RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 GULP1Q9UBP9 304 aa8.58□□□□□ -1.04
TROAP-208ENST00000548817 OR12D3Q9UGF7 316 aa8.58□□□□□ -1.04
TROAP-208ENST00000548817 APOBEC3BQ9UH17 382 aaKnown RBP8.58□□□□□ -1.04
TROAP-208ENST00000548817 PADI4Q9UM07 663 aa8.58□□□□□ -1.04
TROAP-208ENST00000548817 ZSCAN5CA6NGD5 496 aaPredicted RBP8.57□□□□□ -1.04
TROAP-208ENST00000548817 PRR19A6NJB7 356 aa8.57□□□□□ -1.04
TROAP-208ENST00000548817 TMEM110-MUSTN1A8MSY1 372 aa8.57□□□□□ -1.04
TROAP-208ENST00000548817 C9orf172C9J069 976 aa8.57□□□□□ -1.04
TROAP-208ENST00000548817 BUB1O43683 1085 aa8.57□□□□□ -1.04
TROAP-208ENST00000548817 RAMP2O60895 175 aa8.57□□□□□ -1.04
TROAP-208ENST00000548817 ZMPSTE24O75844 475 aa8.57□□□□□ -1.04
TROAP-208ENST00000548817 TM7SF2O76062 418 aa8.57□□□□□ -1.04
TROAP-208ENST00000548817 IGSF6O95976 241 aa8.57□□□□□ -1.04
TROAP-208ENST00000548817 PRKCGP05129 697 aa8.57□□□□□ -1.04
TROAP-208ENST00000548817 UGT2B4P06133 528 aa8.57□□□□□ -1.04
TROAP-208ENST00000548817 TPM2P07951 284 aa8.57□□□□□ -1.04
TROAP-208ENST00000548817 ALPIP09923 528 aa8.57□□□□□ -1.04
TROAP-208ENST00000548817 PNMA6AP0CW24 399 aaPredicted RBP8.57□□□□□ -1.04
TROAP-208ENST00000548817 RHOQP17081 205 aa8.57□□□□□ -1.04
TROAP-208ENST00000548817 SDC4P31431 198 aa8.57□□□□□ -1.04
TROAP-208ENST00000548817 CDH5P33151 784 aaPredicted RBP8.57□□□□□ -1.04
TROAP-208ENST00000548817 FLT3P36888 993 aa8.57□□□□□ -1.04
TROAP-208ENST00000548817 UQCRFS1P47985 274 aa8.57□□□□□ -1.04
TROAP-208ENST00000548817 ARF5P84085 180 aa8.57□□□□□ -1.04
TROAP-208ENST00000548817 PPARDQ03181 441 aa8.57□□□□□ -1.04
TROAP-208ENST00000548817 SEPT6Q14141 434 aa8.57□□□□□ -1.04
TROAP-208ENST00000548817 ELOCQ15369 112 aa8.57□□□□□ -1.04
TROAP-208ENST00000548817 CDO1Q16878 200 aa8.57□□□□□ -1.04
TROAP-208ENST00000548817 MYLK3Q32MK0 819 aa8.57□□□□□ -1.04
TROAP-208ENST00000548817 VWA3BQ502W6 1294 aa8.57□□□□□ -1.04
TROAP-208ENST00000548817 GDPD4Q6W3E5 623 aa8.57□□□□□ -1.04
TROAP-208ENST00000548817 SRRM1Q8IYB3 904 aaKnown RBP8.57□□□□□ -1.04
TROAP-208ENST00000548817 PHACTR4Q8IZ21 702 aa8.57□□□□□ -1.04
TROAP-208ENST00000548817 FSTL5Q8N475 847 aaPredicted RBP8.57□□□□□ -1.04
TROAP-208ENST00000548817 TEX19Q8NA77 164 aa8.57□□□□□ -1.04
TROAP-208ENST00000548817 OR2AP1Q8NGE2 309 aa8.57□□□□□ -1.04
TROAP-208ENST00000548817 OR6K2Q8NGY2 324 aa8.57□□□□□ -1.04
TROAP-208ENST00000548817 ATL2Q8NHH9 583 aa8.57□□□□□ -1.04
TROAP-208ENST00000548817 CPA5Q8WXQ8 436 aa8.57□□□□□ -1.04
TROAP-208ENST00000548817 USP7Q93009 1102 aa8.57□□□□□ -1.04
TROAP-208ENST00000548817 TBC1D31Q96DN5 1066 aa8.57□□□□□ -1.04
TROAP-208ENST00000548817 ABHD17AQ96GS6 310 aa8.57□□□□□ -1.04
TROAP-208ENST00000548817 CFAP57Q96MR6 1250 aa8.57□□□□□ -1.04
TROAP-208ENST00000548817 GDAP1L1Q96MZ0 367 aa8.57□□□□□ -1.04
TROAP-208ENST00000548817 KLHL32Q96NJ5 620 aa8.57□□□□□ -1.04
TROAP-208ENST00000548817 TUBGCP2Q9BSJ2 902 aa8.57□□□□□ -1.04
TROAP-208ENST00000548817 SIX2Q9NPC8 291 aa8.57□□□□□ -1.04
TROAP-208ENST00000548817 ANLNQ9NQW6 1124 aa8.57□□□□□ -1.04
TROAP-208ENST00000548817 FOXJ2Q9P0K8 574 aa8.57□□□□□ -1.04
TROAP-208ENST00000548817 DNAI1Q9UI46 699 aa8.57□□□□□ -1.04
TROAP-208ENST00000548817 FAM170AA1A519 330 aa8.56□□□□□ -1.04
TROAP-208ENST00000548817 ANKRD62A6NC57 917 aa8.56□□□□□ -1.04
TROAP-208ENST00000548817 WIPF3A6NGB9 483 aa8.56□□□□□ -1.04
TROAP-208ENST00000548817 I6L893 689 aaPredicted RBP8.56□□□□□ -1.04
TROAP-208ENST00000548817 RNF103O00237 685 aa8.56□□□□□ -1.04
TROAP-208ENST00000548817 MMP20O60882 483 aa8.56□□□□□ -1.04
TROAP-208ENST00000548817 ZNF821O75541 412 aaPredicted RBP8.56□□□□□ -1.04
TROAP-208ENST00000548817 DESP17661 470 aa8.56□□□□□ -1.04
TROAP-208ENST00000548817 ITIH1P19827 911 aa8.56□□□□□ -1.04
TROAP-208ENST00000548817 GNLYP22749 145 aa8.56□□□□□ -1.04
TROAP-208ENST00000548817 HTR1BP28222 390 aa8.56□□□□□ -1.04
TROAP-208ENST00000548817 GRNP28799 593 aaKnown RBP8.56□□□□□ -1.04
TROAP-208ENST00000548817 GKP32189 559 aa8.56□□□□□ -1.04
TROAP-208ENST00000548817 ADRA1BP35368 520 aa8.56□□□□□ -1.04
TROAP-208ENST00000548817 ACVRL1P37023 503 aa8.56□□□□□ -1.04
TROAP-208ENST00000548817 EIF4A3P38919 411 aaKnown RBP8.56□□□□□ -1.04
TROAP-208ENST00000548817 SUOXP51687 545 aa8.56□□□□□ -1.04
TROAP-208ENST00000548817 MLLT10P55197 1068 aa8.56□□□□□ -1.04
TROAP-208ENST00000548817 PFN3P60673 137 aa8.56□□□□□ -1.04
TROAP-208ENST00000548817 RHOAP61586 193 aa8.56□□□□□ -1.04
TROAP-208ENST00000548817 NRG1Q02297 640 aaPredicted RBP8.56□□□□□ -1.04
TROAP-208ENST00000548817 ZFP36L1Q07352 338 aaKnown RBP8.56□□□□□ -1.04
TROAP-208ENST00000548817 EIF2B5Q13144 721 aaKnown RBP8.56□□□□□ -1.04
TROAP-208ENST00000548817 C1orf61Q13536 156 aa8.56□□□□□ -1.04
TROAP-208ENST00000548817 C2CD6Q53TS8 623 aa8.56□□□□□ -1.04
TROAP-208ENST00000548817 CFAP58Q5T655 872 aa8.56□□□□□ -1.04
TROAP-208ENST00000548817 KLHDC7AQ5VTJ3 777 aa8.56□□□□□ -1.04
TROAP-208ENST00000548817 C1QL3Q5VWW1 255 aa8.56□□□□□ -1.04
TROAP-208ENST00000548817 NAA35Q5VZE5 725 aa8.56□□□□□ -1.04
TROAP-208ENST00000548817 LVRNQ6Q4G3 990 aa8.56□□□□□ -1.04
TROAP-208ENST00000548817 ARCQ7LC44 396 aa8.56□□□□□ -1.04
TROAP-208ENST00000548817 GKN2Q86XP6 184 aa8.56□□□□□ -1.04
TROAP-208ENST00000548817 ZNF677Q86XU0 584 aa8.56□□□□□ -1.04
TROAP-208ENST00000548817 IRF2BP1Q8IU81 584 aa8.56□□□□□ -1.04
TROAP-208ENST00000548817 IL22RA1Q8N6P7 574 aa8.56□□□□□ -1.04
TROAP-208ENST00000548817 PAF1Q8N7H5 531 aa8.56□□□□□ -1.04
TROAP-208ENST00000548817 ARL10Q8N8L6 244 aa8.56□□□□□ -1.04
TROAP-208ENST00000548817 APOBEC4Q8WW27 367 aaKnown RBP8.56□□□□□ -1.04
TROAP-208ENST00000548817 CASKIN2Q8WXE0 1202 aa8.56□□□□□ -1.04
TROAP-208ENST00000548817 ARHGEF2Q92974 986 aaKnown RBP8.56□□□□□ -1.04
TROAP-208ENST00000548817 NKD1Q969G9 470 aa8.56□□□□□ -1.04
TROAP-208ENST00000548817 SLC45A3Q96JT2 553 aa8.56□□□□□ -1.04
TROAP-208ENST00000548817 KLF6Q99612 283 aaPredicted RBP8.56□□□□□ -1.04
TROAP-208ENST00000548817 NCAPGQ9BPX3 1015 aa8.56□□□□□ -1.04
TROAP-208ENST00000548817 STK33Q9BYT3 514 aa8.56□□□□□ -1.04
TROAP-208ENST00000548817 FOXP3Q9BZS1 431 aa8.56□□□□□ -1.04
TROAP-208ENST00000548817 PRDM8Q9NQV8 689 aa8.56□□□□□ -1.04
TROAP-208ENST00000548817 METTL5Q9NRN9 209 aaKnown RBP8.56□□□□□ -1.04
TROAP-208ENST00000548817 DONSONQ9NYP3 566 aa8.56□□□□□ -1.04
TROAP-208ENST00000548817 AKAP7Q9P0M2 348 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms