RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 SETMARQ53H47 684 aaPredicted RBP14.22□□□□□ -0.13
PTCH1-226ENST00000553011 TEX44Q53QW1 395 aa14.22□□□□□ -0.13
PTCH1-226ENST00000553011 SLC45A4Q5BKX6 768 aa14.22□□□□□ -0.13
PTCH1-226ENST00000553011 KIAA1161Q6NSJ0 714 aa14.22□□□□□ -0.13
PTCH1-226ENST00000553011 SERAC1Q96JX3 654 aa14.22□□□□□ -0.13
PTCH1-226ENST00000553011 WRAP53Q9BUR4 548 aaKnown RBP14.22□□□□□ -0.13
PTCH1-226ENST00000553011 TLR10Q9BXR5 811 aa14.22□□□□□ -0.13
PTCH1-226ENST00000553011 FZD3Q9NPG1 666 aa14.22□□□□□ -0.13
PTCH1-226ENST00000553011 AASDHPPTQ9NRN7 309 aa14.22□□□□□ -0.13
PTCH1-226ENST00000553011 HAUS2Q9NVX0 235 aa14.22□□□□□ -0.13
PTCH1-226ENST00000553011 TPX2Q9ULW0 747 aaKnown RBP14.22□□□□□ -0.13
PTCH1-226ENST00000553011 PYCARDQ9ULZ3 195 aa14.22□□□□□ -0.13
PTCH1-226ENST00000553011 R3HDM2Q9Y2K5 976 aaKnown RBP14.22□□□□□ -0.13
PTCH1-226ENST00000553011 PCDHB9Q9Y5E1 797 aa14.22□□□□□ -0.13
PTCH1-226ENST00000553011 RAI2Q9Y5P3 530 aa14.22□□□□□ -0.13
PTCH1-226ENST00000553011 PRR5-ARHGAP8B1AHC4 643 aa14.21□□□□□ -0.13
PTCH1-226ENST00000553011 KCNK3O14649 394 aa14.21□□□□□ -0.13
PTCH1-226ENST00000553011 MMP20O60882 483 aa14.21□□□□□ -0.13
PTCH1-226ENST00000553011 PGLSO95336 258 aa14.21□□□□□ -0.13
PTCH1-226ENST00000553011 CPP00450 1065 aa14.21□□□□□ -0.13
PTCH1-226ENST00000553011 WNT1P04628 370 aa14.21□□□□□ -0.13
PTCH1-226ENST00000553011 MMP2P08253 660 aa14.21□□□□□ -0.13
PTCH1-226ENST00000553011 PDHA1P08559 390 aa14.21□□□□□ -0.13
PTCH1-226ENST00000553011 CES1P23141 567 aa14.21□□□□□ -0.13
PTCH1-226ENST00000553011 RBL1P28749 1068 aa14.21□□□□□ -0.13
PTCH1-226ENST00000553011 MMP12P39900 470 aa14.21□□□□□ -0.13
PTCH1-226ENST00000553011 CD86P42081 329 aa14.21□□□□□ -0.13
PTCH1-226ENST00000553011 SUOXP51687 545 aa14.21□□□□□ -0.13
PTCH1-226ENST00000553011 AFF3P51826 1226 aaKnown RBP14.21□□□□□ -0.13
PTCH1-226ENST00000553011 EIF3EP60228 445 aaKnown RBP14.21□□□□□ -0.13
PTCH1-226ENST00000553011 RACK1P63244 317 aaKnown RBP14.21□□□□□ -0.13
PTCH1-226ENST00000553011 FAM193AP78312 1265 aa14.21□□□□□ -0.13
PTCH1-226ENST00000553011 SKOR1P84550 965 aa14.21□□□□□ -0.13
PTCH1-226ENST00000553011 LMNB2Q03252 620 aa14.21□□□□□ -0.13
PTCH1-226ENST00000553011 ELP6Q0PNE2 266 aa14.21□□□□□ -0.13
PTCH1-226ENST00000553011 KLF1Q13351 362 aaPredicted RBP14.21□□□□□ -0.13
PTCH1-226ENST00000553011 XRCC4Q13426 336 aa14.21□□□□□ -0.13
PTCH1-226ENST00000553011 TMEM52BQ4KMG9 183 aa14.21□□□□□ -0.13
PTCH1-226ENST00000553011 SEL1L2Q5TEA6 688 aa14.21□□□□□ -0.13
PTCH1-226ENST00000553011 NAPEPLDQ6IQ20 393 aa14.21□□□□□ -0.13
PTCH1-226ENST00000553011 OR2I1PQ8NGU4 316 aa14.21□□□□□ -0.13
PTCH1-226ENST00000553011 CXorf40AQ8TE69 158 aa14.21□□□□□ -0.13
PTCH1-226ENST00000553011 UBE2Q2Q8WVN8 375 aa14.21□□□□□ -0.13
PTCH1-226ENST00000553011 HTR3CQ8WXA8 447 aa14.21□□□□□ -0.13
PTCH1-226ENST00000553011 EDEM2Q9BV94 578 aa14.21□□□□□ -0.13
PTCH1-226ENST00000553011 C1QTNF2Q9BXJ5 285 aa14.21□□□□□ -0.13
PTCH1-226ENST00000553011 SLC17A9Q9BYT1 436 aa14.21□□□□□ -0.13
PTCH1-226ENST00000553011 DMTF1Q9Y222 760 aa14.21□□□□□ -0.13
PTCH1-226ENST00000553011 CHKBQ9Y259 395 aa14.21□□□□□ -0.13
PTCH1-226ENST00000553011 PCNX2A6NKB5 2137 aa14.21□□□□□ -0.13
PTCH1-226ENST00000553011 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.2□□□□□ -0.14
PTCH1-226ENST00000553011 A0A1W2PR77 199 aa14.2□□□□□ -0.14
PTCH1-226ENST00000553011 GOLGA6L9A6NEM1 432 aa14.2□□□□□ -0.14
PTCH1-226ENST00000553011 USP27XA6NNY8 438 aa14.2□□□□□ -0.14
PTCH1-226ENST00000553011 A8MX80 341 aa14.2□□□□□ -0.14
PTCH1-226ENST00000553011 ARHGAP33O14559 1287 aa14.2□□□□□ -0.14
PTCH1-226ENST00000553011 RAD51BO15315 384 aa14.2□□□□□ -0.14
PTCH1-226ENST00000553011 MTSS1O43312 755 aa14.2□□□□□ -0.14
PTCH1-226ENST00000553011 FZD6O60353 706 aa14.2□□□□□ -0.14
PTCH1-226ENST00000553011 FOXD2O60548 495 aaPredicted RBP14.2□□□□□ -0.14
PTCH1-226ENST00000553011 PAK4O96013 591 aaPredicted RBP14.2□□□□□ -0.14
PTCH1-226ENST00000553011 RBP3P10745 1247 aa14.2□□□□□ -0.14
PTCH1-226ENST00000553011 CD68P34810 354 aaPredicted RBP14.2□□□□□ -0.14
PTCH1-226ENST00000553011 NUDT1P36639 197 aa14.2□□□□□ -0.14
PTCH1-226ENST00000553011 GRIA4P48058 902 aa14.2□□□□□ -0.14
PTCH1-226ENST00000553011 POLR2LP62875 67 aaKnown RBP14.2□□□□□ -0.14
PTCH1-226ENST00000553011 RALGDSQ12967 914 aa14.2□□□□□ -0.14
PTCH1-226ENST00000553011 GRIK2Q13002 908 aa14.2□□□□□ -0.14
PTCH1-226ENST00000553011 PTPRRQ15256 657 aa14.2□□□□□ -0.14
PTCH1-226ENST00000553011 ARMC12Q5T9G4 340 aa14.2□□□□□ -0.14
PTCH1-226ENST00000553011 ERAP2Q6P179 960 aa14.2□□□□□ -0.14
PTCH1-226ENST00000553011 CDKL3Q8IVW4 592 aaPredicted RBP14.2□□□□□ -0.14
PTCH1-226ENST00000553011 PIH1D2Q8WWB5 315 aa14.2□□□□□ -0.14
PTCH1-226ENST00000553011 SPOCK2Q92563 424 aa14.2□□□□□ -0.14
PTCH1-226ENST00000553011 IMP4Q96G21 291 aaKnown RBP14.2□□□□□ -0.14
PTCH1-226ENST00000553011 TEKT5Q96M29 485 aa14.2□□□□□ -0.14
PTCH1-226ENST00000553011 SMIM14Q96QK8 99 aa14.2□□□□□ -0.14
PTCH1-226ENST00000553011 RBM15Q96T37 977 aaKnown RBP eCLIP14.2□□□□□ -0.14
PTCH1-226ENST00000553011 GTPBP2Q9BX10 602 aaKnown RBP14.2□□□□□ -0.14
PTCH1-226ENST00000553011 TDRD1Q9BXT4 1180 aaKnown RBP14.2□□□□□ -0.14
PTCH1-226ENST00000553011 CARD9Q9H257 536 aa14.2□□□□□ -0.14
PTCH1-226ENST00000553011 GLOD4Q9HC38 313 aa14.2□□□□□ -0.14
PTCH1-226ENST00000553011 B4GALT6Q9UBX8 382 aa14.2□□□□□ -0.14
PTCH1-226ENST00000553011 COQ6Q9Y2Z9 468 aa14.2□□□□□ -0.14
PTCH1-226ENST00000553011 GOLGA4Q13439 2230 aaKnown RBP14.19□□□□□ -0.14
PTCH1-226ENST00000553011 ARID1BQ8NFD5 2236 aaPredicted RBP14.19□□□□□ -0.14
PTCH1-226ENST00000553011 F5H423 210 aaPredicted RBP14.19□□□□□ -0.14
PTCH1-226ENST00000553011 PRAMEF26H0Y7S4 382 aa14.19□□□□□ -0.14
PTCH1-226ENST00000553011 H0Y8X5 98 aa14.19□□□□□ -0.14
PTCH1-226ENST00000553011 CDX4O14627 284 aaPredicted RBP14.19□□□□□ -0.14
PTCH1-226ENST00000553011 ENC1O14682 589 aa14.19□□□□□ -0.14
PTCH1-226ENST00000553011 PRLP01236 227 aa14.19□□□□□ -0.14
PTCH1-226ENST00000553011 CTPS1P17812 591 aa14.19□□□□□ -0.14
PTCH1-226ENST00000553011 NFKB1P19838 968 aa14.19□□□□□ -0.14
PTCH1-226ENST00000553011 HNRNPA2B1P22626 353 aaKnown RBP14.19□□□□□ -0.14
PTCH1-226ENST00000553011 CD38P28907 300 aa14.19□□□□□ -0.14
PTCH1-226ENST00000553011 LIG3P49916 1009 aa14.19□□□□□ -0.14
PTCH1-226ENST00000553011 CLDN2P57739 230 aa14.19□□□□□ -0.14
PTCH1-226ENST00000553011 SGCGQ13326 291 aa14.19□□□□□ -0.14
PTCH1-226ENST00000553011 TEAD4Q15561 434 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms