RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 EPHB2P29323 1055 aa5.95□□□□□ -1.46
SCFD1-208ENST00000553278 IDUAP35475 653 aa5.95□□□□□ -1.46
SCFD1-208ENST00000553278 MATR3P43243 847 aaKnown RBP eCLIP5.95□□□□□ -1.46
SCFD1-208ENST00000553278 CCT8P50990 548 aa5.95□□□□□ -1.46
SCFD1-208ENST00000553278 POLGP54098 1239 aaPredicted RBP5.95□□□□□ -1.46
SCFD1-208ENST00000553278 CLDN2P57739 230 aa5.95□□□□□ -1.46
SCFD1-208ENST00000553278 SCN1BQ07699 218 aa5.95□□□□□ -1.46
SCFD1-208ENST00000553278 SLC14A1Q13336 389 aa5.95□□□□□ -1.46
SCFD1-208ENST00000553278 KCNC3Q14003 757 aa5.95□□□□□ -1.46
SCFD1-208ENST00000553278 GALNT3Q14435 633 aa5.95□□□□□ -1.46
SCFD1-208ENST00000553278 KPNB1Q14974 876 aaKnown RBP5.95□□□□□ -1.46
SCFD1-208ENST00000553278 DAB2IPQ5VWQ8 1189 aa5.95□□□□□ -1.46
SCFD1-208ENST00000553278 NAPRTQ6XQN6 538 aa5.95□□□□□ -1.46
SCFD1-208ENST00000553278 ERN2Q76MJ5 926 aaKnown RBP5.95□□□□□ -1.46
SCFD1-208ENST00000553278 MMP21Q8N119 569 aa5.95□□□□□ -1.46
SCFD1-208ENST00000553278 ZCCHC9Q8N567 271 aaKnown RBP5.95□□□□□ -1.46
SCFD1-208ENST00000553278 ZFPM2Q8WW38 1151 aa5.95□□□□□ -1.46
SCFD1-208ENST00000553278 DAZAP1Q96EP5 407 aaKnown RBP5.95□□□□□ -1.46
SCFD1-208ENST00000553278 CCDC114Q96M63 670 aa5.95□□□□□ -1.46
SCFD1-208ENST00000553278 SEPT5Q99719 369 aaPredicted RBP5.95□□□□□ -1.46
SCFD1-208ENST00000553278 SLC25A23Q9BV35 468 aa5.95□□□□□ -1.46
SCFD1-208ENST00000553278 SSBP3Q9BWW4 388 aaPredicted RBP5.95□□□□□ -1.46
SCFD1-208ENST00000553278 FRMD8Q9BZ67 464 aaPredicted RBP5.95□□□□□ -1.46
SCFD1-208ENST00000553278 ST6GALNAC4Q9H4F1 302 aa5.95□□□□□ -1.46
SCFD1-208ENST00000553278 DENND2DQ9H6A0 471 aaPredicted RBP5.95□□□□□ -1.46
SCFD1-208ENST00000553278 BPIFA1Q9NP55 256 aa5.95□□□□□ -1.46
SCFD1-208ENST00000553278 ASIC5Q9NY37 505 aa5.95□□□□□ -1.46
SCFD1-208ENST00000553278 ANKFY1Q9P2R3 1169 aa5.95□□□□□ -1.46
SCFD1-208ENST00000553278 MAFFQ9ULX9 164 aa5.95□□□□□ -1.46
SCFD1-208ENST00000553278 PLAGL1Q9UM63 463 aa5.95□□□□□ -1.46
SCFD1-208ENST00000553278 FZD1Q9UP38 647 aa5.95□□□□□ -1.46
SCFD1-208ENST00000553278 R3HDM2Q9Y2K5 976 aaKnown RBP5.95□□□□□ -1.46
SCFD1-208ENST00000553278 TCAF1Q9Y4C2 921 aa5.95□□□□□ -1.46
SCFD1-208ENST00000553278 MST1RQ04912 1400 aa5.94□□□□□ -1.46
SCFD1-208ENST00000553278 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.94□□□□□ -1.46
SCFD1-208ENST00000553278 A0A0U1RQK1 487 aa5.94□□□□□ -1.46
SCFD1-208ENST00000553278 ZNF320A2RRD8 509 aa5.94□□□□□ -1.46
SCFD1-208ENST00000553278 EBAG9O00559 213 aa5.94□□□□□ -1.46
SCFD1-208ENST00000553278 STX6O43752 255 aa5.94□□□□□ -1.46
SCFD1-208ENST00000553278 SLC25A17O43808 307 aa5.94□□□□□ -1.46
SCFD1-208ENST00000553278 C22orf31O95567 290 aa5.94□□□□□ -1.46
SCFD1-208ENST00000553278 THEGLP0DJG4 465 aa5.94□□□□□ -1.46
SCFD1-208ENST00000553278 CYP2D6P10635 497 aa5.94□□□□□ -1.46
SCFD1-208ENST00000553278 C6P13671 934 aa5.94□□□□□ -1.46
SCFD1-208ENST00000553278 GRIA3P42263 894 aa5.94□□□□□ -1.46
SCFD1-208ENST00000553278 CCR10P46092 362 aa5.94□□□□□ -1.46
SCFD1-208ENST00000553278 CLCN3P51790 818 aa5.94□□□□□ -1.46
SCFD1-208ENST00000553278 WASHC5Q12768 1159 aa5.94□□□□□ -1.46
SCFD1-208ENST00000553278 PRKD1Q15139 912 aaPredicted RBP5.94□□□□□ -1.46
SCFD1-208ENST00000553278 KRT24Q2M2I5 525 aa5.94□□□□□ -1.46
SCFD1-208ENST00000553278 ZNF674Q2M3X9 581 aa5.94□□□□□ -1.46
SCFD1-208ENST00000553278 TCTN1Q2MV58 587 aa5.94□□□□□ -1.46
SCFD1-208ENST00000553278 SOWAHCQ53LP3 525 aaPredicted RBP5.94□□□□□ -1.46
SCFD1-208ENST00000553278 TBC1D9BQ66K14 1250 aa5.94□□□□□ -1.46
SCFD1-208ENST00000553278 Q6ZNX1 250 aa5.94□□□□□ -1.46
SCFD1-208ENST00000553278 RBPMS2Q6ZRY4 209 aaKnown RBP5.94□□□□□ -1.46
SCFD1-208ENST00000553278 PIWIL3Q7Z3Z3 882 aaKnown RBP5.94□□□□□ -1.46
SCFD1-208ENST00000553278 PEG10Q86TG7 708 aaKnown RBP5.94□□□□□ -1.46
SCFD1-208ENST00000553278 GUF1Q8N442 669 aaKnown RBP5.94□□□□□ -1.46
SCFD1-208ENST00000553278 NAT8LQ8N9F0 302 aa5.94□□□□□ -1.46
SCFD1-208ENST00000553278 TC2NQ8N9U0 490 aa5.94□□□□□ -1.46
SCFD1-208ENST00000553278 XXYLT1Q8NBI6 393 aa5.94□□□□□ -1.46
SCFD1-208ENST00000553278 SPC24Q8NBT2 197 aa5.94□□□□□ -1.46
SCFD1-208ENST00000553278 HJURPQ8NCD3 748 aaPredicted RBP5.94□□□□□ -1.46
SCFD1-208ENST00000553278 MOSPD2Q8NHP6 518 aa5.94□□□□□ -1.46
SCFD1-208ENST00000553278 GRK7Q8WTQ7 553 aa5.94□□□□□ -1.46
SCFD1-208ENST00000553278 PTPMT1Q8WUK0 201 aaPredicted RBP5.94□□□□□ -1.46
SCFD1-208ENST00000553278 KAT2BQ92831 832 aa5.94□□□□□ -1.46
SCFD1-208ENST00000553278 HDAC11Q96DB2 347 aa5.94□□□□□ -1.46
SCFD1-208ENST00000553278 P2RY11Q96G91 374 aa5.94□□□□□ -1.46
SCFD1-208ENST00000553278 ZC3HAV1LQ96H79 300 aaKnown RBP5.94□□□□□ -1.46
SCFD1-208ENST00000553278 HIPK3Q9H422 1215 aa5.94□□□□□ -1.46
SCFD1-208ENST00000553278 MBNL1Q9NR56 388 aaKnown RBP5.94□□□□□ -1.46
SCFD1-208ENST00000553278 GDE1Q9NZC3 331 aa5.94□□□□□ -1.46
SCFD1-208ENST00000553278 GPR75-ASB3A0A0A6YYF3 556 aa5.93□□□□□ -1.46
SCFD1-208ENST00000553278 CXorf65A6NEN9 183 aa5.93□□□□□ -1.46
SCFD1-208ENST00000553278 LINC00473A8K010 186 aa5.93□□□□□ -1.46
SCFD1-208ENST00000553278 H0YAE9 185 aa5.93□□□□□ -1.46
SCFD1-208ENST00000553278 PRPF4O43172 522 aaKnown RBP eCLIP5.93□□□□□ -1.46
SCFD1-208ENST00000553278 SYNCRIPO60506 623 aaKnown RBP5.93□□□□□ -1.46
SCFD1-208ENST00000553278 FMO6PO60774 539 aa5.93□□□□□ -1.46
SCFD1-208ENST00000553278 ZC3H11AO75152 810 aaKnown RBP eCLIP5.93□□□□□ -1.46
SCFD1-208ENST00000553278 TADA2AO75478 443 aa5.93□□□□□ -1.46
SCFD1-208ENST00000553278 NFATC1O95644 943 aa5.93□□□□□ -1.46
SCFD1-208ENST00000553278 MMP9P14780 707 aa5.93□□□□□ -1.46
SCFD1-208ENST00000553278 KLRC2P26717 231 aa5.93□□□□□ -1.46
SCFD1-208ENST00000553278 HOXC8P31273 242 aa5.93□□□□□ -1.46
SCFD1-208ENST00000553278 MC5RP33032 325 aa5.93□□□□□ -1.46
SCFD1-208ENST00000553278 CENPAP49450 140 aa5.93□□□□□ -1.46
SCFD1-208ENST00000553278 NPY4RP50391 375 aa5.93□□□□□ -1.46
SCFD1-208ENST00000553278 RAB28P51157 221 aa5.93□□□□□ -1.46
SCFD1-208ENST00000553278 ALDH3A2P51648 485 aa5.93□□□□□ -1.46
SCFD1-208ENST00000553278 CYP4F2P78329 520 aa5.93□□□□□ -1.46
SCFD1-208ENST00000553278 SLC18A2Q05940 514 aa5.93□□□□□ -1.46
SCFD1-208ENST00000553278 HYAL4Q2M3T9 481 aa5.93□□□□□ -1.46
SCFD1-208ENST00000553278 C6orf141Q5SZD1 244 aa5.93□□□□□ -1.46
SCFD1-208ENST00000553278 SUSD1Q6UWL2 747 aa5.93□□□□□ -1.46
SCFD1-208ENST00000553278 SLC29A4Q7RTT9 530 aa5.93□□□□□ -1.46
SCFD1-208ENST00000553278 ADCK2Q7Z695 626 aa5.93□□□□□ -1.46
SCFD1-208ENST00000553278 LURAP1LQ8IV03 231 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms