RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 ARRDC2Q8TBH0 407 aa13.84□□□□□ -0.19
TROAP-213ENST00000550709 ECHDC3Q96DC8 303 aa13.84□□□□□ -0.19
TROAP-213ENST00000550709 QKIQ96PU8 341 aaKnown RBP eCLIP13.84□□□□□ -0.19
TROAP-213ENST00000550709 SLC17A9Q9BYT1 436 aa13.84□□□□□ -0.19
TROAP-213ENST00000550709 TMEM9BQ9NQ34 198 aa13.84□□□□□ -0.19
TROAP-213ENST00000550709 AMACRQ9UHK6 382 aa13.84□□□□□ -0.19
TROAP-213ENST00000550709 CDV3Q9UKY7 258 aaKnown RBP13.84□□□□□ -0.19
TROAP-213ENST00000550709 DMTF1Q9Y222 760 aa13.84□□□□□ -0.19
TROAP-213ENST00000550709 EFR3BQ9Y2G0 817 aa13.84□□□□□ -0.19
TROAP-213ENST00000550709 ANKRD6Q9Y2G4 727 aa13.84□□□□□ -0.19
TROAP-213ENST00000550709 ZNF292O60281 2723 aa13.84□□□□□ -0.19
TROAP-213ENST00000550709 NYNRINQ9P2P1 1898 aaKnown RBP13.83□□□□□ -0.2
TROAP-213ENST00000550709 TCRBV7S2A1N4TA0A589 114 aa13.83□□□□□ -0.2
TROAP-213ENST00000550709 PRAMEF26H0Y7S4 382 aa13.83□□□□□ -0.2
TROAP-213ENST00000550709 CDX4O14627 284 aaPredicted RBP13.83□□□□□ -0.2
TROAP-213ENST00000550709 RIOK3O14730 519 aaKnown RBP13.83□□□□□ -0.2
TROAP-213ENST00000550709 RAD51BO15315 384 aa13.83□□□□□ -0.2
TROAP-213ENST00000550709 SOCS5O75159 536 aa13.83□□□□□ -0.2
TROAP-213ENST00000550709 PGLSO95336 258 aa13.83□□□□□ -0.2
TROAP-213ENST00000550709 CTPS1P17812 591 aa13.83□□□□□ -0.2
TROAP-213ENST00000550709 CES1P23141 567 aa13.83□□□□□ -0.2
TROAP-213ENST00000550709 PTPN3P26045 913 aa13.83□□□□□ -0.2
TROAP-213ENST00000550709 CD38P28907 300 aa13.83□□□□□ -0.2
TROAP-213ENST00000550709 NUDT1P36639 197 aa13.83□□□□□ -0.2
TROAP-213ENST00000550709 GRIA4P48058 902 aa13.83□□□□□ -0.2
TROAP-213ENST00000550709 SUOXP51687 545 aa13.83□□□□□ -0.2
TROAP-213ENST00000550709 EIF3EP60228 445 aaKnown RBP13.83□□□□□ -0.2
TROAP-213ENST00000550709 POLR2LP62875 67 aaKnown RBP13.83□□□□□ -0.2
TROAP-213ENST00000550709 ELP6Q0PNE2 266 aa13.83□□□□□ -0.2
TROAP-213ENST00000550709 NOMO1Q15155 1222 aa13.83□□□□□ -0.2
TROAP-213ENST00000550709 PTPRRQ15256 657 aa13.83□□□□□ -0.2
TROAP-213ENST00000550709 TMEM52BQ4KMG9 183 aa13.83□□□□□ -0.2
TROAP-213ENST00000550709 TEX44Q53QW1 395 aa13.83□□□□□ -0.2
TROAP-213ENST00000550709 SLC45A4Q5BKX6 768 aa13.83□□□□□ -0.2
TROAP-213ENST00000550709 PRAMEF14Q5SWL7 426 aa13.83□□□□□ -0.2
TROAP-213ENST00000550709 ARMC12Q5T9G4 340 aa13.83□□□□□ -0.2
TROAP-213ENST00000550709 MEI1Q5TIA1 1274 aa13.83□□□□□ -0.2
TROAP-213ENST00000550709 KDELC2Q7Z4H8 507 aa13.83□□□□□ -0.2
TROAP-213ENST00000550709 MINDY1Q8N5J2 469 aa13.83□□□□□ -0.2
TROAP-213ENST00000550709 TRIM58Q8NG06 486 aa13.83□□□□□ -0.2
TROAP-213ENST00000550709 NETO1Q8TDF5 533 aa13.83□□□□□ -0.2
TROAP-213ENST00000550709 RBM15Q96T37 977 aaKnown RBP eCLIP13.83□□□□□ -0.2
TROAP-213ENST00000550709 C1QTNF2Q9BXJ5 285 aa13.83□□□□□ -0.2
TROAP-213ENST00000550709 CHKBQ9Y259 395 aa13.83□□□□□ -0.2
TROAP-213ENST00000550709 COQ6Q9Y2Z9 468 aa13.83□□□□□ -0.2
TROAP-213ENST00000550709 SNX11Q9Y5W9 270 aa13.83□□□□□ -0.2
TROAP-213ENST00000550709 LAMA1P25391 3075 aa13.83□□□□□ -0.2
TROAP-213ENST00000550709 A0A1W2PR77 199 aa13.82□□□□□ -0.2
TROAP-213ENST00000550709 GOLGA6L9A6NEM1 432 aa13.82□□□□□ -0.2
TROAP-213ENST00000550709 HACD1B0YJ81 288 aa13.82□□□□□ -0.2
TROAP-213ENST00000550709 H0Y8X5 98 aa13.82□□□□□ -0.2
TROAP-213ENST00000550709 VILLO15195 856 aa13.82□□□□□ -0.2
TROAP-213ENST00000550709 LZTS3O60299 673 aaPredicted RBP13.82□□□□□ -0.2
TROAP-213ENST00000550709 MMP2P08253 660 aa13.82□□□□□ -0.2
TROAP-213ENST00000550709 PDHA1P08559 390 aa13.82□□□□□ -0.2
TROAP-213ENST00000550709 HNRNPA2B1P22626 353 aaKnown RBP13.82□□□□□ -0.2
TROAP-213ENST00000550709 RBL1P28749 1068 aa13.82□□□□□ -0.2
TROAP-213ENST00000550709 MMP12P39900 470 aa13.82□□□□□ -0.2
TROAP-213ENST00000550709 LIG3P49916 1009 aa13.82□□□□□ -0.2
TROAP-213ENST00000550709 EPHB1P54762 984 aa13.82□□□□□ -0.2
TROAP-213ENST00000550709 WASHC5Q12768 1159 aa13.82□□□□□ -0.2
TROAP-213ENST00000550709 HLA-BQ31612 363 aa13.82□□□□□ -0.2
TROAP-213ENST00000550709 SEL1L2Q5TEA6 688 aa13.82□□□□□ -0.2
TROAP-213ENST00000550709 ALG1LQ6GMV1 187 aa13.82□□□□□ -0.2
TROAP-213ENST00000550709 DARS2Q6PI48 645 aaKnown RBP13.82□□□□□ -0.2
TROAP-213ENST00000550709 KDM7AQ6ZMT4 941 aa13.82□□□□□ -0.2
TROAP-213ENST00000550709 REXO1L1PQ8IX06 675 aa13.82□□□□□ -0.2
TROAP-213ENST00000550709 HTR3CQ8WXA8 447 aa13.82□□□□□ -0.2
TROAP-213ENST00000550709 SKA1Q96BD8 255 aa13.82□□□□□ -0.2
TROAP-213ENST00000550709 RMDN1Q96DB5 314 aa13.82□□□□□ -0.2
TROAP-213ENST00000550709 SMIM14Q96QK8 99 aa13.82□□□□□ -0.2
TROAP-213ENST00000550709 GAREM1Q9H706 876 aa13.82□□□□□ -0.2
TROAP-213ENST00000550709 IL21RQ9HBE5 538 aa13.82□□□□□ -0.2
TROAP-213ENST00000550709 GLOD4Q9HC38 313 aa13.82□□□□□ -0.2
TROAP-213ENST00000550709 KLHL8Q9P2G9 620 aaPredicted RBP13.82□□□□□ -0.2
TROAP-213ENST00000550709 B4GALT6Q9UBX8 382 aa13.82□□□□□ -0.2
TROAP-213ENST00000550709 PLXND1Q9Y4D7 1925 aa13.82□□□□□ -0.2
TROAP-213ENST00000550709 KNL1Q8NG31 2342 aa13.81□□□□□ -0.2
TROAP-213ENST00000550709 A0A0U1RQS6 177 aa13.81□□□□□ -0.2
TROAP-213ENST00000550709 A0A1W2PQ67 120 aa13.81□□□□□ -0.2
TROAP-213ENST00000550709 TLR4O00206 839 aa13.81□□□□□ -0.2
TROAP-213ENST00000550709 ZSCAN12O43309 604 aa13.81□□□□□ -0.2
TROAP-213ENST00000550709 MTSS1O43312 755 aa13.81□□□□□ -0.2
TROAP-213ENST00000550709 TM7SF2O76062 418 aa13.81□□□□□ -0.2
TROAP-213ENST00000550709 RBP3P10745 1247 aa13.81□□□□□ -0.2
TROAP-213ENST00000550709 C6P13671 934 aa13.81□□□□□ -0.2
TROAP-213ENST00000550709 SKOR1P84550 965 aa13.81□□□□□ -0.2
TROAP-213ENST00000550709 XRCC4Q13426 336 aa13.81□□□□□ -0.2
TROAP-213ENST00000550709 PCSK7Q16549 785 aa13.81□□□□□ -0.2
TROAP-213ENST00000550709 DENND2CQ68D51 928 aa13.81□□□□□ -0.2
TROAP-213ENST00000550709 PID1Q7Z2X4 250 aa13.81□□□□□ -0.2
TROAP-213ENST00000550709 PTAR1Q7Z6K3 402 aaPredicted RBP13.81□□□□□ -0.2
TROAP-213ENST00000550709 CDKL3Q8IVW4 592 aaPredicted RBP13.81□□□□□ -0.2
TROAP-213ENST00000550709 ZNF567Q8N184 647 aa13.81□□□□□ -0.2
TROAP-213ENST00000550709 TMEM145Q8NBT3 493 aa13.81□□□□□ -0.2
TROAP-213ENST00000550709 LPCAT1Q8NF37 534 aa13.81□□□□□ -0.2
TROAP-213ENST00000550709 SPATA22Q8NHS9 363 aa13.81□□□□□ -0.2
TROAP-213ENST00000550709 PIH1D2Q8WWB5 315 aa13.81□□□□□ -0.2
TROAP-213ENST00000550709 TEKT5Q96M29 485 aa13.81□□□□□ -0.2
TROAP-213ENST00000550709 TDRD1Q9BXT4 1180 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms