RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 ATG7O95352 703 aa12.27□□□□□ -0.45
NR4A1-215ENST00000550557 HNRNPA1P09651 372 aaKnown RBP eCLIP12.27□□□□□ -0.45
NR4A1-215ENST00000550557 ACADSP16219 412 aa12.27□□□□□ -0.45
NR4A1-215ENST00000550557 PECAM1P16284 738 aaPredicted RBP12.27□□□□□ -0.45
NR4A1-215ENST00000550557 IL10P22301 178 aa12.27□□□□□ -0.45
NR4A1-215ENST00000550557 PLIN5Q00G26 463 aa12.27□□□□□ -0.45
NR4A1-215ENST00000550557 ABRQ12979 859 aa12.27□□□□□ -0.45
NR4A1-215ENST00000550557 DLG2Q15700 870 aa12.27□□□□□ -0.45
NR4A1-215ENST00000550557 ANO7Q6IWH7 933 aa12.27□□□□□ -0.45
NR4A1-215ENST00000550557 GPSM1Q86YR5 675 aa12.27□□□□□ -0.45
NR4A1-215ENST00000550557 ZCCHC9Q8N567 271 aaKnown RBP12.27□□□□□ -0.45
NR4A1-215ENST00000550557 USP6NLQ92738 828 aa12.27□□□□□ -0.45
NR4A1-215ENST00000550557 DCLRE1BQ9H816 532 aa12.27□□□□□ -0.45
NR4A1-215ENST00000550557 RMND5AQ9H871 391 aa12.27□□□□□ -0.45
NR4A1-215ENST00000550557 TBX18O95935 607 aa12.26□□□□□ -0.45
NR4A1-215ENST00000550557 BBS12Q6ZW61 710 aa12.26□□□□□ -0.45
NR4A1-215ENST00000550557 ARMCX6Q7L4S7 300 aa12.26□□□□□ -0.45
NR4A1-215ENST00000550557 KRT78Q8N1N4 520 aa12.26□□□□□ -0.45
NR4A1-215ENST00000550557 QRFPRQ96P65 431 aa12.26□□□□□ -0.45
NR4A1-215ENST00000550557 THTPAQ9BU02 230 aa12.26□□□□□ -0.45
NR4A1-215ENST00000550557 THUMPD3Q9BV44 507 aaKnown RBP12.26□□□□□ -0.45
NR4A1-215ENST00000550557 PSME2Q9UL46 239 aa12.26□□□□□ -0.45
NR4A1-215ENST00000550557 ARAP2Q8WZ64 1704 aa12.26□□□□□ -0.45
NR4A1-215ENST00000550557 HOXB2P14652 356 aa12.26□□□□□ -0.45
NR4A1-215ENST00000550557 ADRA1DP25100 572 aa12.26□□□□□ -0.45
NR4A1-215ENST00000550557 STXBP5Q5T5C0 1151 aa12.26□□□□□ -0.45
NR4A1-215ENST00000550557 ADGRF1Q5T601 910 aa12.26□□□□□ -0.45
NR4A1-215ENST00000550557 CIR1Q86X95 450 aaPredicted RBP12.26□□□□□ -0.45
NR4A1-215ENST00000550557 CMTM5Q96DZ9 223 aa12.26□□□□□ -0.45
NR4A1-215ENST00000550557 PLEKHA8Q96JA3 519 aa12.26□□□□□ -0.45
NR4A1-215ENST00000550557 DNAJC1Q96KC8 554 aaKnown RBP12.26□□□□□ -0.45
NR4A1-215ENST00000550557 KCTD5Q9NXV2 234 aa12.26□□□□□ -0.45
NR4A1-215ENST00000550557 RPS6KB2Q9UBS0 482 aa12.26□□□□□ -0.45
NR4A1-215ENST00000550557 SH3BGRLO75368 114 aa12.26□□□□□ -0.45
NR4A1-215ENST00000550557 KLHL2O95198 593 aa12.26□□□□□ -0.45
NR4A1-215ENST00000550557 FAM163BP0C2L3 166 aa12.26□□□□□ -0.45
NR4A1-215ENST00000550557 ADSSP30520 456 aa12.26□□□□□ -0.45
NR4A1-215ENST00000550557 SOX11P35716 441 aa12.26□□□□□ -0.45
NR4A1-215ENST00000550557 AP1S1P61966 158 aa12.26□□□□□ -0.45
NR4A1-215ENST00000550557 MILR1Q7Z6M3 343 aa12.26□□□□□ -0.45
NR4A1-215ENST00000550557 NKAPQ8N5F7 415 aaKnown RBP12.26□□□□□ -0.45
NR4A1-215ENST00000550557 KXD1Q9BQD3 176 aa12.26□□□□□ -0.45
NR4A1-215ENST00000550557 RHOBTB2Q9BYZ6 727 aa12.26□□□□□ -0.45
NR4A1-215ENST00000550557 FAM83DQ9H4H8 585 aa12.26□□□□□ -0.45
NR4A1-215ENST00000550557 TEKT2Q9UIF3 430 aa12.26□□□□□ -0.45
NR4A1-215ENST00000550557 MAST2Q6P0Q8 1798 aa12.26□□□□□ -0.45
NR4A1-215ENST00000550557 MTMR11A4FU01 709 aa12.26□□□□□ -0.45
NR4A1-215ENST00000550557 TMEM191CA6NGB0 347 aa12.26□□□□□ -0.45
NR4A1-215ENST00000550557 H3BQ06 376 aaPredicted RBP12.26□□□□□ -0.45
NR4A1-215ENST00000550557 ZNF623O75123 536 aa12.26□□□□□ -0.45
NR4A1-215ENST00000550557 CNMDO75829 334 aa12.26□□□□□ -0.45
NR4A1-215ENST00000550557 CPA3P15088 417 aa12.26□□□□□ -0.45
NR4A1-215ENST00000550557 PGS1Q32NB8 556 aa12.26□□□□□ -0.45
NR4A1-215ENST00000550557 TMEM259Q4ZIN3 620 aa12.26□□□□□ -0.45
NR4A1-215ENST00000550557 LACTB2Q53H82 288 aaPredicted RBP12.26□□□□□ -0.45
NR4A1-215ENST00000550557 WASHC2DQ5SRD0 308 aa12.26□□□□□ -0.45
NR4A1-215ENST00000550557 MBLAC2Q68D91 279 aa12.26□□□□□ -0.45
NR4A1-215ENST00000550557 CYP20A1Q6UW02 462 aa12.26□□□□□ -0.45
NR4A1-215ENST00000550557 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.26□□□□□ -0.45
NR4A1-215ENST00000550557 RAVER1Q8IY67 606 aaKnown RBP12.26□□□□□ -0.45
NR4A1-215ENST00000550557 RBFAQ8N0V3 343 aa12.26□□□□□ -0.45
NR4A1-215ENST00000550557 OR9Q1Q8NGQ5 310 aa12.26□□□□□ -0.45
NR4A1-215ENST00000550557 METTL6Q8TCB7 284 aa12.26□□□□□ -0.45
NR4A1-215ENST00000550557 ZNF398Q8TD17 642 aa12.26□□□□□ -0.45
NR4A1-215ENST00000550557 AGAP11Q8TF27 550 aa12.26□□□□□ -0.45
NR4A1-215ENST00000550557 CLIP3Q96DZ5 547 aa12.26□□□□□ -0.45
NR4A1-215ENST00000550557 CPNE1Q99829 537 aa12.26□□□□□ -0.45
NR4A1-215ENST00000550557 EBF3Q9H4W6 596 aa12.26□□□□□ -0.45
NR4A1-215ENST00000550557 GLOD4Q9HC38 313 aa12.26□□□□□ -0.45
NR4A1-215ENST00000550557 HPS4Q9NQG7 708 aa12.26□□□□□ -0.45
NR4A1-215ENST00000550557 PCDHGC3Q9UN70 934 aa12.26□□□□□ -0.45
NR4A1-215ENST00000550557 AURKCQ9UQB9 309 aa12.26□□□□□ -0.45
NR4A1-215ENST00000550557 FCF1Q9Y324 198 aaKnown RBP12.26□□□□□ -0.45
NR4A1-215ENST00000550557 GLI3P10071 1580 aa12.26□□□□□ -0.45
NR4A1-215ENST00000550557 MYH15Q9Y2K3 1946 aa12.26□□□□□ -0.45
NR4A1-215ENST00000550557 TAF1P21675 1872 aa12.25□□□□□ -0.45
NR4A1-215ENST00000550557 BTAF1O14981 1849 aa12.25□□□□□ -0.45
NR4A1-215ENST00000550557 ABCA3Q99758 1704 aa12.25□□□□□ -0.45
NR4A1-215ENST00000550557 LRIG2O94898 1065 aa12.25□□□□□ -0.45
NR4A1-215ENST00000550557 CPSF4O95639 269 aaKnown RBP12.25□□□□□ -0.45
NR4A1-215ENST00000550557 MPOP05164 745 aa12.25□□□□□ -0.45
NR4A1-215ENST00000550557 L1CAMP32004 1257 aa12.25□□□□□ -0.45
NR4A1-215ENST00000550557 CPA2P48052 419 aa12.25□□□□□ -0.45
NR4A1-215ENST00000550557 ARRB1P49407 418 aaPredicted RBP12.25□□□□□ -0.45
NR4A1-215ENST00000550557 CNSTQ6PJW8 725 aa12.25□□□□□ -0.45
NR4A1-215ENST00000550557 PARGQ86W56 976 aa12.25□□□□□ -0.45
NR4A1-215ENST00000550557 CRYGNQ8WXF5 182 aa12.25□□□□□ -0.45
NR4A1-215ENST00000550557 ZMAT2Q96NC0 199 aaKnown RBP12.25□□□□□ -0.45
NR4A1-215ENST00000550557 TOX2Q96NM4 488 aa12.25□□□□□ -0.45
NR4A1-215ENST00000550557 ECSITQ9BQ95 431 aa12.25□□□□□ -0.45
NR4A1-215ENST00000550557 IL1RL2Q9HB29 575 aa12.25□□□□□ -0.45
NR4A1-215ENST00000550557 COMMD8Q9NX08 183 aa12.25□□□□□ -0.45
NR4A1-215ENST00000550557 TM9SF1O15321 606 aa12.25□□□□□ -0.45
NR4A1-215ENST00000550557 IRAK2O43187 625 aa12.25□□□□□ -0.45
NR4A1-215ENST00000550557 RHOP08100 348 aa12.25□□□□□ -0.45
NR4A1-215ENST00000550557 CENPAP49450 140 aa12.25□□□□□ -0.45
NR4A1-215ENST00000550557 CDCA2Q69YH5 1023 aaPredicted RBP12.25□□□□□ -0.45
NR4A1-215ENST00000550557 KLK6Q92876 244 aa12.25□□□□□ -0.45
NR4A1-215ENST00000550557 LRRC39Q96DD0 335 aa12.25□□□□□ -0.45
NR4A1-215ENST00000550557 KLHL32Q96NJ5 620 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms