RNA–Protein interactions for RNA: ENST00000549613.1

CALCOCO1-214, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 884 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-214ENST00000549613 PRLP01236 227 aa13.78□□□□□ -0.2
CALCOCO1-214ENST00000549613 MT-ND3P03897 115 aa13.78□□□□□ -0.2
CALCOCO1-214ENST00000549613 DLDP09622 509 aaKnown RBP13.78□□□□□ -0.2
CALCOCO1-214ENST00000549613 ERVK-10P10266 1014 aa13.78□□□□□ -0.2
CALCOCO1-214ENST00000549613 HPDP32754 393 aaPredicted RBP13.78□□□□□ -0.2
CALCOCO1-214ENST00000549613 EIF2DP41214 584 aaKnown RBP13.78□□□□□ -0.2
CALCOCO1-214ENST00000549613 STK19P49842 368 aaPredicted RBP13.78□□□□□ -0.2
CALCOCO1-214ENST00000549613 PDE1BQ01064 536 aa13.78□□□□□ -0.2
CALCOCO1-214ENST00000549613 ILF2Q12905 390 aaKnown RBP13.78□□□□□ -0.2
CALCOCO1-214ENST00000549613 TRAF2Q12933 501 aa13.78□□□□□ -0.2
CALCOCO1-214ENST00000549613 THOC5Q13769 683 aaKnown RBP13.78□□□□□ -0.2
CALCOCO1-214ENST00000549613 GALNT3Q14435 633 aa13.78□□□□□ -0.2
CALCOCO1-214ENST00000549613 E2F5Q15329 346 aa13.78□□□□□ -0.2
CALCOCO1-214ENST00000549613 CNGA3Q16281 694 aa13.78□□□□□ -0.2
CALCOCO1-214ENST00000549613 UGP2Q16851 508 aa13.78□□□□□ -0.2
CALCOCO1-214ENST00000549613 ESRP1Q6NXG1 681 aaKnown RBP13.78□□□□□ -0.2
CALCOCO1-214ENST00000549613 TRABD2AQ86V40 505 aa13.78□□□□□ -0.2
CALCOCO1-214ENST00000549613 LMNTD2Q8IXW0 634 aa13.78□□□□□ -0.2
CALCOCO1-214ENST00000549613 SMRP1Q8NCR6 262 aa13.78□□□□□ -0.2
CALCOCO1-214ENST00000549613 LPCAT1Q8NF37 534 aa13.78□□□□□ -0.2
CALCOCO1-214ENST00000549613 BLOC1S5Q8TDH9 187 aa13.78□□□□□ -0.2
CALCOCO1-214ENST00000549613 STYXQ8WUJ0 223 aa13.78□□□□□ -0.2
CALCOCO1-214ENST00000549613 PDCD6IPQ8WUM4 868 aaKnown RBP13.78□□□□□ -0.2
CALCOCO1-214ENST00000549613 UCMAQ8WVF2 138 aa13.78□□□□□ -0.2
CALCOCO1-214ENST00000549613 SUSD6Q92537 303 aa13.78□□□□□ -0.2
CALCOCO1-214ENST00000549613 SPOCK2Q92563 424 aa13.78□□□□□ -0.2
CALCOCO1-214ENST00000549613 ALKBH8Q96BT7 664 aaKnown RBP13.78□□□□□ -0.2
CALCOCO1-214ENST00000549613 ZNF641Q96N77 438 aaPredicted RBP13.78□□□□□ -0.2
CALCOCO1-214ENST00000549613 SMC6Q96SB8 1091 aa13.78□□□□□ -0.2
CALCOCO1-214ENST00000549613 FAM167BQ9BTA0 163 aa13.78□□□□□ -0.2
CALCOCO1-214ENST00000549613 PLA2G2FQ9BZM2 168 aa13.78□□□□□ -0.2
CALCOCO1-214ENST00000549613 CIPCQ9C0C6 399 aa13.78□□□□□ -0.2
CALCOCO1-214ENST00000549613 TNKS2Q9H2K2 1166 aa13.78□□□□□ -0.2
CALCOCO1-214ENST00000549613 TRABDQ9H4I3 376 aa13.78□□□□□ -0.2
CALCOCO1-214ENST00000549613 ELOVL2Q9NXB9 296 aa13.78□□□□□ -0.2
CALCOCO1-214ENST00000549613 SLCO3A1Q9UIG8 710 aa13.78□□□□□ -0.2
CALCOCO1-214ENST00000549613 ADAM21Q9UKJ8 722 aa13.78□□□□□ -0.2
CALCOCO1-214ENST00000549613 PLA2G4CQ9UP65 541 aa13.78□□□□□ -0.2
CALCOCO1-214ENST00000549613 PRRC2BQ5JSZ5 2229 aaKnown RBP13.78□□□□□ -0.2
CALCOCO1-214ENST00000549613 SLC7A4O43246 635 aa13.77□□□□□ -0.21
CALCOCO1-214ENST00000549613 HTRA2O43464 458 aaPredicted RBP13.77□□□□□ -0.21
CALCOCO1-214ENST00000549613 LDB2O43679 373 aa13.77□□□□□ -0.21
CALCOCO1-214ENST00000549613 FZD6O60353 706 aa13.77□□□□□ -0.21
CALCOCO1-214ENST00000549613 ZNF821O75541 412 aaPredicted RBP13.77□□□□□ -0.21
CALCOCO1-214ENST00000549613 BRAFP15056 766 aa13.77□□□□□ -0.21
CALCOCO1-214ENST00000549613 GDI1P31150 447 aa13.77□□□□□ -0.21
CALCOCO1-214ENST00000549613 SPRP35270 261 aaPredicted RBP13.77□□□□□ -0.21
CALCOCO1-214ENST00000549613 GP5P40197 560 aa13.77□□□□□ -0.21
CALCOCO1-214ENST00000549613 GRIA4P48058 902 aa13.77□□□□□ -0.21
CALCOCO1-214ENST00000549613 SLC6A11P48066 632 aa13.77□□□□□ -0.21
CALCOCO1-214ENST00000549613 CSE1LP55060 971 aaKnown RBP13.77□□□□□ -0.21
CALCOCO1-214ENST00000549613 TAF1AQ15573 450 aaPredicted RBP13.77□□□□□ -0.21
CALCOCO1-214ENST00000549613 QPCTQ16769 361 aa13.77□□□□□ -0.21
CALCOCO1-214ENST00000549613 ITPRIPL2Q3MIP1 535 aa13.77□□□□□ -0.21
CALCOCO1-214ENST00000549613 TEDDM1Q5T9Z0 273 aa13.77□□□□□ -0.21
CALCOCO1-214ENST00000549613 TMEM215Q68D42 235 aa13.77□□□□□ -0.21
CALCOCO1-214ENST00000549613 PARM1Q6UWI2 310 aa13.77□□□□□ -0.21
CALCOCO1-214ENST00000549613 PACS1Q6VY07 963 aa13.77□□□□□ -0.21
CALCOCO1-214ENST00000549613 CAMK1DQ8IU85 385 aa13.77□□□□□ -0.21
CALCOCO1-214ENST00000549613 UNC5BQ8IZJ1 945 aa13.77□□□□□ -0.21
CALCOCO1-214ENST00000549613 MICALL1Q8N3F8 863 aa13.77□□□□□ -0.21
CALCOCO1-214ENST00000549613 MYO19Q96H55 970 aa13.77□□□□□ -0.21
CALCOCO1-214ENST00000549613 NSMCE3Q96MG7 304 aa13.77□□□□□ -0.21
CALCOCO1-214ENST00000549613 CDX2Q99626 313 aaPredicted RBP13.77□□□□□ -0.21
CALCOCO1-214ENST00000549613 KXD1Q9BQD3 176 aa13.77□□□□□ -0.21
CALCOCO1-214ENST00000549613 SSU72Q9NP77 194 aaKnown RBP13.77□□□□□ -0.21
CALCOCO1-214ENST00000549613 USP15Q9Y4E8 981 aaPredicted RBP13.77□□□□□ -0.21
CALCOCO1-214ENST00000549613 PCDHB9Q9Y5E1 797 aa13.77□□□□□ -0.21
CALCOCO1-214ENST00000549613 WASH3PC4AMC7 463 aa13.76□□□□□ -0.21
CALCOCO1-214ENST00000549613 TRIM24O15164 1050 aa13.76□□□□□ -0.21
CALCOCO1-214ENST00000549613 SIN3BO75182 1162 aa13.76□□□□□ -0.21
CALCOCO1-214ENST00000549613 PIAS1O75925 651 aa13.76□□□□□ -0.21
CALCOCO1-214ENST00000549613 FAM155BO75949 473 aa13.76□□□□□ -0.21
CALCOCO1-214ENST00000549613 VAPBO95292 243 aa13.76□□□□□ -0.21
CALCOCO1-214ENST00000549613 PDHA1P08559 390 aa13.76□□□□□ -0.21
CALCOCO1-214ENST00000549613 GJA4P35212 333 aa13.76□□□□□ -0.21
CALCOCO1-214ENST00000549613 HADHAP40939 763 aa13.76□□□□□ -0.21
CALCOCO1-214ENST00000549613 ARCN1P48444 511 aaKnown RBP13.76□□□□□ -0.21
CALCOCO1-214ENST00000549613 CCNHP51946 323 aaPredicted RBP13.76□□□□□ -0.21
CALCOCO1-214ENST00000549613 SLC18A1P54219 525 aa13.76□□□□□ -0.21
CALCOCO1-214ENST00000549613 POLR2LP62875 67 aaKnown RBP13.76□□□□□ -0.21
CALCOCO1-214ENST00000549613 ACVR1Q04771 509 aa13.76□□□□□ -0.21
CALCOCO1-214ENST00000549613 GRM2Q14416 872 aa13.76□□□□□ -0.21
CALCOCO1-214ENST00000549613 GAB4Q2WGN9 574 aa13.76□□□□□ -0.21
CALCOCO1-214ENST00000549613 HSP90AA5PQ58FG0 334 aa13.76□□□□□ -0.21
CALCOCO1-214ENST00000549613 NEPROQ6NW34 567 aa13.76□□□□□ -0.21
CALCOCO1-214ENST00000549613 TIFABQ6ZNK6 161 aa13.76□□□□□ -0.21
CALCOCO1-214ENST00000549613 C12orf40Q86WS4 652 aa13.76□□□□□ -0.21
CALCOCO1-214ENST00000549613 SRRM1Q8IYB3 904 aaKnown RBP13.76□□□□□ -0.21
CALCOCO1-214ENST00000549613 CSGALNACT1Q8TDX6 532 aa13.76□□□□□ -0.21
CALCOCO1-214ENST00000549613 PIH1D2Q8WWB5 315 aa13.76□□□□□ -0.21
CALCOCO1-214ENST00000549613 FGF14Q92915 247 aa13.76□□□□□ -0.21
CALCOCO1-214ENST00000549613 PTPRN2Q92932 1015 aa13.76□□□□□ -0.21
CALCOCO1-214ENST00000549613 LRIG1Q96JA1 1093 aa13.76□□□□□ -0.21
CALCOCO1-214ENST00000549613 MRGPRX3Q96LB0 322 aa13.76□□□□□ -0.21
CALCOCO1-214ENST00000549613 ZNF778Q96MU6 729 aa13.76□□□□□ -0.21
CALCOCO1-214ENST00000549613 SELENOSQ9BQE4 189 aa13.76□□□□□ -0.21
CALCOCO1-214ENST00000549613 HEPHQ9BQS7 1158 aa13.76□□□□□ -0.21
CALCOCO1-214ENST00000549613 SUV39H2Q9H5I1 410 aa13.76□□□□□ -0.21
CALCOCO1-214ENST00000549613 MAGEE1Q9HCI5 957 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms