RNA–Protein interactions for RNA: ENST00000551634.5

NPAS3-211, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5

Gene NPAS3, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-211ENST00000551634 CDK4P11802 303 aa23.78■■□□□ 1.4
NPAS3-211ENST00000551634 NUP93Q8N1F7 819 aa23.78■■□□□ 1.4
NPAS3-211ENST00000551634 HM13Q8TCT9 377 aa23.78■■□□□ 1.4
NPAS3-211ENST00000551634 GFM2Q969S9 779 aaKnown RBP23.78■■□□□ 1.4
NPAS3-211ENST00000551634 FSD1LQ9BXM9 530 aa23.78■■□□□ 1.4
NPAS3-211ENST00000551634 CSPG5O95196 566 aa23.77■■□□□ 1.4
NPAS3-211ENST00000551634 ACAP2Q15057 778 aa23.77■■□□□ 1.4
NPAS3-211ENST00000551634 CTU1Q7Z7A3 348 aaKnown RBP23.77■■□□□ 1.4
NPAS3-211ENST00000551634 SCML4Q8N228 414 aa23.77■■□□□ 1.4
NPAS3-211ENST00000551634 ANKFN1Q8N957 763 aa23.77■■□□□ 1.4
NPAS3-211ENST00000551634 TMEM79Q9BSE2 394 aa23.77■■□□□ 1.4
NPAS3-211ENST00000551634 RHOBTB2Q9BYZ6 727 aa23.77■■□□□ 1.4
NPAS3-211ENST00000551634 ANKRD60Q9BZ19 345 aa23.77■■□□□ 1.4
NPAS3-211ENST00000551634 SLC38A7Q9NVC3 462 aa23.77■■□□□ 1.4
NPAS3-211ENST00000551634 FGF10O15520 208 aaPredicted RBP23.77■■□□□ 1.4
NPAS3-211ENST00000551634 KCNA5P22460 613 aa23.77■■□□□ 1.4
NPAS3-211ENST00000551634 HOXC13P31276 330 aa23.77■■□□□ 1.4
NPAS3-211ENST00000551634 ADAM17P78536 824 aa23.77■■□□□ 1.4
NPAS3-211ENST00000551634 MTX3Q5HYI7 312 aa23.77■■□□□ 1.4
NPAS3-211ENST00000551634 KRT80Q6KB66 452 aa23.77■■□□□ 1.4
NPAS3-211ENST00000551634 ERI1Q8IV48 349 aaKnown RBP23.77■■□□□ 1.4
NPAS3-211ENST00000551634 ROPN1LQ96C74 230 aa23.77■■□□□ 1.4
NPAS3-211ENST00000551634 ZNF419Q96HQ0 510 aaPredicted RBP23.77■■□□□ 1.4
NPAS3-211ENST00000551634 RANBP9Q96S59 729 aa23.77■■□□□ 1.4
NPAS3-211ENST00000551634 TRIM62Q9BVG3 475 aa23.77■■□□□ 1.4
NPAS3-211ENST00000551634 UPF3AQ9H1J1 476 aaKnown RBP23.77■■□□□ 1.4
NPAS3-211ENST00000551634 CYP4F12Q9HCS2 524 aa23.77■■□□□ 1.4
NPAS3-211ENST00000551634 ARMC1Q9NVT9 282 aa23.77■■□□□ 1.4
NPAS3-211ENST00000551634 GMEB1Q9Y692 573 aa23.77■■□□□ 1.4
NPAS3-211ENST00000551634 PCSK6P29122 969 aa23.76■■□□□ 1.39
NPAS3-211ENST00000551634 RANBP1P43487 201 aa23.76■■□□□ 1.39
NPAS3-211ENST00000551634 LEPRP48357 1165 aaKnown RBP23.76■■□□□ 1.39
NPAS3-211ENST00000551634 CDK9P50750 372 aaKnown RBP23.76■■□□□ 1.39
NPAS3-211ENST00000551634 RALGDSQ12967 914 aa23.76■■□□□ 1.39
NPAS3-211ENST00000551634 TBC1D25Q3MII6 688 aa23.76■■□□□ 1.39
NPAS3-211ENST00000551634 C6orf10Q5SRN2 563 aa23.76■■□□□ 1.39
NPAS3-211ENST00000551634 RBM20Q5T481 1227 aaKnown RBP23.76■■□□□ 1.39
NPAS3-211ENST00000551634 TIGD7Q6NT04 549 aaPredicted RBP23.76■■□□□ 1.39
NPAS3-211ENST00000551634 PPP4R4Q6NUP7 873 aa23.76■■□□□ 1.39
NPAS3-211ENST00000551634 BEND5Q7L4P6 421 aa23.76■■□□□ 1.39
NPAS3-211ENST00000551634 DQX1Q8TE96 717 aaKnown RBP23.76■■□□□ 1.39
NPAS3-211ENST00000551634 CATSPERBQ9H7T0 1116 aa23.76■■□□□ 1.39
NPAS3-211ENST00000551634 TNFRSF12AQ9NP84 129 aa23.76■■□□□ 1.39
NPAS3-211ENST00000551634 OLAHQ9NV23 265 aa23.76■■□□□ 1.39
NPAS3-211ENST00000551634 TBC1D13Q9NVG8 400 aa23.76■■□□□ 1.39
NPAS3-211ENST00000551634 TRAF6Q9Y4K3 522 aa23.76■■□□□ 1.39
NPAS3-211ENST00000551634 DICER1Q9UPY3 1922 aaKnown RBP23.76■■□□□ 1.39
NPAS3-211ENST00000551634 BMP2P12643 396 aa23.76■■□□□ 1.39
NPAS3-211ENST00000551634 CRYBB1P53674 252 aaPredicted RBP23.76■■□□□ 1.39
NPAS3-211ENST00000551634 GALNT7Q86SF2 657 aa23.76■■□□□ 1.39
NPAS3-211ENST00000551634 DPP9Q86TI2 863 aa23.76■■□□□ 1.39
NPAS3-211ENST00000551634 DHFR2Q86XF0 187 aa23.76■■□□□ 1.39
NPAS3-211ENST00000551634 CDCA5Q96FF9 252 aa23.76■■□□□ 1.39
NPAS3-211ENST00000551634 RMND5BQ96G75 393 aaPredicted RBP23.76■■□□□ 1.39
NPAS3-211ENST00000551634 UBXN10Q96LJ8 280 aa23.76■■□□□ 1.39
NPAS3-211ENST00000551634 SLC29A1Q99808 456 aa23.76■■□□□ 1.39
NPAS3-211ENST00000551634 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.76■■□□□ 1.39
NPAS3-211ENST00000551634 HNRNPRO43390 633 aaKnown RBP23.75■■□□□ 1.39
NPAS3-211ENST00000551634 PPP1R3AQ16821 1122 aa23.75■■□□□ 1.39
NPAS3-211ENST00000551634 LARP4Q71RC2 724 aaKnown RBP eCLIP23.75■■□□□ 1.39
NPAS3-211ENST00000551634 MRGPRX2Q96LB1 330 aa23.75■■□□□ 1.39
NPAS3-211ENST00000551634 OLFM1Q99784 485 aa23.75■■□□□ 1.39
NPAS3-211ENST00000551634 PREBQ9HCU5 417 aa23.75■■□□□ 1.39
NPAS3-211ENST00000551634 CNOT6Q9ULM6 557 aaKnown RBP23.75■■□□□ 1.39
NPAS3-211ENST00000551634 MTF2Q9Y483 593 aaPredicted RBP23.75■■□□□ 1.39
NPAS3-211ENST00000551634 MYLKQ15746 1914 aa23.75■■□□□ 1.39
NPAS3-211ENST00000551634 HTRA2O43464 458 aaPredicted RBP23.75■■□□□ 1.39
NPAS3-211ENST00000551634 PMPCBO75439 489 aa23.75■■□□□ 1.39
NPAS3-211ENST00000551634 IGLV3-25P01717 112 aa23.75■■□□□ 1.39
NPAS3-211ENST00000551634 IMPDH1P20839 514 aa23.75■■□□□ 1.39
NPAS3-211ENST00000551634 EIF4EBP2Q13542 120 aaPredicted RBP23.75■■□□□ 1.39
NPAS3-211ENST00000551634 DCTN2Q13561 401 aaKnown RBP23.75■■□□□ 1.39
NPAS3-211ENST00000551634 BRMS1LQ5PSV4 323 aa23.75■■□□□ 1.39
NPAS3-211ENST00000551634 HMBOX1Q6NT76 420 aa23.75■■□□□ 1.39
NPAS3-211ENST00000551634 ZBTB49Q6ZSB9 765 aa23.75■■□□□ 1.39
NPAS3-211ENST00000551634 PCYOX1LQ8NBM8 494 aa23.75■■□□□ 1.39
NPAS3-211ENST00000551634 ARNT2Q9HBZ2 717 aa23.75■■□□□ 1.39
NPAS3-211ENST00000551634 GALNT8Q9NY28 637 aa23.75■■□□□ 1.39
NPAS3-211ENST00000551634 BBIP1A8MTZ0 92 aa23.75■■□□□ 1.39
NPAS3-211ENST00000551634 CCDC166P0CW27 439 aa23.75■■□□□ 1.39
NPAS3-211ENST00000551634 HDCP19113 662 aa23.75■■□□□ 1.39
NPAS3-211ENST00000551634 IGFBP6P24592 240 aaPredicted RBP23.75■■□□□ 1.39
NPAS3-211ENST00000551634 SLC26A3P40879 764 aa23.75■■□□□ 1.39
NPAS3-211ENST00000551634 TWF2Q6IBS0 349 aaKnown RBP23.75■■□□□ 1.39
NPAS3-211ENST00000551634 PTAR1Q7Z6K3 402 aaPredicted RBP23.75■■□□□ 1.39
NPAS3-211ENST00000551634 LRRC49Q8IUZ0 686 aa23.75■■□□□ 1.39
NPAS3-211ENST00000551634 PACRGLQ8N7B6 248 aa23.75■■□□□ 1.39
NPAS3-211ENST00000551634 OR2T34Q8NGX1 318 aa23.75■■□□□ 1.39
NPAS3-211ENST00000551634 OR2T3Q8NH03 318 aa23.75■■□□□ 1.39
NPAS3-211ENST00000551634 GAB3Q8WWW8 586 aa23.75■■□□□ 1.39
NPAS3-211ENST00000551634 ZUFSPQ96AP4 578 aa23.75■■□□□ 1.39
NPAS3-211ENST00000551634 ZFP42Q96MM3 310 aa23.75■■□□□ 1.39
NPAS3-211ENST00000551634 SLC39A8Q9C0K1 460 aa23.75■■□□□ 1.39
NPAS3-211ENST00000551634 GSTO2Q9H4Y5 243 aa23.75■■□□□ 1.39
NPAS3-211ENST00000551634 RBM22Q9NW64 420 aaKnown RBP eCLIP23.75■■□□□ 1.39
NPAS3-211ENST00000551634 SLC8A2Q9UPR5 921 aa23.75■■□□□ 1.39
NPAS3-211ENST00000551634 AURKAO14965 403 aa23.74■■□□□ 1.39
NPAS3-211ENST00000551634 DDNO94850 711 aaPredicted RBP23.74■■□□□ 1.39
NPAS3-211ENST00000551634 HLA-DQB2P05538 268 aa23.74■■□□□ 1.39
NPAS3-211ENST00000551634 PCSK1P29120 753 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms