RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 NFKB2Q00653 900 aa7.84□□□□□ -1.15
ABCD4-220ENST00000553998 NRG1Q02297 640 aaPredicted RBP7.84□□□□□ -1.15
ABCD4-220ENST00000553998 KIF5AQ12840 1032 aa7.84□□□□□ -1.15
ABCD4-220ENST00000553998 FGL2Q14314 439 aa7.84□□□□□ -1.15
ABCD4-220ENST00000553998 TBR1Q16650 682 aa7.84□□□□□ -1.15
ABCD4-220ENST00000553998 IFI16Q16666 785 aaKnown RBP7.84□□□□□ -1.15
ABCD4-220ENST00000553998 HADHQ16836 314 aaKnown RBP7.84□□□□□ -1.15
ABCD4-220ENST00000553998 CDO1Q16878 200 aa7.84□□□□□ -1.15
ABCD4-220ENST00000553998 ACCSLQ4AC99 568 aa7.84□□□□□ -1.15
ABCD4-220ENST00000553998 BOLA3Q53S33 107 aa7.84□□□□□ -1.15
ABCD4-220ENST00000553998 ZNF542PQ5EBM4 170 aa7.84□□□□□ -1.15
ABCD4-220ENST00000553998 EFHC2Q5JST6 749 aa7.84□□□□□ -1.15
ABCD4-220ENST00000553998 C6orf132Q5T0Z8 1188 aa7.84□□□□□ -1.15
ABCD4-220ENST00000553998 ZNF662Q6ZS27 426 aa7.84□□□□□ -1.15
ABCD4-220ENST00000553998 Q6ZVU0 165 aa7.84□□□□□ -1.15
ABCD4-220ENST00000553998 USP53Q70EK8 1073 aa7.84□□□□□ -1.15
ABCD4-220ENST00000553998 ERN2Q76MJ5 926 aaKnown RBP7.84□□□□□ -1.15
ABCD4-220ENST00000553998 SLFN11Q7Z7L1 901 aa7.84□□□□□ -1.15
ABCD4-220ENST00000553998 C14orf80Q86SX3 495 aa7.84□□□□□ -1.15
ABCD4-220ENST00000553998 KIAA1328Q86T90 577 aa7.84□□□□□ -1.15
ABCD4-220ENST00000553998 CHSY1Q86X52 802 aa7.84□□□□□ -1.15
ABCD4-220ENST00000553998 FAM131BQ86XD5 332 aa7.84□□□□□ -1.15
ABCD4-220ENST00000553998 ACRBPQ8NEB7 543 aa7.84□□□□□ -1.15
ABCD4-220ENST00000553998 OR52K2Q8NGK3 314 aa7.84□□□□□ -1.15
ABCD4-220ENST00000553998 UBE2Q2Q8WVN8 375 aa7.84□□□□□ -1.15
ABCD4-220ENST00000553998 BTN2A2Q8WVV5 523 aa7.84□□□□□ -1.15
ABCD4-220ENST00000553998 KLK6Q92876 244 aa7.84□□□□□ -1.15
ABCD4-220ENST00000553998 EXTL1Q92935 676 aa7.84□□□□□ -1.15
ABCD4-220ENST00000553998 NAT6Q93015 286 aa7.84□□□□□ -1.15
ABCD4-220ENST00000553998 KLF6Q99612 283 aaPredicted RBP7.84□□□□□ -1.15
ABCD4-220ENST00000553998 MYOCQ99972 504 aa7.84□□□□□ -1.15
ABCD4-220ENST00000553998 SLC17A9Q9BYT1 436 aa7.84□□□□□ -1.15
ABCD4-220ENST00000553998 TRIM7Q9C029 511 aa7.84□□□□□ -1.15
ABCD4-220ENST00000553998 TKTL2Q9H0I9 626 aa7.84□□□□□ -1.15
ABCD4-220ENST00000553998 RETREG1Q9H6L5 497 aa7.84□□□□□ -1.15
ABCD4-220ENST00000553998 FZD3Q9NPG1 666 aa7.84□□□□□ -1.15
ABCD4-220ENST00000553998 IGSF5Q9NSI5 407 aa7.84□□□□□ -1.15
ABCD4-220ENST00000553998 GEMIN8Q9NWZ8 242 aaKnown RBP7.84□□□□□ -1.15
ABCD4-220ENST00000553998 SEPT3Q9UH03 358 aa7.84□□□□□ -1.15
ABCD4-220ENST00000553998 SLC25A13Q9UJS0 675 aa7.84□□□□□ -1.15
ABCD4-220ENST00000553998 ADGRG1Q9Y653 693 aa7.84□□□□□ -1.15
ABCD4-220ENST00000553998 AHCTF1Q8WYP5 2266 aa7.83□□□□□ -1.16
ABCD4-220ENST00000553998 COL27A1Q8IZC6 1860 aaPredicted RBP7.83□□□□□ -1.16
ABCD4-220ENST00000553998 LMO7DNF2Z398 122 aa7.83□□□□□ -1.16
ABCD4-220ENST00000553998 RNF103O00237 685 aa7.83□□□□□ -1.16
ABCD4-220ENST00000553998 CASC3O15234 703 aaKnown RBP7.83□□□□□ -1.16
ABCD4-220ENST00000553998 RAD51BO15315 384 aa7.83□□□□□ -1.16
ABCD4-220ENST00000553998 SPINT1O43278 529 aa7.83□□□□□ -1.16
ABCD4-220ENST00000553998 PPFIA2O75334 1257 aa7.83□□□□□ -1.16
ABCD4-220ENST00000553998 PAGE1O75459 146 aa7.83□□□□□ -1.16
ABCD4-220ENST00000553998 CLDN11O75508 207 aa7.83□□□□□ -1.16
ABCD4-220ENST00000553998 PAK4O96013 591 aaPredicted RBP7.83□□□□□ -1.16
ABCD4-220ENST00000553998 MT-CO1P00395 513 aa7.83□□□□□ -1.16
ABCD4-220ENST00000553998 PRNPP04156 253 aa7.83□□□□□ -1.16
ABCD4-220ENST00000553998 CCDC175P0C221 793 aa7.83□□□□□ -1.16
ABCD4-220ENST00000553998 FAM87AP0C7U9 286 aa7.83□□□□□ -1.16
ABCD4-220ENST00000553998 LIPCP11150 499 aa7.83□□□□□ -1.16
ABCD4-220ENST00000553998 JUNDP17535 347 aa7.83□□□□□ -1.16
ABCD4-220ENST00000553998 CR2P20023 1033 aa7.83□□□□□ -1.16
ABCD4-220ENST00000553998 MIPP30301 263 aa7.83□□□□□ -1.16
ABCD4-220ENST00000553998 CCKBRP32239 447 aa7.83□□□□□ -1.16
ABCD4-220ENST00000553998 HTR7P34969 479 aa7.83□□□□□ -1.16
ABCD4-220ENST00000553998 UGT1A5P35504 534 aa7.83□□□□□ -1.16
ABCD4-220ENST00000553998 NOP2P46087 812 aaKnown RBP7.83□□□□□ -1.16
ABCD4-220ENST00000553998 PFN3P60673 137 aa7.83□□□□□ -1.16
ABCD4-220ENST00000553998 RPS21P63220 83 aaKnown RBP7.83□□□□□ -1.16
ABCD4-220ENST00000553998 TLE1Q04724 770 aa7.83□□□□□ -1.16
ABCD4-220ENST00000553998 EIF2B5Q13144 721 aaKnown RBP7.83□□□□□ -1.16
ABCD4-220ENST00000553998 TGIF1Q15583 401 aa7.83□□□□□ -1.16
ABCD4-220ENST00000553998 RABGAP1LQ5R372 815 aa7.83□□□□□ -1.16
ABCD4-220ENST00000553998 TPRG1LQ5T0D9 272 aa7.83□□□□□ -1.16
ABCD4-220ENST00000553998 LRRC38Q5VT99 294 aa7.83□□□□□ -1.16
ABCD4-220ENST00000553998 SEL1L3Q68CR1 1132 aa7.83□□□□□ -1.16
ABCD4-220ENST00000553998 KIAA1161Q6NSJ0 714 aa7.83□□□□□ -1.16
ABCD4-220ENST00000553998 C11orf63Q6NUN7 778 aa7.83□□□□□ -1.16
ABCD4-220ENST00000553998 FBXL22Q6P050 247 aa7.83□□□□□ -1.16
ABCD4-220ENST00000553998 SCYL2Q6P3W7 929 aa7.83□□□□□ -1.16
ABCD4-220ENST00000553998 LRRC31Q6UY01 552 aa7.83□□□□□ -1.16
ABCD4-220ENST00000553998 DTX1Q86Y01 620 aa7.83□□□□□ -1.16
ABCD4-220ENST00000553998 SLC35F3Q8IY50 421 aa7.83□□□□□ -1.16
ABCD4-220ENST00000553998 RNF10Q8N5U6 811 aaKnown RBP7.83□□□□□ -1.16
ABCD4-220ENST00000553998 ARFGAP1Q8N6T3 406 aa7.83□□□□□ -1.16
ABCD4-220ENST00000553998 TEKT4Q8WW24 435 aa7.83□□□□□ -1.16
ABCD4-220ENST00000553998 GLMNQ92990 594 aa7.83□□□□□ -1.16
ABCD4-220ENST00000553998 FEM1CQ96JP0 617 aa7.83□□□□□ -1.16
ABCD4-220ENST00000553998 PSMG3-AS1Q96PY0 264 aa7.83□□□□□ -1.16
ABCD4-220ENST00000553998 IL12RB2Q99665 862 aa7.83□□□□□ -1.16
ABCD4-220ENST00000553998 CCDC3Q9BQI4 270 aa7.83□□□□□ -1.16
ABCD4-220ENST00000553998 ARHGAP9Q9BRR9 750 aa7.83□□□□□ -1.16
ABCD4-220ENST00000553998 DESI2Q9BSY9 194 aa7.83□□□□□ -1.16
ABCD4-220ENST00000553998 C1QTNF2Q9BXJ5 285 aa7.83□□□□□ -1.16
ABCD4-220ENST00000553998 B3GNT4Q9C0J1 378 aa7.83□□□□□ -1.16
ABCD4-220ENST00000553998 LACRTQ9GZZ8 138 aa7.83□□□□□ -1.16
ABCD4-220ENST00000553998 SLC25A18Q9H1K4 315 aa7.83□□□□□ -1.16
ABCD4-220ENST00000553998 PPARGC1AQ9UBK2 798 aaKnown RBP7.83□□□□□ -1.16
ABCD4-220ENST00000553998 SPASTQ9UBP0 616 aa7.83□□□□□ -1.16
ABCD4-220ENST00000553998 FZD10Q9ULW2 581 aa7.83□□□□□ -1.16
ABCD4-220ENST00000553998 FARP1Q9Y4F1 1045 aaPredicted RBP7.83□□□□□ -1.16
ABCD4-220ENST00000553998 FADS3Q9Y5Q0 445 aa7.83□□□□□ -1.16
ABCD4-220ENST00000553998 HS3ST4Q9Y661 456 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 149.2 ms