384 H2AFJQ9BTM1 129 aa5.35□□□□□ -1.55
CHD8-207ENST00000554384 CDT1Q9H211 546 aa5.35□□□□□ -1.55
CHD8-207ENST00000554384 MUC13Q9H3R2 512 aa5.35□□□□□ -1.55
CHD8-207ENST00000554384 KLHL31Q9H511 634 aa5.35□□□□□ -1.55
CHD8-207ENST00000554384 DDX4Q9NQI0 724 aaKnown RBP5.35□□□□□ -1.55
CHD8-207ENST00000554384 TUBA8Q9NY65 449 aaPredicted RBP5.35□□□□□ -1.55
CHD8-207ENST00000554384 ADD3Q9UEY8 706 aaKnown RBP5.35□□□□□ -1.55
CHD8-207ENST00000554384 HAO1Q9UJM8 370 aa5.35□□□□□ -1.55
CHD8-207ENST00000554384 CARD8Q9Y2G2 431 aa5.35□□□□□ -1.55
CHD8-207ENST00000554384 SLC45A1Q9Y2W3 748 aa5.35□□□□□ -1.55
CHD8-207ENST00000554384 LAS1LQ9Y4W2 734 aaKnown RBP5.35□□□□□ -1.55
CHD8-207ENST00000554384 A3GALT2U3KPV4 340 aa5.35□□□□□ -1.55
CHD8-207ENST00000554384 NUP160Q12769 1436 aa5.34□□□□□ -1.55
CHD8-207ENST00000554384 A0A0U1RQF3 1178 aa5.34□□□□□ -1.55
CHD8-207ENST00000554384 PTGES3LE9PB15 166 aa5.34□□□□□ -1.55
CHD8-207ENST00000554384 MDM4O15151 490 aa5.34□□□□□ -1.55
CHD8-207ENST00000554384 AHCYL1O43865 530 aa5.34□□□□□ -1.55
CHD8-207ENST00000554384 HNRNPCL1O60812 293 aaKnown RBP5.34□□□□□ -1.55
CHD8-207ENST00000554384 PAGE4O60829 102 aa5.34□□□□□ -1.55
CHD8-207ENST00000554384 SCGB1D1O95968 90 aa5.34□□□□□ -1.55
CHD8-207ENST00000554384 MT-CYBP00156 380 aaPredicted RBP5.34□□□□□ -1.55
CHD8-207ENST00000554384 IFNA2P01563 188 aa5.34□□□□□ -1.55
CHD8-207ENST00000554384 CBSLP0DN79 551 aa5.34□□□□□ -1.55
CHD8-207ENST00000554384 ENO3P13929 434 aaPredicted RBP5.34□□□□□ -1.55
CHD8-207ENST00000554384 CBSP35520 551 aa5.34□□□□□ -1.55
CHD8-207ENST00000554384 F2RL1P55085 397 aa5.34□□□□□ -1.55
CHD8-207ENST00000554384 SELENOVP59797 346 aa5.34□□□□□ -1.55
CHD8-207ENST00000554384 CCNG2Q16589 344 aa5.34□□□□□ -1.55
CHD8-207ENST00000554384 SGO1Q5FBB7 561 aa5.34□□□□□ -1.55
CHD8-207ENST00000554384 COLEC12Q5KU26 742 aa5.34□□□□□ -1.55
CHD8-207ENST00000554384 SYCE2Q6PIF2 218 aa5.34□□□□□ -1.55
CHD8-207ENST00000554384 QSOX2Q6ZRP7 698 aa5.34□□□□□ -1.55
CHD8-207ENST00000554384 DENND6AQ8IWF6 608 aa5.34□□□□□ -1.55
CHD8-207ENST00000554384 SLC35F3Q8IY50 421 aa5.34□□□□□ -1.55
CHD8-207ENST00000554384 CCDC13Q8IYE1 715 aa5.34□□□□□ -1.55
CHD8-207ENST00000554384 ZCCHC9Q8N567 271 aaKnown RBP5.34□□□□□ -1.55
CHD8-207ENST00000554384 NRACQ8N912 160 aa5.34□□□□□ -1.55
CHD8-207ENST00000554384 SMARCE1Q969G3 411 aa5.34□□□□□ -1.55
CHD8-207ENST00000554384 SLC25A28Q96A46 364 aa5.34□□□□□ -1.55
CHD8-207ENST00000554384 MMABQ96EY8 250 aaPredicted RBP5.34□□□□□ -1.55
CHD8-207ENST00000554384 APOLD1Q96LR9 279 aa5.34□□□□□ -1.55
CHD8-207ENST00000554384 TREX2Q9BQ50 279 aaPredicted RBP5.34□□□□□ -1.55
CHD8-207ENST00000554384 PRKRIP1Q9H875 184 aaPredicted RBP5.34□□□□□ -1.55
CHD8-207ENST00000554384 FBRSL1Q9HCM7 1045 aaKnown RBP5.34□□□□□ -1.55
CHD8-207ENST00000554384 SIRT3Q9NTG7 399 aaPredicted RBP5.34□□□□□ -1.55
CHD8-207ENST00000554384 ZBTB40Q9NUA8 1239 aa5.34□□□□□ -1.55
CHD8-207ENST00000554384 ABI3Q9P2A4 366 aa5.34□□□□□ -1.55
CHD8-207ENST00000554384 ADCY10Q96PN6 1610 aa5.34□□□□□ -1.56
CHD8-207ENST00000554384 ZNF804BA4D1E1 1349 aa5.33□□□□□ -1.56
CHD8-207ENST00000554384 H0YGN5 161 aa5.33□□□□□ -1.56
CHD8-207ENST00000554384 LDB2O43679 373 aa5.33□□□□□ -1.56
CHD8-207ENST00000554384 ZC3H11AO75152 810 aaKnown RBP eCLIP5.33□□□□□ -1.56
CHD8-207ENST00000554384 NKX2-2O95096 273 aa5.33□□□□□ -1.56
CHD8-207ENST00000554384 CCNDBP1O95273 360 aa5.33□□□□□ -1.56
CHD8-207ENST00000554384 ETFAP13804 333 aa5.33□□□□□ -1.56
CHD8-207ENST00000554384 TM4SF1P30408 202 aa5.33□□□□□ -1.56
CHD8-207ENST00000554384 PTGER1P34995 402 aa5.33□□□□□ -1.56
CHD8-207ENST00000554384 ACTN2P35609 894 aa5.33□□□□□ -1.56
CHD8-207ENST00000554384 PPARGP37231 505 aaPredicted RBP5.33□□□□□ -1.56
CHD8-207ENST00000554384 PIGAP37287 484 aa5.33□□□□□ -1.56
CHD8-207ENST00000554384 ARL1P40616 181 aaPredicted RBP5.33□□□□□ -1.56
CHD8-207ENST00000554384 GARSP41250 739 aaKnown RBP5.33□□□□□ -1.56
CHD8-207ENST00000554384 FAM27E3Q08E93 113 aa5.33□□□□□ -1.56
CHD8-207ENST00000554384 PTGR1Q14914 329 aa5.33□□□□□ -1.56
CHD8-207ENST00000554384 DUSP6Q16828 381 aa5.33□□□□□ -1.56
CHD8-207ENST00000554384 C2orf68Q2NKX9 166 aa5.33□□□□□ -1.56
CHD8-207ENST00000554384 CXorf66Q5JRM2 361 aaPredicted RBP5.33□□□□□ -1.56
CHD8-207ENST00000554384 Q5PR19 223 aa5.33□□□□□ -1.56
CHD8-207ENST00000554384 MANEAQ5SRI9 462 aa5.33□□□□□ -1.56
CHD8-207ENST00000554384 SPATA1Q5VX52 437 aa5.33□□□□□ -1.56
CHD8-207ENST00000554384 KLHL35Q6PF15 583 aa5.33□□□□□ -1.56
CHD8-207ENST00000554384 NCEH1Q6PIU2 408 aa5.33□□□□□ -1.56
CHD8-207ENST00000554384 CAMK1DQ8IU85 385 aa5.33□□□□□ -1.56
CHD8-207ENST00000554384 RBFAQ8N0V3 343 aa5.33□□□□□ -1.56
CHD8-207ENST00000554384 MMP21Q8N119 569 aa5.33□□□□□ -1.56
CHD8-207ENST00000554384 ERGIC1Q969X5 290 aa5.33□□□□□ -1.56
CHD8-207ENST00000554384 ZNF333Q96JL9 665 aa5.33□□□□□ -1.56
CHD8-207ENST00000554384 TRMOQ9BU70 441 aa5.33□□□□□ -1.56
CHD8-207ENST00000554384 C1QTNF5Q9BXJ0 243 aa5.33□□□□□ -1.56
CHD8-207ENST00000554384 ISCUQ9H1K1 167 aa5.33□□□□□ -1.56
CHD8-207ENST00000554384 FOXP1Q9H334 677 aaPredicted RBP5.33□□□□□ -1.56
CHD8-207ENST00000554384 MAGEE1Q9HCI5 957 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms