RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 WDR48Q8TAF3 677 aa11.68□□□□□ -0.54
TUBB3-204ENST00000554116 HTR3CQ8WXA8 447 aa11.68□□□□□ -0.54
TUBB3-204ENST00000554116 EXTL1Q92935 676 aa11.68□□□□□ -0.54
TUBB3-204ENST00000554116 CCDC74AQ96AQ1 378 aa11.68□□□□□ -0.54
TUBB3-204ENST00000554116 EPAS1Q99814 870 aa11.68□□□□□ -0.54
TUBB3-204ENST00000554116 FUCA2Q9BTY2 467 aa11.68□□□□□ -0.54
TUBB3-204ENST00000554116 RTN4Q9NQC3 1192 aaKnown RBP11.68□□□□□ -0.54
TUBB3-204ENST00000554116 GULP1Q9UBP9 304 aa11.68□□□□□ -0.54
TUBB3-204ENST00000554116 OR12D3Q9UGF7 316 aa11.68□□□□□ -0.54
TUBB3-204ENST00000554116 SYCE3A1L190 88 aa11.67□□□□□ -0.54
TUBB3-204ENST00000554116 KDELR3O43731 214 aa11.67□□□□□ -0.54
TUBB3-204ENST00000554116 TMCC1O94876 653 aa11.67□□□□□ -0.54
TUBB3-204ENST00000554116 RHOQP17081 205 aa11.67□□□□□ -0.54
TUBB3-204ENST00000554116 ITIH1P19827 911 aa11.67□□□□□ -0.54
TUBB3-204ENST00000554116 MMP8P22894 467 aa11.67□□□□□ -0.54
TUBB3-204ENST00000554116 CCKBRP32239 447 aa11.67□□□□□ -0.54
TUBB3-204ENST00000554116 ARSDP51689 593 aa11.67□□□□□ -0.54
TUBB3-204ENST00000554116 THOP1P52888 689 aa11.67□□□□□ -0.54
TUBB3-204ENST00000554116 PPARDQ03181 441 aa11.67□□□□□ -0.54
TUBB3-204ENST00000554116 ZFP36L1Q07352 338 aaKnown RBP11.67□□□□□ -0.54
TUBB3-204ENST00000554116 PTK2BQ14289 1009 aa11.67□□□□□ -0.54
TUBB3-204ENST00000554116 TMEM52BQ4KMG9 183 aa11.67□□□□□ -0.54
TUBB3-204ENST00000554116 COLEC12Q5KU26 742 aa11.67□□□□□ -0.54
TUBB3-204ENST00000554116 FAXCQ5TGI0 409 aa11.67□□□□□ -0.54
TUBB3-204ENST00000554116 OGFOD3Q6PK18 319 aa11.67□□□□□ -0.54
TUBB3-204ENST00000554116 GDPD4Q6W3E5 623 aa11.67□□□□□ -0.54
TUBB3-204ENST00000554116 TRIM72Q6ZMU5 477 aa11.67□□□□□ -0.54
TUBB3-204ENST00000554116 ZNF574Q6ZN55 896 aaPredicted RBP11.67□□□□□ -0.54
TUBB3-204ENST00000554116 PHLDB2Q86SQ0 1253 aa11.67□□□□□ -0.54
TUBB3-204ENST00000554116 TTC7BQ86TV6 843 aa11.67□□□□□ -0.54
TUBB3-204ENST00000554116 ZSWIM9Q86XI8 627 aa11.67□□□□□ -0.54
TUBB3-204ENST00000554116 FBXO39Q8N4B4 442 aa11.67□□□□□ -0.54
TUBB3-204ENST00000554116 CCDC185Q8N715 623 aa11.67□□□□□ -0.54
TUBB3-204ENST00000554116 ARL10Q8N8L6 244 aa11.67□□□□□ -0.54
TUBB3-204ENST00000554116 GPR156Q8NFN8 814 aa11.67□□□□□ -0.54
TUBB3-204ENST00000554116 CENPIQ92674 756 aaPredicted RBP11.67□□□□□ -0.54
TUBB3-204ENST00000554116 NSMCE3Q96MG7 304 aa11.67□□□□□ -0.54
TUBB3-204ENST00000554116 PCDHB18PQ96TA0 734 aa11.67□□□□□ -0.54
TUBB3-204ENST00000554116 WRAP53Q9BUR4 548 aaKnown RBP11.67□□□□□ -0.54
TUBB3-204ENST00000554116 EDEM3Q9BZQ6 932 aa11.67□□□□□ -0.54
TUBB3-204ENST00000554116 SLC13A1Q9BZW2 595 aa11.67□□□□□ -0.54
TUBB3-204ENST00000554116 MAGEH1Q9H213 219 aa11.67□□□□□ -0.54
TUBB3-204ENST00000554116 TMEM51Q9NW97 253 aa11.67□□□□□ -0.54
TUBB3-204ENST00000554116 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.67□□□□□ -0.54
TUBB3-204ENST00000554116 SIRPGQ9P1W8 387 aa11.67□□□□□ -0.54
TUBB3-204ENST00000554116 MFHAS1Q9Y4C4 1052 aa11.67□□□□□ -0.54
TUBB3-204ENST00000554116 C2CD4BA6NLJ0 364 aa11.66□□□□□ -0.54
TUBB3-204ENST00000554116 NEMP1O14524 444 aa11.66□□□□□ -0.54
TUBB3-204ENST00000554116 BUB1BO60566 1050 aaPredicted RBP11.66□□□□□ -0.54
TUBB3-204ENST00000554116 TM7SF2O76062 418 aa11.66□□□□□ -0.54
TUBB3-204ENST00000554116 CCDC172P0C7W6 258 aa11.66□□□□□ -0.54
TUBB3-204ENST00000554116 UNGP13051 313 aaPredicted RBP11.66□□□□□ -0.54
TUBB3-204ENST00000554116 GM2AP17900 193 aa11.66□□□□□ -0.54
TUBB3-204ENST00000554116 PTMSP20962 102 aa11.66□□□□□ -0.54
TUBB3-204ENST00000554116 MAPKAPK2P49137 400 aa11.66□□□□□ -0.54
TUBB3-204ENST00000554116 RPIAP49247 311 aa11.66□□□□□ -0.54
TUBB3-204ENST00000554116 HDAC4P56524 1084 aa11.66□□□□□ -0.54
TUBB3-204ENST00000554116 SNRPD1P62314 119 aaKnown RBP11.66□□□□□ -0.54
TUBB3-204ENST00000554116 PTP4A2Q12974 167 aa11.66□□□□□ -0.54
TUBB3-204ENST00000554116 IQCB1Q15051 598 aa11.66□□□□□ -0.54
TUBB3-204ENST00000554116 CYTH1Q15438 398 aa11.66□□□□□ -0.54
TUBB3-204ENST00000554116 LVRNQ6Q4G3 990 aa11.66□□□□□ -0.54
TUBB3-204ENST00000554116 DTX1Q86Y01 620 aa11.66□□□□□ -0.54
TUBB3-204ENST00000554116 HID1Q8IV36 788 aa11.66□□□□□ -0.54
TUBB3-204ENST00000554116 PYROXD2Q8N2H3 581 aa11.66□□□□□ -0.54
TUBB3-204ENST00000554116 PELI3Q8N2H9 469 aa11.66□□□□□ -0.54
TUBB3-204ENST00000554116 RYBPQ8N488 228 aaPredicted RBP11.66□□□□□ -0.54
TUBB3-204ENST00000554116 PLA2G15Q8NCC3 412 aa11.66□□□□□ -0.54
TUBB3-204ENST00000554116 RXFP2Q8WXD0 754 aa11.66□□□□□ -0.54
TUBB3-204ENST00000554116 GFM1Q96RP9 751 aaKnown RBP11.66□□□□□ -0.54
TUBB3-204ENST00000554116 AGPAT1Q99943 283 aa11.66□□□□□ -0.54
TUBB3-204ENST00000554116 C11orf70Q9BRQ4 267 aa11.66□□□□□ -0.54
TUBB3-204ENST00000554116 APOOQ9BUR5 198 aa11.66□□□□□ -0.54
TUBB3-204ENST00000554116 OSBPL1AQ9BXW6 950 aa11.66□□□□□ -0.54
TUBB3-204ENST00000554116 CPEB1Q9BZB8 566 aaKnown RBP11.66□□□□□ -0.54
TUBB3-204ENST00000554116 TTYH3Q9C0H2 523 aa11.66□□□□□ -0.54
TUBB3-204ENST00000554116 LRRN3Q9H3W5 708 aa11.66□□□□□ -0.54
TUBB3-204ENST00000554116 EPB41L5Q9HCM4 733 aa11.66□□□□□ -0.54
TUBB3-204ENST00000554116 METTL5Q9NRN9 209 aaKnown RBP11.66□□□□□ -0.54
TUBB3-204ENST00000554116 SEPT11Q9NVA2 429 aaKnown RBP11.66□□□□□ -0.54
TUBB3-204ENST00000554116 FOXJ2Q9P0K8 574 aa11.66□□□□□ -0.54
TUBB3-204ENST00000554116 DKK3Q9UBP4 350 aa11.66□□□□□ -0.54
TUBB3-204ENST00000554116 LHX3Q9UBR4 397 aa11.66□□□□□ -0.54
TUBB3-204ENST00000554116 OR1A2Q9Y585 309 aa11.66□□□□□ -0.54
TUBB3-204ENST00000554116 PAXBP1Q9Y5B6 917 aa11.66□□□□□ -0.54
TUBB3-204ENST00000554116 ITPR2Q14571 2701 aa11.66□□□□□ -0.54
TUBB3-204ENST00000554116 ZFC3H1O60293 1989 aaKnown RBP11.65□□□□□ -0.54
TUBB3-204ENST00000554116 UNC79Q9P2D8 2635 aa11.65□□□□□ -0.54
TUBB3-204ENST00000554116 TSPAN11A1L157 253 aa11.65□□□□□ -0.54
TUBB3-204ENST00000554116 TMEM202A6NGA9 273 aa11.65□□□□□ -0.54
TUBB3-204ENST00000554116 C9orf172C9J069 976 aa11.65□□□□□ -0.54
TUBB3-204ENST00000554116 AGRPO00253 132 aa11.65□□□□□ -0.54
TUBB3-204ENST00000554116 NVLO15381 856 aaKnown RBP11.65□□□□□ -0.54
TUBB3-204ENST00000554116 SUV39H1O43463 412 aa11.65□□□□□ -0.54
TUBB3-204ENST00000554116 PIGNO95427 931 aa11.65□□□□□ -0.54
TUBB3-204ENST00000554116 SERPINC1P01008 464 aa11.65□□□□□ -0.54
TUBB3-204ENST00000554116 RPLP0P05388 317 aaKnown RBP11.65□□□□□ -0.54
TUBB3-204ENST00000554116 PLEKP08567 350 aaPredicted RBP11.65□□□□□ -0.54
TUBB3-204ENST00000554116 FAM87AP0C7U9 286 aa11.65□□□□□ -0.54
TUBB3-204ENST00000554116 SFTPCP11686 197 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms