RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 RANBP9Q96S59 729 aa14.6□□□□□ -0.07
SHMT2-210ENST00000553950 ACOX2Q99424 681 aa14.6□□□□□ -0.07
SHMT2-210ENST00000553950 C19orf43Q9BQ61 176 aa14.6□□□□□ -0.07
SHMT2-210ENST00000553950 MRM3Q9HC36 420 aaKnown RBP14.6□□□□□ -0.07
SHMT2-210ENST00000553950 HCN2Q9UL51 889 aa14.6□□□□□ -0.07
SHMT2-210ENST00000553950 PPM1HQ9ULR3 514 aa14.6□□□□□ -0.07
SHMT2-210ENST00000553950 TTC24A2A3L6 582 aaPredicted RBP14.59□□□□□ -0.07
SHMT2-210ENST00000553950 FAM170BA6NMN3 283 aa14.59□□□□□ -0.07
SHMT2-210ENST00000553950 ANKRD66B4E2M5 251 aa14.59□□□□□ -0.07
SHMT2-210ENST00000553950 USP12O75317 370 aa14.59□□□□□ -0.07
SHMT2-210ENST00000553950 ALDH1A2O94788 518 aa14.59□□□□□ -0.07
SHMT2-210ENST00000553950 TTC4O95801 387 aa14.59□□□□□ -0.07
SHMT2-210ENST00000553950 AGTP01019 485 aa14.59□□□□□ -0.07
SHMT2-210ENST00000553950 DNTTP04053 509 aa14.59□□□□□ -0.07
SHMT2-210ENST00000553950 GSTA2P09210 222 aa14.59□□□□□ -0.07
SHMT2-210ENST00000553950 C7P10643 843 aa14.59□□□□□ -0.07
SHMT2-210ENST00000553950 ZNF30P17039 623 aa14.59□□□□□ -0.07
SHMT2-210ENST00000553950 PAMP19021 973 aa14.59□□□□□ -0.07
SHMT2-210ENST00000553950 CD72P21854 359 aa14.59□□□□□ -0.07
SHMT2-210ENST00000553950 PSMD8P48556 350 aa14.59□□□□□ -0.07
SHMT2-210ENST00000553950 SESN2P58004 480 aaPredicted RBP14.59□□□□□ -0.07
SHMT2-210ENST00000553950 SATB1Q01826 763 aa14.59□□□□□ -0.07
SHMT2-210ENST00000553950 PDIA2Q13087 525 aaKnown RBP14.59□□□□□ -0.07
SHMT2-210ENST00000553950 GALNT3Q14435 633 aa14.59□□□□□ -0.07
SHMT2-210ENST00000553950 SPARCL1Q14515 664 aa14.59□□□□□ -0.07
SHMT2-210ENST00000553950 CST6Q15828 149 aa14.59□□□□□ -0.07
SHMT2-210ENST00000553950 BBS9Q3SYG4 887 aa14.59□□□□□ -0.07
SHMT2-210ENST00000553950 ARSIQ5FYB1 569 aa14.59□□□□□ -0.07
SHMT2-210ENST00000553950 CASC4Q6P4E1 433 aa14.59□□□□□ -0.07
SHMT2-210ENST00000553950 TRMT10CQ7L0Y3 403 aaKnown RBP14.59□□□□□ -0.07
SHMT2-210ENST00000553950 KBTBD6Q86V97 674 aa14.59□□□□□ -0.07
SHMT2-210ENST00000553950 CAND1Q86VP6 1230 aaKnown RBP14.59□□□□□ -0.07
SHMT2-210ENST00000553950 ZNF687Q8N1G0 1237 aa14.59□□□□□ -0.07
SHMT2-210ENST00000553950 SLC25A41Q8N5S1 370 aa14.59□□□□□ -0.07
SHMT2-210ENST00000553950 GABPB2Q8TAK5 448 aaPredicted RBP14.59□□□□□ -0.07
SHMT2-210ENST00000553950 AENQ8WTP8 325 aaKnown RBP14.59□□□□□ -0.07
SHMT2-210ENST00000553950 HNRNPLLQ8WVV9 542 aaKnown RBP14.59□□□□□ -0.07
SHMT2-210ENST00000553950 STAMBPL1Q96FJ0 436 aa14.59□□□□□ -0.07
SHMT2-210ENST00000553950 KLHL32Q96NJ5 620 aa14.59□□□□□ -0.07
SHMT2-210ENST00000553950 MCCC1Q96RQ3 725 aaPredicted RBP14.59□□□□□ -0.07
SHMT2-210ENST00000553950 LYSMD1Q96S90 227 aa14.59□□□□□ -0.07
SHMT2-210ENST00000553950 APOL2Q9BQE5 337 aa14.59□□□□□ -0.07
SHMT2-210ENST00000553950 NEUROG2Q9H2A3 272 aa14.59□□□□□ -0.07
SHMT2-210ENST00000553950 EPC1Q9H2F5 836 aa14.59□□□□□ -0.07
SHMT2-210ENST00000553950 CHRDQ9H2X0 955 aa14.59□□□□□ -0.07
SHMT2-210ENST00000553950 LMAN1LQ9HAT1 526 aa14.59□□□□□ -0.07
SHMT2-210ENST00000553950 MAGEE1Q9HCI5 957 aa14.59□□□□□ -0.07
SHMT2-210ENST00000553950 SAYSD1Q9NPB0 183 aa14.59□□□□□ -0.07
SHMT2-210ENST00000553950 A0A0J9YYE9 177 aa14.58□□□□□ -0.08
SHMT2-210ENST00000553950 C2orf81A6NN90 581 aa14.58□□□□□ -0.08
SHMT2-210ENST00000553950 STK25O00506 426 aa14.58□□□□□ -0.08
SHMT2-210ENST00000553950 SLC7A4O43246 635 aa14.58□□□□□ -0.08
SHMT2-210ENST00000553950 ADAM23O75077 832 aa14.58□□□□□ -0.08
SHMT2-210ENST00000553950 TRBC1P01850 177 aa14.58□□□□□ -0.08
SHMT2-210ENST00000553950 CTSLP07711 333 aa14.58□□□□□ -0.08
SHMT2-210ENST00000553950 PGAM1P18669 254 aa14.58□□□□□ -0.08
SHMT2-210ENST00000553950 ADRA1DP25100 572 aa14.58□□□□□ -0.08
SHMT2-210ENST00000553950 PHBP35232 272 aa14.58□□□□□ -0.08
SHMT2-210ENST00000553950 WASP42768 502 aa14.58□□□□□ -0.08
SHMT2-210ENST00000553950 DHX9Q08211 1270 aaKnown RBP14.58□□□□□ -0.08
SHMT2-210ENST00000553950 TRADDQ15628 312 aa14.58□□□□□ -0.08
SHMT2-210ENST00000553950 CRY1Q16526 586 aa14.58□□□□□ -0.08
SHMT2-210ENST00000553950 QPCTQ16769 361 aa14.58□□□□□ -0.08
SHMT2-210ENST00000553950 PCID2Q5JVF3 399 aa14.58□□□□□ -0.08
SHMT2-210ENST00000553950 DENND5AQ6IQ26 1287 aa14.58□□□□□ -0.08
SHMT2-210ENST00000553950 FBXL19Q6PCT2 694 aa14.58□□□□□ -0.08
SHMT2-210ENST00000553950 KDELC2Q7Z4H8 507 aa14.58□□□□□ -0.08
SHMT2-210ENST00000553950 GLT6D1Q7Z4J2 308 aa14.58□□□□□ -0.08
SHMT2-210ENST00000553950 TMC3Q7Z5M5 1100 aa14.58□□□□□ -0.08
SHMT2-210ENST00000553950 MMAAQ8IVH4 418 aaKnown RBP14.58□□□□□ -0.08
SHMT2-210ENST00000553950 RAVER1Q8IY67 606 aaKnown RBP14.58□□□□□ -0.08
SHMT2-210ENST00000553950 ZBED8Q8IZ13 594 aa14.58□□□□□ -0.08
SHMT2-210ENST00000553950 CNPY4Q8N129 248 aa14.58□□□□□ -0.08
SHMT2-210ENST00000553950 BRSK1Q8TDC3 778 aa14.58□□□□□ -0.08
SHMT2-210ENST00000553950 PYROXD1Q8WU10 500 aa14.58□□□□□ -0.08
SHMT2-210ENST00000553950 PIH1D2Q8WWB5 315 aa14.58□□□□□ -0.08
SHMT2-210ENST00000553950 EDAQ92838 391 aa14.58□□□□□ -0.08
SHMT2-210ENST00000553950 CLDN23Q96B33 292 aa14.58□□□□□ -0.08
SHMT2-210ENST00000553950 FAM129BQ96TA1 746 aa14.58□□□□□ -0.08
SHMT2-210ENST00000553950 HINFPQ9BQA5 517 aa14.58□□□□□ -0.08
SHMT2-210ENST00000553950 HDAC8Q9BY41 377 aa14.58□□□□□ -0.08
SHMT2-210ENST00000553950 RIMKLBQ9ULI2 386 aa14.58□□□□□ -0.08
SHMT2-210ENST00000553950 PPIL1Q9Y3C6 166 aa14.58□□□□□ -0.08
SHMT2-210ENST00000553950 MAD1L1Q9Y6D9 718 aa14.58□□□□□ -0.08
SHMT2-210ENST00000553950 NCOR1O75376 2440 aa14.57□□□□□ -0.08
SHMT2-210ENST00000553950 COL6A3P12111 3177 aa14.57□□□□□ -0.08
SHMT2-210ENST00000553950 PLXND1Q9Y4D7 1925 aa14.57□□□□□ -0.08
SHMT2-210ENST00000553950 A0A1W2PQF6 199 aa14.57□□□□□ -0.08
SHMT2-210ENST00000553950 C16orf96A6NNT2 1141 aa14.57□□□□□ -0.08
SHMT2-210ENST00000553950 PAPSS2O95340 614 aaPredicted RBP14.57□□□□□ -0.08
SHMT2-210ENST00000553950 PRLP01236 227 aa14.57□□□□□ -0.08
SHMT2-210ENST00000553950 ACADMP11310 421 aa14.57□□□□□ -0.08
SHMT2-210ENST00000553950 MGAT1P26572 445 aa14.57□□□□□ -0.08
SHMT2-210ENST00000553950 GKP32189 559 aa14.57□□□□□ -0.08
SHMT2-210ENST00000553950 MAGEA4P43358 317 aa14.57□□□□□ -0.08
SHMT2-210ENST00000553950 CHRNA4P43681 627 aa14.57□□□□□ -0.08
SHMT2-210ENST00000553950 COPAP53621 1224 aa14.57□□□□□ -0.08
SHMT2-210ENST00000553950 SEPT6Q14141 434 aa14.57□□□□□ -0.08
SHMT2-210ENST00000553950 ARHGEF7Q14155 803 aa14.57□□□□□ -0.08
SHMT2-210ENST00000553950 NAA30Q147X3 362 aaPredicted RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms