RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 GOLGA6AQ9NYA3 693 aa13.94□□□□□ -0.18
TUBB3-202ENST00000553656 SUSD2Q9UGT4 822 aa13.94□□□□□ -0.18
TUBB3-202ENST00000553656 FAM153AQ9UHL3 310 aa13.94□□□□□ -0.18
TUBB3-202ENST00000553656 RPL26L1Q9UNX3 145 aaKnown RBP13.94□□□□□ -0.18
TUBB3-202ENST00000553656 CHKBQ9Y259 395 aa13.94□□□□□ -0.18
TUBB3-202ENST00000553656 ITM2BQ9Y287 266 aa13.94□□□□□ -0.18
TUBB3-202ENST00000553656 ATXN2Q99700 1313 aaKnown RBP13.93□□□□□ -0.18
TUBB3-202ENST00000553656 C5orf60A6NFR6 353 aa13.93□□□□□ -0.18
TUBB3-202ENST00000553656 F5H423 210 aaPredicted RBP13.93□□□□□ -0.18
TUBB3-202ENST00000553656 RIOK3O14730 519 aaKnown RBP13.93□□□□□ -0.18
TUBB3-202ENST00000553656 AREL1O15033 823 aa13.93□□□□□ -0.18
TUBB3-202ENST00000553656 ZNF185O15231 689 aa13.93□□□□□ -0.18
TUBB3-202ENST00000553656 PMPCBO75439 489 aa13.93□□□□□ -0.18
TUBB3-202ENST00000553656 IFNB1P01574 187 aa13.93□□□□□ -0.18
TUBB3-202ENST00000553656 PRKCGP05129 697 aa13.93□□□□□ -0.18
TUBB3-202ENST00000553656 ITGAVP06756 1048 aa13.93□□□□□ -0.18
TUBB3-202ENST00000553656 MMP2P08253 660 aa13.93□□□□□ -0.18
TUBB3-202ENST00000553656 CYP2A6P11509 494 aaPredicted RBP13.93□□□□□ -0.18
TUBB3-202ENST00000553656 ITPKAP23677 461 aa13.93□□□□□ -0.18
TUBB3-202ENST00000553656 CD27P26842 260 aa13.93□□□□□ -0.18
TUBB3-202ENST00000553656 CD68P34810 354 aaPredicted RBP13.93□□□□□ -0.18
TUBB3-202ENST00000553656 HOXD12P35452 270 aa13.93□□□□□ -0.18
TUBB3-202ENST00000553656 MPLP40238 635 aa13.93□□□□□ -0.18
TUBB3-202ENST00000553656 GRIA4P48058 902 aa13.93□□□□□ -0.18
TUBB3-202ENST00000553656 GEMP55040 296 aa13.93□□□□□ -0.18
TUBB3-202ENST00000553656 PPP2CBP62714 309 aa13.93□□□□□ -0.18
TUBB3-202ENST00000553656 PPP2CAP67775 309 aa13.93□□□□□ -0.18
TUBB3-202ENST00000553656 SGCGQ13326 291 aa13.93□□□□□ -0.18
TUBB3-202ENST00000553656 SIX1Q15475 284 aaPredicted RBP13.93□□□□□ -0.18
TUBB3-202ENST00000553656 OASLQ15646 514 aaKnown RBP13.93□□□□□ -0.18
TUBB3-202ENST00000553656 P3H1Q32P28 736 aa13.93□□□□□ -0.18
TUBB3-202ENST00000553656 FAM182AQ5T1J6 154 aa13.93□□□□□ -0.18
TUBB3-202ENST00000553656 DRICH1Q6PGQ1 229 aaPredicted RBP13.93□□□□□ -0.18
TUBB3-202ENST00000553656 SYT10Q6XYQ8 523 aa13.93□□□□□ -0.18
TUBB3-202ENST00000553656 GSTA5Q7RTV2 222 aa13.93□□□□□ -0.18
TUBB3-202ENST00000553656 ZSWIM9Q86XI8 627 aa13.93□□□□□ -0.18
TUBB3-202ENST00000553656 SYT12Q8IV01 421 aa13.93□□□□□ -0.18
TUBB3-202ENST00000553656 SPATA22Q8NHS9 363 aa13.93□□□□□ -0.18
TUBB3-202ENST00000553656 SPOCK2Q92563 424 aa13.93□□□□□ -0.18
TUBB3-202ENST00000553656 RUBCNQ92622 972 aa13.93□□□□□ -0.18
TUBB3-202ENST00000553656 C16orf45Q96MC5 204 aaPredicted RBP13.93□□□□□ -0.18
TUBB3-202ENST00000553656 NSMCE3Q96MG7 304 aa13.93□□□□□ -0.18
TUBB3-202ENST00000553656 PHOX2BQ99453 314 aa13.93□□□□□ -0.18
TUBB3-202ENST00000553656 WRAP53Q9BUR4 548 aaKnown RBP13.93□□□□□ -0.18
TUBB3-202ENST00000553656 C1QTNF7Q9BXJ2 289 aa13.93□□□□□ -0.18
TUBB3-202ENST00000553656 FSD1LQ9BXM9 530 aa13.93□□□□□ -0.18
TUBB3-202ENST00000553656 AP1M1Q9BXS5 423 aa13.93□□□□□ -0.18
TUBB3-202ENST00000553656 ARRDC1-AS1Q9H2J1 176 aa13.93□□□□□ -0.18
TUBB3-202ENST00000553656 UBP1Q9NZI7 540 aa13.93□□□□□ -0.18
TUBB3-202ENST00000553656 EIF2B4Q9UI10 523 aaKnown RBP13.93□□□□□ -0.18
TUBB3-202ENST00000553656 DMTF1Q9Y222 760 aa13.93□□□□□ -0.18
TUBB3-202ENST00000553656 AAR2Q9Y312 384 aaKnown RBP13.93□□□□□ -0.18
TUBB3-202ENST00000553656 ANKRD36A6QL64 1941 aa13.93□□□□□ -0.18
TUBB3-202ENST00000553656 SPAG17Q6Q759 2223 aa13.92□□□□□ -0.18
TUBB3-202ENST00000553656 GCATO75600 419 aa13.92□□□□□ -0.18
TUBB3-202ENST00000553656 TM7SF2O76062 418 aa13.92□□□□□ -0.18
TUBB3-202ENST00000553656 MT-CYBP00156 380 aaPredicted RBP13.92□□□□□ -0.18
TUBB3-202ENST00000553656 IGHV4-34P06331 123 aa13.92□□□□□ -0.18
TUBB3-202ENST00000553656 MAOBP27338 520 aa13.92□□□□□ -0.18
TUBB3-202ENST00000553656 MMP12P39900 470 aa13.92□□□□□ -0.18
TUBB3-202ENST00000553656 PAFAH1B1P43034 410 aa13.92□□□□□ -0.18
TUBB3-202ENST00000553656 LMNB2Q03252 620 aa13.92□□□□□ -0.18
TUBB3-202ENST00000553656 MPP3Q13368 585 aa13.92□□□□□ -0.18
TUBB3-202ENST00000553656 ARHGEF7Q14155 803 aa13.92□□□□□ -0.18
TUBB3-202ENST00000553656 TMEM52BQ4KMG9 183 aa13.92□□□□□ -0.18
TUBB3-202ENST00000553656 ABCA7Q8IZY2 2146 aa13.92□□□□□ -0.18
TUBB3-202ENST00000553656 IPMKQ8NFU5 416 aa13.92□□□□□ -0.18
TUBB3-202ENST00000553656 CEP76Q8TAP6 659 aa13.92□□□□□ -0.18
TUBB3-202ENST00000553656 DNASE2BQ8WZ79 361 aa13.92□□□□□ -0.18
TUBB3-202ENST00000553656 MAGOHBQ96A72 148 aaKnown RBP13.92□□□□□ -0.18
TUBB3-202ENST00000553656 RMDN1Q96DB5 314 aa13.92□□□□□ -0.18
TUBB3-202ENST00000553656 FAM122AQ96E09 287 aa13.92□□□□□ -0.18
TUBB3-202ENST00000553656 CAPZA3Q96KX2 299 aa13.92□□□□□ -0.18
TUBB3-202ENST00000553656 GGT7Q9UJ14 662 aa13.92□□□□□ -0.18
TUBB3-202ENST00000553656 PILRBQ9UKJ0 227 aa13.92□□□□□ -0.18
TUBB3-202ENST00000553656 WDFY4Q6ZS81 3184 aa13.91□□□□□ -0.18
TUBB3-202ENST00000553656 NUMA1Q14980 2115 aa13.91□□□□□ -0.18
TUBB3-202ENST00000553656 A0A1W2PPC4 97 aa13.91□□□□□ -0.18
TUBB3-202ENST00000553656 IGLON5A6NGN9 336 aa13.91□□□□□ -0.18
TUBB3-202ENST00000553656 PRR5-ARHGAP8B1AHC4 643 aa13.91□□□□□ -0.18
TUBB3-202ENST00000553656 BCAT2O15382 392 aaPredicted RBP13.91□□□□□ -0.18
TUBB3-202ENST00000553656 SLC31A1O15431 190 aa13.91□□□□□ -0.18
TUBB3-202ENST00000553656 SPINT1O43278 529 aa13.91□□□□□ -0.18
TUBB3-202ENST00000553656 LATO43561 262 aa13.91□□□□□ -0.18
TUBB3-202ENST00000553656 LZTS3O60299 673 aaPredicted RBP13.91□□□□□ -0.18
TUBB3-202ENST00000553656 FZD6O60353 706 aa13.91□□□□□ -0.18
TUBB3-202ENST00000553656 NDST3O95803 873 aa13.91□□□□□ -0.18
TUBB3-202ENST00000553656 PDHA1P08559 390 aa13.91□□□□□ -0.18
TUBB3-202ENST00000553656 ELFN1P0C7U0 828 aa13.91□□□□□ -0.18
TUBB3-202ENST00000553656 CTPS1P17812 591 aa13.91□□□□□ -0.18
TUBB3-202ENST00000553656 ITIH2P19823 946 aa13.91□□□□□ -0.18
TUBB3-202ENST00000553656 PSMB4P28070 264 aa13.91□□□□□ -0.18
TUBB3-202ENST00000553656 AKT2P31751 481 aa13.91□□□□□ -0.18
TUBB3-202ENST00000553656 VIPR1P32241 457 aa13.91□□□□□ -0.18
TUBB3-202ENST00000553656 GDF10P55107 478 aa13.91□□□□□ -0.18
TUBB3-202ENST00000553656 WNT3AP56704 352 aa13.91□□□□□ -0.18
TUBB3-202ENST00000553656 CDK18Q07002 472 aa13.91□□□□□ -0.18
TUBB3-202ENST00000553656 GALNT3Q14435 633 aa13.91□□□□□ -0.18
TUBB3-202ENST00000553656 TEAD4Q15561 434 aa13.91□□□□□ -0.18
TUBB3-202ENST00000553656 PARP6Q2NL67 630 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms