RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 MTTPP55157 894 aa11.18□□□□□ -0.62
LINC00661-204ENST00000549354 LSAMPQ13449 338 aa11.18□□□□□ -0.62
LINC00661-204ENST00000549354 CEACAM7Q14002 265 aa11.18□□□□□ -0.62
LINC00661-204ENST00000549354 MYLK3Q32MK0 819 aa11.18□□□□□ -0.62
LINC00661-204ENST00000549354 FAM91A1Q658Y4 838 aa11.18□□□□□ -0.62
LINC00661-204ENST00000549354 ANKRD33Q7Z3H0 272 aa11.18□□□□□ -0.62
LINC00661-204ENST00000549354 KCNMB4Q86W47 210 aa11.18□□□□□ -0.62
LINC00661-204ENST00000549354 APLFQ8IW19 511 aaPredicted RBP11.18□□□□□ -0.62
LINC00661-204ENST00000549354 KYQ8NBH2 561 aa11.18□□□□□ -0.62
LINC00661-204ENST00000549354 LRRC39Q96DD0 335 aa11.18□□□□□ -0.62
LINC00661-204ENST00000549354 FUBP3Q96I24 572 aaKnown RBP eCLIP11.18□□□□□ -0.62
LINC00661-204ENST00000549354 XPR1Q9UBH6 696 aa11.18□□□□□ -0.62
LINC00661-204ENST00000549354 TRIM17Q9Y577 477 aa11.18□□□□□ -0.62
LINC00661-204ENST00000549354 SNX13Q9Y5W8 968 aa11.18□□□□□ -0.62
LINC00661-204ENST00000549354 IL1BP01584 269 aa11.17□□□□□ -0.62
LINC00661-204ENST00000549354 PABPC4LP0CB38 370 aaKnown RBP11.17□□□□□ -0.62
LINC00661-204ENST00000549354 PSMC3P17980 439 aa11.17□□□□□ -0.62
LINC00661-204ENST00000549354 MAGEA3P43357 314 aa11.17□□□□□ -0.62
LINC00661-204ENST00000549354 SLC12A2P55011 1212 aa11.17□□□□□ -0.62
LINC00661-204ENST00000549354 CDH15P55291 814 aa11.17□□□□□ -0.62
LINC00661-204ENST00000549354 FUT11Q495W5 492 aa11.17□□□□□ -0.62
LINC00661-204ENST00000549354 ZNF789Q5FWF6 425 aa11.17□□□□□ -0.62
LINC00661-204ENST00000549354 FSCBQ5H9T9 825 aa11.17□□□□□ -0.62
LINC00661-204ENST00000549354 UTS2BQ765I0 119 aa11.17□□□□□ -0.62
LINC00661-204ENST00000549354 MYO1HQ8N1T3 1032 aa11.17□□□□□ -0.62
LINC00661-204ENST00000549354 DBF4BQ8NFT6 615 aa11.17□□□□□ -0.62
LINC00661-204ENST00000549354 SEPT8Q92599 483 aa11.17□□□□□ -0.62
LINC00661-204ENST00000549354 VPS39Q96JC1 886 aa11.17□□□□□ -0.62
LINC00661-204ENST00000549354 IL37Q9NZH6 218 aa11.17□□□□□ -0.62
LINC00661-204ENST00000549354 COMMD3-BMI1R4GMX3 469 aa11.17□□□□□ -0.62
LINC00661-204ENST00000549354 KCNU1A8MYU2 1149 aa11.17□□□□□ -0.62
LINC00661-204ENST00000549354 TRIM13O60858 407 aa11.17□□□□□ -0.62
LINC00661-204ENST00000549354 SUPT3HO75486 399 aa11.17□□□□□ -0.62
LINC00661-204ENST00000549354 SOAT2O75908 522 aa11.17□□□□□ -0.62
LINC00661-204ENST00000549354 PARNO95453 639 aaKnown RBP11.17□□□□□ -0.62
LINC00661-204ENST00000549354 PGAM1P18669 254 aa11.17□□□□□ -0.62
LINC00661-204ENST00000549354 GRK2P25098 689 aa11.17□□□□□ -0.62
LINC00661-204ENST00000549354 NIPAL4Q0D2K0 466 aa11.17□□□□□ -0.62
LINC00661-204ENST00000549354 SEMA5AQ13591 1074 aa11.17□□□□□ -0.62
LINC00661-204ENST00000549354 CYLC2Q14093 348 aaPredicted RBP11.17□□□□□ -0.62
LINC00661-204ENST00000549354 TCTN1Q2MV58 587 aa11.17□□□□□ -0.62
LINC00661-204ENST00000549354 RARS2Q5T160 578 aaKnown RBP11.17□□□□□ -0.62
LINC00661-204ENST00000549354 BNC2Q6ZN30 1099 aaPredicted RBP11.17□□□□□ -0.62
LINC00661-204ENST00000549354 MIB1Q86YT6 1006 aa11.17□□□□□ -0.62
LINC00661-204ENST00000549354 C8orf48Q96LL4 319 aa11.17□□□□□ -0.62
LINC00661-204ENST00000549354 DCUN1D5Q9BTE7 237 aa11.17□□□□□ -0.62
LINC00661-204ENST00000549354 FICDQ9BVA6 458 aa11.17□□□□□ -0.62
LINC00661-204ENST00000549354 COLEC11Q9BWP8 271 aa11.17□□□□□ -0.62
LINC00661-204ENST00000549354 ILKAPQ9H0C8 392 aaPredicted RBP11.17□□□□□ -0.62
LINC00661-204ENST00000549354 NDFIP2Q9NV92 336 aa11.17□□□□□ -0.62
LINC00661-204ENST00000549354 UTP6Q9NYH9 597 aaKnown RBP11.17□□□□□ -0.62
LINC00661-204ENST00000549354 DNAJB4Q9UDY4 337 aa11.17□□□□□ -0.62
LINC00661-204ENST00000549354 CDY1Q9Y6F8 540 aa11.17□□□□□ -0.62
LINC00661-204ENST00000549354 PLXNA3P51805 1871 aa11.17□□□□□ -0.62
LINC00661-204ENST00000549354 SAC3D1A6NKF1 404 aa11.17□□□□□ -0.62
LINC00661-204ENST00000549354 VILLO15195 856 aa11.17□□□□□ -0.62
LINC00661-204ENST00000549354 GPC4O75487 556 aa11.17□□□□□ -0.62
LINC00661-204ENST00000549354 SMIM18P0DKX4 95 aa11.17□□□□□ -0.62
LINC00661-204ENST00000549354 TFEBP19484 476 aa11.17□□□□□ -0.62
LINC00661-204ENST00000549354 MAGEA11P43364 429 aa11.17□□□□□ -0.62
LINC00661-204ENST00000549354 GLUD2P49448 558 aa11.17□□□□□ -0.62
LINC00661-204ENST00000549354 ZNF470Q6ECI4 717 aa11.17□□□□□ -0.62
LINC00661-204ENST00000549354 LCA5Q86VQ0 697 aa11.17□□□□□ -0.62
LINC00661-204ENST00000549354 CIR1Q86X95 450 aaPredicted RBP11.17□□□□□ -0.62
LINC00661-204ENST00000549354 DCP1BQ8IZD4 617 aaKnown RBP11.17□□□□□ -0.62
LINC00661-204ENST00000549354 PARP8Q8N3A8 854 aa11.17□□□□□ -0.62
LINC00661-204ENST00000549354 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.17□□□□□ -0.62
LINC00661-204ENST00000549354 KLHL32Q96NJ5 620 aa11.17□□□□□ -0.62
LINC00661-204ENST00000549354 SMIM14Q96QK8 99 aa11.17□□□□□ -0.62
LINC00661-204ENST00000549354 ACE2Q9BYF1 805 aaPredicted RBP11.17□□□□□ -0.62
LINC00661-204ENST00000549354 WDR41Q9HAD4 459 aa11.17□□□□□ -0.62
LINC00661-204ENST00000549354 LMCD1Q9NZU5 365 aa11.17□□□□□ -0.62
LINC00661-204ENST00000549354 OR12D3Q9UGF7 316 aa11.17□□□□□ -0.62
LINC00661-204ENST00000549354 PCDHB7Q9Y5E2 793 aa11.17□□□□□ -0.62
LINC00661-204ENST00000549354 LRRC14BA6NHZ5 514 aa11.16□□□□□ -0.62
LINC00661-204ENST00000549354 PPP6CO00743 305 aa11.16□□□□□ -0.62
LINC00661-204ENST00000549354 TBC1D4O60343 1298 aa11.16□□□□□ -0.62
LINC00661-204ENST00000549354 EFEMP2O95967 443 aa11.16□□□□□ -0.62
LINC00661-204ENST00000549354 CKMT2P17540 419 aa11.16□□□□□ -0.62
LINC00661-204ENST00000549354 GARSP41250 739 aaKnown RBP11.16□□□□□ -0.62
LINC00661-204ENST00000549354 MYBPC1Q00872 1141 aa11.16□□□□□ -0.62
LINC00661-204ENST00000549354 PPP1R8Q12972 351 aaKnown RBP11.16□□□□□ -0.62
LINC00661-204ENST00000549354 ARTNQ5T4W7 220 aa11.16□□□□□ -0.62
LINC00661-204ENST00000549354 C1orf53Q5VUE5 145 aa11.16□□□□□ -0.62
LINC00661-204ENST00000549354 IL23RQ5VWK5 629 aa11.16□□□□□ -0.62
LINC00661-204ENST00000549354 SEL1L3Q68CR1 1132 aa11.16□□□□□ -0.62
LINC00661-204ENST00000549354 EPGNQ6UW88 154 aa11.16□□□□□ -0.62
LINC00661-204ENST00000549354 SPATA2LQ8IUW3 424 aaPredicted RBP11.16□□□□□ -0.62
LINC00661-204ENST00000549354 TRIML2Q8N7C3 387 aa11.16□□□□□ -0.62
LINC00661-204ENST00000549354 OR52K2Q8NGK3 314 aa11.16□□□□□ -0.62
LINC00661-204ENST00000549354 PDCD6IPQ8WUM4 868 aaKnown RBP11.16□□□□□ -0.62
LINC00661-204ENST00000549354 NUDT8Q8WV74 236 aa11.16□□□□□ -0.62
LINC00661-204ENST00000549354 EXOC2Q96KP1 924 aa11.16□□□□□ -0.62
LINC00661-204ENST00000549354 FERMT1Q9BQL6 677 aa11.16□□□□□ -0.62
LINC00661-204ENST00000549354 TMEM175Q9BSA9 504 aa11.16□□□□□ -0.62
LINC00661-204ENST00000549354 FSD1LQ9BXM9 530 aa11.16□□□□□ -0.62
LINC00661-204ENST00000549354 OSBPL2Q9H1P3 480 aa11.16□□□□□ -0.62
LINC00661-204ENST00000549354 SOX17Q9H6I2 414 aaPredicted RBP11.16□□□□□ -0.62
LINC00661-204ENST00000549354 WDCPQ9H6R7 721 aa11.16□□□□□ -0.62
LINC00661-204ENST00000549354 SARS2Q9NP81 518 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms