RNA–Protein interactions for RNA: ENST00000549205.1

ERBB3-208, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 5

Gene ERBB3, Length 971 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-208ENST00000549205 CCDC38Q502W7 563 aa12.31□□□□□ -0.44
ERBB3-208ENST00000549205 ZNF805Q5CZA5 627 aa12.31□□□□□ -0.44
ERBB3-208ENST00000549205 BEND6Q5SZJ8 279 aaPredicted RBP12.31□□□□□ -0.44
ERBB3-208ENST00000549205 CFAP58Q5T655 872 aa12.31□□□□□ -0.44
ERBB3-208ENST00000549205 ARMC3Q5W041 872 aa12.31□□□□□ -0.44
ERBB3-208ENST00000549205 TRMT10CQ7L0Y3 403 aaKnown RBP12.31□□□□□ -0.44
ERBB3-208ENST00000549205 ANKMY2Q8IV38 441 aa12.31□□□□□ -0.44
ERBB3-208ENST00000549205 IGDCC3Q8IVU1 814 aa12.31□□□□□ -0.44
ERBB3-208ENST00000549205 MPP5Q8N3R9 675 aa12.31□□□□□ -0.44
ERBB3-208ENST00000549205 MREGQ8N565 214 aa12.31□□□□□ -0.44
ERBB3-208ENST00000549205 TXNDC5Q8NBS9 432 aaKnown RBP12.31□□□□□ -0.44
ERBB3-208ENST00000549205 PYROXD1Q8WU10 500 aa12.31□□□□□ -0.44
ERBB3-208ENST00000549205 PIH1D2Q8WWB5 315 aa12.31□□□□□ -0.44
ERBB3-208ENST00000549205 ANKRD7Q92527 254 aa12.31□□□□□ -0.44
ERBB3-208ENST00000549205 KLHL32Q96NJ5 620 aa12.31□□□□□ -0.44
ERBB3-208ENST00000549205 FBRSQ9HAH7 460 aa12.31□□□□□ -0.44
ERBB3-208ENST00000549205 ARFGAP3Q9NP61 516 aa12.31□□□□□ -0.44
ERBB3-208ENST00000549205 CD320Q9NPF0 282 aa12.31□□□□□ -0.44
ERBB3-208ENST00000549205 NINJ2Q9NZG7 142 aa12.31□□□□□ -0.44
ERBB3-208ENST00000549205 DKK3Q9UBP4 350 aa12.31□□□□□ -0.44
ERBB3-208ENST00000549205 MUTYHQ9UIF7 546 aa12.31□□□□□ -0.44
ERBB3-208ENST00000549205 PPM1HQ9ULR3 514 aa12.31□□□□□ -0.44
ERBB3-208ENST00000549205 CHMP2BQ9UQN3 213 aa12.31□□□□□ -0.44
ERBB3-208ENST00000549205 MAD1L1Q9Y6D9 718 aa12.31□□□□□ -0.44
ERBB3-208ENST00000549205 WDR87Q6ZQQ6 2873 aa12.31□□□□□ -0.44
ERBB3-208ENST00000549205 A0A0J9YYE9 177 aa12.3□□□□□ -0.44
ERBB3-208ENST00000549205 KANSL1LA0AUZ9 987 aa12.3□□□□□ -0.44
ERBB3-208ENST00000549205 SYNCRIPO60506 623 aaKnown RBP12.3□□□□□ -0.44
ERBB3-208ENST00000549205 TRBC1P01850 177 aa12.3□□□□□ -0.44
ERBB3-208ENST00000549205 CHRNB1P11230 501 aa12.3□□□□□ -0.44
ERBB3-208ENST00000549205 HOXB2P14652 356 aa12.3□□□□□ -0.44
ERBB3-208ENST00000549205 TARSP26639 723 aaKnown RBP12.3□□□□□ -0.44
ERBB3-208ENST00000549205 ELK3P41970 407 aa12.3□□□□□ -0.44
ERBB3-208ENST00000549205 PMS2P54278 862 aa12.3□□□□□ -0.44
ERBB3-208ENST00000549205 LRRC32Q14392 662 aa12.3□□□□□ -0.44
ERBB3-208ENST00000549205 POU6F1Q14863 301 aa12.3□□□□□ -0.44
ERBB3-208ENST00000549205 HP1BP3Q5SSJ5 553 aaPredicted RBP12.3□□□□□ -0.44
ERBB3-208ENST00000549205 CASC4Q6P4E1 433 aa12.3□□□□□ -0.44
ERBB3-208ENST00000549205 BRAT1Q6PJG6 821 aa12.3□□□□□ -0.44
ERBB3-208ENST00000549205 ZSWIM9Q86XI8 627 aa12.3□□□□□ -0.44
ERBB3-208ENST00000549205 SIX5Q8N196 739 aa12.3□□□□□ -0.44
ERBB3-208ENST00000549205 SYNPOQ8N3V7 929 aa12.3□□□□□ -0.44
ERBB3-208ENST00000549205 PAF1Q8N7H5 531 aa12.3□□□□□ -0.44
ERBB3-208ENST00000549205 FBXO36Q8NEA4 188 aa12.3□□□□□ -0.44
ERBB3-208ENST00000549205 RPLP0P6Q8NHW5 317 aa12.3□□□□□ -0.44
ERBB3-208ENST00000549205 PIP4K2CQ8TBX8 421 aa12.3□□□□□ -0.44
ERBB3-208ENST00000549205 HCAR2Q8TDS4 363 aa12.3□□□□□ -0.44
ERBB3-208ENST00000549205 PTCD2Q8WV60 388 aaKnown RBP12.3□□□□□ -0.44
ERBB3-208ENST00000549205 STAMBPL1Q96FJ0 436 aa12.3□□□□□ -0.44
ERBB3-208ENST00000549205 TTC25Q96NG3 672 aa12.3□□□□□ -0.44
ERBB3-208ENST00000549205 RANBP9Q96S59 729 aa12.3□□□□□ -0.44
ERBB3-208ENST00000549205 NELL2Q99435 816 aa12.3□□□□□ -0.44
ERBB3-208ENST00000549205 EBNA1BP2Q99848 306 aaKnown RBP12.3□□□□□ -0.44
ERBB3-208ENST00000549205 NAT9Q9BTE0 207 aa12.3□□□□□ -0.44
ERBB3-208ENST00000549205 RSPH9Q9H1X1 276 aaPredicted RBP12.3□□□□□ -0.44
ERBB3-208ENST00000549205 CDC42EP4Q9H3Q1 356 aaKnown RBP12.3□□□□□ -0.44
ERBB3-208ENST00000549205 SEMA4AQ9H3S1 761 aa12.3□□□□□ -0.44
ERBB3-208ENST00000549205 LTB4R2Q9NPC1 389 aa12.3□□□□□ -0.44
ERBB3-208ENST00000549205 SAMD15Q9P1V8 674 aa12.3□□□□□ -0.44
ERBB3-208ENST00000549205 SARDHQ9UL12 918 aa12.3□□□□□ -0.44
ERBB3-208ENST00000549205 PHTF1Q9UMS5 762 aa12.3□□□□□ -0.44
ERBB3-208ENST00000549205 PPIL1Q9Y3C6 166 aa12.3□□□□□ -0.44
ERBB3-208ENST00000549205 KNL1Q8NG31 2342 aa12.29□□□□□ -0.44
ERBB3-208ENST00000549205 MAGEB16A2A368 324 aa12.29□□□□□ -0.44
ERBB3-208ENST00000549205 C1QTNF3-AMACRE9PGA6 284 aa12.29□□□□□ -0.44
ERBB3-208ENST00000549205 KPNA3O00505 521 aaPredicted RBP12.29□□□□□ -0.44
ERBB3-208ENST00000549205 TTC4O95801 387 aa12.29□□□□□ -0.44
ERBB3-208ENST00000549205 PIRTP0C851 137 aa12.29□□□□□ -0.44
ERBB3-208ENST00000549205 PGAM1P18669 254 aa12.29□□□□□ -0.44
ERBB3-208ENST00000549205 ADRA1DP25100 572 aa12.29□□□□□ -0.44
ERBB3-208ENST00000549205 ITGB7P26010 798 aa12.29□□□□□ -0.44
ERBB3-208ENST00000549205 SLC8A1P32418 973 aa12.29□□□□□ -0.44
ERBB3-208ENST00000549205 POLR2LP62875 67 aaKnown RBP12.29□□□□□ -0.44
ERBB3-208ENST00000549205 KYNUQ16719 465 aa12.29□□□□□ -0.44
ERBB3-208ENST00000549205 PCID2Q5JVF3 399 aa12.29□□□□□ -0.44
ERBB3-208ENST00000549205 SPDYCQ5MJ68 293 aa12.29□□□□□ -0.44
ERBB3-208ENST00000549205 EOGTQ5NDL2 527 aa12.29□□□□□ -0.44
ERBB3-208ENST00000549205 DENND2CQ68D51 928 aa12.29□□□□□ -0.44
ERBB3-208ENST00000549205 KIAA1211LQ6NV74 962 aa12.29□□□□□ -0.44
ERBB3-208ENST00000549205 CCNJLQ8IV13 435 aa12.29□□□□□ -0.44
ERBB3-208ENST00000549205 NDUFAF2Q8N183 169 aa12.29□□□□□ -0.44
ERBB3-208ENST00000549205 PPHLN1Q8NEY8 458 aaKnown RBP12.29□□□□□ -0.44
ERBB3-208ENST00000549205 OR2T3Q8NH03 318 aa12.29□□□□□ -0.44
ERBB3-208ENST00000549205 BLOC1S5Q8TDH9 187 aa12.29□□□□□ -0.44
ERBB3-208ENST00000549205 C9orf72Q96LT7 481 aa12.29□□□□□ -0.44
ERBB3-208ENST00000549205 SMIM14Q96QK8 99 aa12.29□□□□□ -0.44
ERBB3-208ENST00000549205 MCCC1Q96RQ3 725 aaPredicted RBP12.29□□□□□ -0.44
ERBB3-208ENST00000549205 KIFC1Q9BW19 673 aa12.29□□□□□ -0.44
ERBB3-208ENST00000549205 PABPC3Q9H361 631 aaKnown RBP12.29□□□□□ -0.44
ERBB3-208ENST00000549205 MRM3Q9HC36 420 aaKnown RBP12.29□□□□□ -0.44
ERBB3-208ENST00000549205 CD248Q9HCU0 757 aa12.29□□□□□ -0.44
ERBB3-208ENST00000549205 HACD3Q9P035 362 aa12.29□□□□□ -0.44
ERBB3-208ENST00000549205 ZC3H7BQ9UGR2 993 aaKnown RBP12.29□□□□□ -0.44
ERBB3-208ENST00000549205 MMP17Q9ULZ9 603 aa12.29□□□□□ -0.44
ERBB3-208ENST00000549205 SOX13Q9UN79 622 aa12.29□□□□□ -0.44
ERBB3-208ENST00000549205 TCAF1Q9Y4C2 921 aa12.29□□□□□ -0.44
ERBB3-208ENST00000549205 SPO11Q9Y5K1 396 aa12.29□□□□□ -0.44
ERBB3-208ENST00000549205 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.29□□□□□ -0.44
ERBB3-208ENST00000549205 PLXNA2O75051 1894 aa12.28□□□□□ -0.44
ERBB3-208ENST00000549205 FAM237BA0A1B0GVD1 139 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms