RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 NLGN3Q9NZ94 848 aa13.57□□□□□ -0.24
NUP188-211ENST00000550219 AMFRQ9UKV5 643 aa13.57□□□□□ -0.24
NUP188-211ENST00000550219 FZD10Q9ULW2 581 aa13.57□□□□□ -0.24
NUP188-211ENST00000550219 PCDHB1Q9Y5F3 818 aa13.57□□□□□ -0.24
NUP188-211ENST00000550219 NEMP2A6NFY4 417 aa13.56□□□□□ -0.24
NUP188-211ENST00000550219 EIF4E1BA6NMX2 242 aaKnown RBP13.56□□□□□ -0.24
NUP188-211ENST00000550219 RRP8O43159 456 aaKnown RBP13.56□□□□□ -0.24
NUP188-211ENST00000550219 SPINT1O43278 529 aa13.56□□□□□ -0.24
NUP188-211ENST00000550219 TSPAN6O43657 245 aa13.56□□□□□ -0.24
NUP188-211ENST00000550219 FTCDO95954 541 aa13.56□□□□□ -0.24
NUP188-211ENST00000550219 IGSF6O95976 241 aa13.56□□□□□ -0.24
NUP188-211ENST00000550219 KRT7P08729 469 aa13.56□□□□□ -0.24
NUP188-211ENST00000550219 GIMD1P0DJR0 217 aa13.56□□□□□ -0.24
NUP188-211ENST00000550219 CKMT1AP12532 417 aa13.56□□□□□ -0.24
NUP188-211ENST00000550219 NME1P15531 152 aaKnown RBP13.56□□□□□ -0.24
NUP188-211ENST00000550219 CTNNA1P35221 906 aaKnown RBP13.56□□□□□ -0.24
NUP188-211ENST00000550219 PEX5P50542 639 aa13.56□□□□□ -0.24
NUP188-211ENST00000550219 RHOAP61586 193 aa13.56□□□□□ -0.24
NUP188-211ENST00000550219 E2F1Q01094 437 aa13.56□□□□□ -0.24
NUP188-211ENST00000550219 RTP5Q14D33 572 aa13.56□□□□□ -0.24
NUP188-211ENST00000550219 TPRG1LQ5T0D9 272 aa13.56□□□□□ -0.24
NUP188-211ENST00000550219 ERMARDQ5T6L9 678 aa13.56□□□□□ -0.24
NUP188-211ENST00000550219 MEI1Q5TIA1 1274 aa13.56□□□□□ -0.24
NUP188-211ENST00000550219 GDPD4Q6W3E5 623 aa13.56□□□□□ -0.24
NUP188-211ENST00000550219 PEX26Q7Z412 305 aa13.56□□□□□ -0.24
NUP188-211ENST00000550219 DCP2Q8IU60 420 aaKnown RBP13.56□□□□□ -0.24
NUP188-211ENST00000550219 RHOT1Q8IXI2 618 aa13.56□□□□□ -0.24
NUP188-211ENST00000550219 RBFAQ8N0V3 343 aa13.56□□□□□ -0.24
NUP188-211ENST00000550219 SLC35F6Q8N357 371 aa13.56□□□□□ -0.24
NUP188-211ENST00000550219 RTL3Q8N8U3 475 aaKnown RBP13.56□□□□□ -0.24
NUP188-211ENST00000550219 DCBLD1Q8N8Z6 715 aa13.56□□□□□ -0.24
NUP188-211ENST00000550219 FAM174AQ8TBP5 190 aa13.56□□□□□ -0.24
NUP188-211ENST00000550219 FAM71BQ8TC56 605 aa13.56□□□□□ -0.24
NUP188-211ENST00000550219 LMX1AQ8TE12 382 aa13.56□□□□□ -0.24
NUP188-211ENST00000550219 RAB7BQ96AH8 199 aa13.56□□□□□ -0.24
NUP188-211ENST00000550219 HMCESQ96FZ2 354 aa13.56□□□□□ -0.24
NUP188-211ENST00000550219 BBC3Q96PG8 261 aaPredicted RBP13.56□□□□□ -0.24
NUP188-211ENST00000550219 SNRNP25Q9BV90 132 aaKnown RBP13.56□□□□□ -0.24
NUP188-211ENST00000550219 OSBPL1AQ9BXW6 950 aa13.56□□□□□ -0.24
NUP188-211ENST00000550219 GPR27Q9NS67 375 aa13.56□□□□□ -0.24
NUP188-211ENST00000550219 EVA1BQ9NVM1 165 aa13.56□□□□□ -0.24
NUP188-211ENST00000550219 PCSK1NQ9UHG2 260 aa13.56□□□□□ -0.24
NUP188-211ENST00000550219 JRKLQ9Y4A0 524 aa13.56□□□□□ -0.24
NUP188-211ENST00000550219 PCDHA3Q9Y5H8 950 aa13.56□□□□□ -0.24
NUP188-211ENST00000550219 HS3ST3A1Q9Y663 406 aa13.56□□□□□ -0.24
NUP188-211ENST00000550219 APC2O95996 2303 aa13.55□□□□□ -0.24
NUP188-211ENST00000550219 SPTY2D1-AS1A0A0U1RR47 76 aa13.55□□□□□ -0.24
NUP188-211ENST00000550219 CCDC66A2RUB6 948 aa13.55□□□□□ -0.24
NUP188-211ENST00000550219 ZSCAN5CA6NGD5 496 aaPredicted RBP13.55□□□□□ -0.24
NUP188-211ENST00000550219 MIF4GDA9UHW6 222 aaKnown RBP13.55□□□□□ -0.24
NUP188-211ENST00000550219 K7ESM1 405 aa13.55□□□□□ -0.24
NUP188-211ENST00000550219 SCAMP1O15126 338 aa13.55□□□□□ -0.24
NUP188-211ENST00000550219 DDX3YO15523 660 aaKnown RBP13.55□□□□□ -0.24
NUP188-211ENST00000550219 KDELR3O43731 214 aa13.55□□□□□ -0.24
NUP188-211ENST00000550219 OPA1O60313 960 aa13.55□□□□□ -0.24
NUP188-211ENST00000550219 POP4O95707 220 aaKnown RBP13.55□□□□□ -0.24
NUP188-211ENST00000550219 CSF2P04141 144 aa13.55□□□□□ -0.24
NUP188-211ENST00000550219 RARAP10276 462 aa13.55□□□□□ -0.24
NUP188-211ENST00000550219 JUNDP17535 347 aa13.55□□□□□ -0.24
NUP188-211ENST00000550219 MSNP26038 577 aaKnown RBP13.55□□□□□ -0.24
NUP188-211ENST00000550219 IGFALSP35858 605 aa13.55□□□□□ -0.24
NUP188-211ENST00000550219 EIF2S3P41091 472 aaKnown RBP13.55□□□□□ -0.24
NUP188-211ENST00000550219 ARSEP51690 589 aa13.55□□□□□ -0.24
NUP188-211ENST00000550219 THOP1P52888 689 aa13.55□□□□□ -0.24
NUP188-211ENST00000550219 RAD51Q06609 339 aa13.55□□□□□ -0.24
NUP188-211ENST00000550219 CDKN3Q16667 212 aa13.55□□□□□ -0.24
NUP188-211ENST00000550219 DEFB133Q30KQ1 61 aa13.55□□□□□ -0.24
NUP188-211ENST00000550219 MYLK3Q32MK0 819 aa13.55□□□□□ -0.24
NUP188-211ENST00000550219 ATP13A4Q4VNC1 1196 aa13.55□□□□□ -0.24
NUP188-211ENST00000550219 CRTC1Q6UUV9 634 aa13.55□□□□□ -0.24
NUP188-211ENST00000550219 DENND6BQ8NEG7 585 aa13.55□□□□□ -0.24
NUP188-211ENST00000550219 IFI44Q8TCB0 444 aa13.55□□□□□ -0.24
NUP188-211ENST00000550219 MAPK15Q8TD08 544 aa13.55□□□□□ -0.24
NUP188-211ENST00000550219 CXorf40AQ8TE69 158 aa13.55□□□□□ -0.24
NUP188-211ENST00000550219 KRT35Q92764 455 aa13.55□□□□□ -0.24
NUP188-211ENST00000550219 IFT43Q96FT9 208 aa13.55□□□□□ -0.24
NUP188-211ENST00000550219 DEPDC7Q96QD5 511 aa13.55□□□□□ -0.24
NUP188-211ENST00000550219 KLF6Q99612 283 aaPredicted RBP13.55□□□□□ -0.24
NUP188-211ENST00000550219 EPAS1Q99814 870 aa13.55□□□□□ -0.24
NUP188-211ENST00000550219 WRAP53Q9BUR4 548 aaKnown RBP13.55□□□□□ -0.24
NUP188-211ENST00000550219 DUSP23Q9BVJ7 150 aa13.55□□□□□ -0.24
NUP188-211ENST00000550219 TLR10Q9BXR5 811 aa13.55□□□□□ -0.24
NUP188-211ENST00000550219 KLC2Q9H0B6 622 aa13.55□□□□□ -0.24
NUP188-211ENST00000550219 ABCG4Q9H172 646 aa13.55□□□□□ -0.24
NUP188-211ENST00000550219 NOL6Q9H6R4 1146 aaKnown RBP13.55□□□□□ -0.24
NUP188-211ENST00000550219 GPATCH2LQ9NWQ4 482 aa13.55□□□□□ -0.24
NUP188-211ENST00000550219 ANKRD11Q6UB99 2663 aaPredicted RBP13.55□□□□□ -0.24
NUP188-211ENST00000550219 MYLKQ15746 1914 aa13.54□□□□□ -0.24
NUP188-211ENST00000550219 GOLGA4Q13439 2230 aaKnown RBP13.54□□□□□ -0.24
NUP188-211ENST00000550219 LY6G6EA0A0G2JKS1 128 aa13.54□□□□□ -0.24
NUP188-211ENST00000550219 CPED1A4D0V7 1026 aa13.54□□□□□ -0.24
NUP188-211ENST00000550219 RASA4BC9J798 803 aa13.54□□□□□ -0.24
NUP188-211ENST00000550219 INSIG1O15503 277 aa13.54□□□□□ -0.24
NUP188-211ENST00000550219 AQP9O43315 295 aa13.54□□□□□ -0.24
NUP188-211ENST00000550219 RASA4O43374 803 aa13.54□□□□□ -0.24
NUP188-211ENST00000550219 MMP20O60882 483 aa13.54□□□□□ -0.24
NUP188-211ENST00000550219 CSO75390 466 aaKnown RBP13.54□□□□□ -0.24
NUP188-211ENST00000550219 PIGNO95427 931 aa13.54□□□□□ -0.24
NUP188-211ENST00000550219 MPOP05164 745 aa13.54□□□□□ -0.24
NUP188-211ENST00000550219 ITIH2P19823 946 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms