RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 GRM3Q14832 879 aa9.94□□□□□ -0.82
TRAFD1-207ENST00000550051 NFATC4Q14934 902 aa9.94□□□□□ -0.82
TRAFD1-207ENST00000550051 IRF4Q15306 451 aa9.94□□□□□ -0.82
TRAFD1-207ENST00000550051 UGP2Q16851 508 aa9.94□□□□□ -0.82
TRAFD1-207ENST00000550051 VWA3BQ502W6 1294 aa9.94□□□□□ -0.82
TRAFD1-207ENST00000550051 RAB6CQ53S08 254 aa9.94□□□□□ -0.82
TRAFD1-207ENST00000550051 C2CD6Q53TS8 623 aa9.94□□□□□ -0.82
TRAFD1-207ENST00000550051 ATXN7L2Q5T6C5 722 aaPredicted RBP9.94□□□□□ -0.82
TRAFD1-207ENST00000550051 KLHDC7AQ5VTJ3 777 aa9.94□□□□□ -0.82
TRAFD1-207ENST00000550051 LEKR1Q6ZMV7 388 aa9.94□□□□□ -0.82
TRAFD1-207ENST00000550051 NOP9Q86U38 636 aaKnown RBP9.94□□□□□ -0.82
TRAFD1-207ENST00000550051 JAMLQ86YT9 394 aa9.94□□□□□ -0.82
TRAFD1-207ENST00000550051 EMC1Q8N766 993 aa9.94□□□□□ -0.82
TRAFD1-207ENST00000550051 MLKLQ8NB16 471 aa9.94□□□□□ -0.82
TRAFD1-207ENST00000550051 PCDH19Q8TAB3 1148 aa9.94□□□□□ -0.82
TRAFD1-207ENST00000550051 RXFP2Q8WXD0 754 aa9.94□□□□□ -0.82
TRAFD1-207ENST00000550051 CPA5Q8WXQ8 436 aa9.94□□□□□ -0.82
TRAFD1-207ENST00000550051 EXTL1Q92935 676 aa9.94□□□□□ -0.82
TRAFD1-207ENST00000550051 TBC1D31Q96DN5 1066 aa9.94□□□□□ -0.82
TRAFD1-207ENST00000550051 ZNF641Q96N77 438 aaPredicted RBP9.94□□□□□ -0.82
TRAFD1-207ENST00000550051 ARHGAP9Q9BRR9 750 aa9.94□□□□□ -0.82
TRAFD1-207ENST00000550051 WRAP53Q9BUR4 548 aaKnown RBP9.94□□□□□ -0.82
TRAFD1-207ENST00000550051 STK33Q9BYT3 514 aa9.94□□□□□ -0.82
TRAFD1-207ENST00000550051 MAGEB5Q9BZ81 275 aa9.94□□□□□ -0.82
TRAFD1-207ENST00000550051 RAB6CQ9H0N0 254 aa9.94□□□□□ -0.82
TRAFD1-207ENST00000550051 NOL6Q9H6R4 1146 aaKnown RBP9.94□□□□□ -0.82
TRAFD1-207ENST00000550051 SIRPGQ9P1W8 387 aa9.94□□□□□ -0.82
TRAFD1-207ENST00000550051 SPTA1P02549 2419 aa9.94□□□□□ -0.82
TRAFD1-207ENST00000550051 TSPAN11A1L157 253 aa9.93□□□□□ -0.82
TRAFD1-207ENST00000550051 C2CD4BA6NLJ0 364 aa9.93□□□□□ -0.82
TRAFD1-207ENST00000550051 TNFRSF10CO14798 259 aa9.93□□□□□ -0.82
TRAFD1-207ENST00000550051 GADD45BO75293 160 aaPredicted RBP9.93□□□□□ -0.82
TRAFD1-207ENST00000550051 IGSF6O95976 241 aa9.93□□□□□ -0.82
TRAFD1-207ENST00000550051 MMEP08473 750 aa9.93□□□□□ -0.82
TRAFD1-207ENST00000550051 HGFP14210 728 aa9.93□□□□□ -0.82
TRAFD1-207ENST00000550051 CD82P27701 267 aa9.93□□□□□ -0.82
TRAFD1-207ENST00000550051 SDC4P31431 198 aa9.93□□□□□ -0.82
TRAFD1-207ENST00000550051 HDAC4P56524 1084 aa9.93□□□□□ -0.82
TRAFD1-207ENST00000550051 SRSF1Q07955 248 aaKnown RBP eCLIP9.93□□□□□ -0.82
TRAFD1-207ENST00000550051 MTM1Q13496 603 aa9.93□□□□□ -0.82
TRAFD1-207ENST00000550051 CYTH1Q15438 398 aa9.93□□□□□ -0.82
TRAFD1-207ENST00000550051 TBR1Q16650 682 aa9.93□□□□□ -0.82
TRAFD1-207ENST00000550051 C15orf59Q2T9L4 293 aaPredicted RBP9.93□□□□□ -0.82
TRAFD1-207ENST00000550051 LRRC73Q5JTD7 316 aa9.93□□□□□ -0.82
TRAFD1-207ENST00000550051 MIIPQ5JXC2 388 aa9.93□□□□□ -0.82
TRAFD1-207ENST00000550051 MANEAQ5SRI9 462 aa9.93□□□□□ -0.82
TRAFD1-207ENST00000550051 CERCAMQ5T4B2 595 aa9.93□□□□□ -0.82
TRAFD1-207ENST00000550051 NAA35Q5VZE5 725 aa9.93□□□□□ -0.82
TRAFD1-207ENST00000550051 RD3Q7Z3Z2 195 aa9.93□□□□□ -0.82
TRAFD1-207ENST00000550051 ZNF677Q86XU0 584 aa9.93□□□□□ -0.82
TRAFD1-207ENST00000550051 CCNJLQ8IV13 435 aa9.93□□□□□ -0.82
TRAFD1-207ENST00000550051 ZSCAN1Q8NBB4 408 aa9.93□□□□□ -0.82
TRAFD1-207ENST00000550051 ZDHHC16Q969W1 377 aa9.93□□□□□ -0.82
TRAFD1-207ENST00000550051 NTAN1Q96AB6 310 aa9.93□□□□□ -0.82
TRAFD1-207ENST00000550051 HMCESQ96FZ2 354 aa9.93□□□□□ -0.82
TRAFD1-207ENST00000550051 WDR92Q96MX6 357 aa9.93□□□□□ -0.82
TRAFD1-207ENST00000550051 CMKLR1Q99788 373 aa9.93□□□□□ -0.82
TRAFD1-207ENST00000550051 TUBGCP2Q9BSJ2 902 aa9.93□□□□□ -0.82
TRAFD1-207ENST00000550051 KLC2Q9H0B6 622 aa9.93□□□□□ -0.82
TRAFD1-207ENST00000550051 SUV39H2Q9H5I1 410 aa9.93□□□□□ -0.82
TRAFD1-207ENST00000550051 SYNDIG1Q9H7V2 258 aa9.93□□□□□ -0.82
TRAFD1-207ENST00000550051 PISDQ9UG56 409 aa9.93□□□□□ -0.82
TRAFD1-207ENST00000550051 DAAM1Q9Y4D1 1078 aa9.93□□□□□ -0.82
TRAFD1-207ENST00000550051 LOXL2Q9Y4K0 774 aa9.93□□□□□ -0.82
TRAFD1-207ENST00000550051 PCDHB11Q9Y5F2 797 aa9.93□□□□□ -0.82
TRAFD1-207ENST00000550051 ARHGEF17Q96PE2 2063 aaPredicted RBP9.93□□□□□ -0.82
TRAFD1-207ENST00000550051 BOD1L1Q8NFC6 3051 aa9.92□□□□□ -0.82
TRAFD1-207ENST00000550051 PRAMEF33A0A0G2JMD5 474 aa9.92□□□□□ -0.82
TRAFD1-207ENST00000550051 WASH4PA8MWX3 477 aa9.92□□□□□ -0.82
TRAFD1-207ENST00000550051 INSIG1O15503 277 aa9.92□□□□□ -0.82
TRAFD1-207ENST00000550051 NUDT21O43809 227 aaKnown RBP9.92□□□□□ -0.82
TRAFD1-207ENST00000550051 PRAMEF10O60809 474 aa9.92□□□□□ -0.82
TRAFD1-207ENST00000550051 CYP1A1P04798 512 aaPredicted RBP9.92□□□□□ -0.82
TRAFD1-207ENST00000550051 FAM87AP0C7U9 286 aa9.92□□□□□ -0.82
TRAFD1-207ENST00000550051 UCHL3P15374 230 aa9.92□□□□□ -0.82
TRAFD1-207ENST00000550051 XPAP23025 273 aaPredicted RBP9.92□□□□□ -0.82
TRAFD1-207ENST00000550051 TRIM23P36406 574 aa9.92□□□□□ -0.82
TRAFD1-207ENST00000550051 LIG3P49916 1009 aa9.92□□□□□ -0.82
TRAFD1-207ENST00000550051 RHOAP61586 193 aa9.92□□□□□ -0.82
TRAFD1-207ENST00000550051 SRSF6Q13247 344 aaKnown RBP9.92□□□□□ -0.82
TRAFD1-207ENST00000550051 SERINC3Q13530 473 aa9.92□□□□□ -0.82
TRAFD1-207ENST00000550051 RAPGEF1Q13905 1077 aa9.92□□□□□ -0.82
TRAFD1-207ENST00000550051 CLPPQ16740 277 aaPredicted RBP9.92□□□□□ -0.82
TRAFD1-207ENST00000550051 PARP15Q460N3 678 aa9.92□□□□□ -0.82
TRAFD1-207ENST00000550051 TAF3Q5VWG9 929 aa9.92□□□□□ -0.82
TRAFD1-207ENST00000550051 BRAT1Q6PJG6 821 aa9.92□□□□□ -0.82
TRAFD1-207ENST00000550051 ZNF574Q6ZN55 896 aaPredicted RBP9.92□□□□□ -0.82
TRAFD1-207ENST00000550051 DNAAF5Q86Y56 855 aa9.92□□□□□ -0.82
TRAFD1-207ENST00000550051 SLITRK4Q8IW52 837 aa9.92□□□□□ -0.82
TRAFD1-207ENST00000550051 FAM114A1Q8IWE2 563 aa9.92□□□□□ -0.82
TRAFD1-207ENST00000550051 UMODL1-AS1Q8N2C9 162 aa9.92□□□□□ -0.82
TRAFD1-207ENST00000550051 RTL3Q8N8U3 475 aaKnown RBP9.92□□□□□ -0.82
TRAFD1-207ENST00000550051 FAM46DQ8NEK8 389 aa9.92□□□□□ -0.82
TRAFD1-207ENST00000550051 GPT2Q8TD30 523 aa9.92□□□□□ -0.82
TRAFD1-207ENST00000550051 EPS8L1Q8TE68 723 aa9.92□□□□□ -0.82
TRAFD1-207ENST00000550051 USP7Q93009 1102 aa9.92□□□□□ -0.82
TRAFD1-207ENST00000550051 PCDH12Q9NPG4 1184 aa9.92□□□□□ -0.82
TRAFD1-207ENST00000550051 METTL5Q9NRN9 209 aaKnown RBP9.92□□□□□ -0.82
TRAFD1-207ENST00000550051 GEMIN8Q9NWZ8 242 aaKnown RBP9.92□□□□□ -0.82
TRAFD1-207ENST00000550051 LRIT1Q9P2V4 623 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms