RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 MFSD1Q9H3U5 465 aa18.64■□□□□ 0.57
PRPF40B-208ENST00000548436 ZNF385DQ9H6B1 395 aa18.64■□□□□ 0.57
PRPF40B-208ENST00000548436 EIF4E1BA6NMX2 242 aaKnown RBP18.64■□□□□ 0.57
PRPF40B-208ENST00000548436 SLCO1B7G3V0H7 640 aa18.64■□□□□ 0.57
PRPF40B-208ENST00000548436 PRAMEF11O60813 436 aa18.64■□□□□ 0.57
PRPF40B-208ENST00000548436 S1PR4O95977 384 aa18.64■□□□□ 0.57
PRPF40B-208ENST00000548436 CCDC166P0CW27 439 aa18.64■□□□□ 0.57
PRPF40B-208ENST00000548436 ATF6P18850 670 aa18.64■□□□□ 0.57
PRPF40B-208ENST00000548436 KPNA2P52292 529 aaKnown RBP18.64■□□□□ 0.57
PRPF40B-208ENST00000548436 YBEYP58557 167 aaPredicted RBP18.64■□□□□ 0.57
PRPF40B-208ENST00000548436 AP2B1P63010 937 aa18.64■□□□□ 0.57
PRPF40B-208ENST00000548436 SLC14A2Q15849 920 aa18.64■□□□□ 0.57
PRPF40B-208ENST00000548436 ANO7Q6IWH7 933 aa18.64■□□□□ 0.57
PRPF40B-208ENST00000548436 PRSS55Q6UWB4 352 aaPredicted RBP18.64■□□□□ 0.57
PRPF40B-208ENST00000548436 ACAD11Q709F0 780 aa18.64■□□□□ 0.57
PRPF40B-208ENST00000548436 GALNT7Q86SF2 657 aa18.64■□□□□ 0.57
PRPF40B-208ENST00000548436 KBTBD2Q8IY47 623 aa18.64■□□□□ 0.57
PRPF40B-208ENST00000548436 ANKRD49Q8WVL7 239 aa18.64■□□□□ 0.57
PRPF40B-208ENST00000548436 UBXN10Q96LJ8 280 aa18.64■□□□□ 0.57
PRPF40B-208ENST00000548436 TTC1Q99614 292 aa18.64■□□□□ 0.57
PRPF40B-208ENST00000548436 SUDS3Q9H7L9 328 aaPredicted RBP18.64■□□□□ 0.57
PRPF40B-208ENST00000548436 NCKIPSDQ9NZQ3 722 aa18.64■□□□□ 0.57
PRPF40B-208ENST00000548436 CDYLQ9Y232 598 aa18.64■□□□□ 0.57
PRPF40B-208ENST00000548436 MTF2Q9Y483 593 aaPredicted RBP18.64■□□□□ 0.57
PRPF40B-208ENST00000548436 A0A0D9SEW6 157 aa18.63■□□□□ 0.57
PRPF40B-208ENST00000548436 SLC38A8A6NNN8 435 aa18.63■□□□□ 0.57
PRPF40B-208ENST00000548436 INHAP05111 366 aa18.63■□□□□ 0.57
PRPF40B-208ENST00000548436 GALTP07902 379 aa18.63■□□□□ 0.57
PRPF40B-208ENST00000548436 LTA4HP09960 611 aaKnown RBP18.63■□□□□ 0.57
PRPF40B-208ENST00000548436 HNRNPLP14866 589 aaKnown RBP eCLIP18.63■□□□□ 0.57
PRPF40B-208ENST00000548436 HOXD10P28358 340 aa18.63■□□□□ 0.57
PRPF40B-208ENST00000548436 SLC6A4P31645 630 aa18.63■□□□□ 0.57
PRPF40B-208ENST00000548436 MAPKAPK2P49137 400 aa18.63■□□□□ 0.57
PRPF40B-208ENST00000548436 APLP1P51693 650 aa18.63■□□□□ 0.57
PRPF40B-208ENST00000548436 CDKN2DP55273 166 aa18.63■□□□□ 0.57
PRPF40B-208ENST00000548436 PRAMEP78395 509 aa18.63■□□□□ 0.57
PRPF40B-208ENST00000548436 PFKPQ01813 784 aa18.63■□□□□ 0.57
PRPF40B-208ENST00000548436 TBL3Q12788 808 aaKnown RBP18.63■□□□□ 0.57
PRPF40B-208ENST00000548436 NOGQ13253 232 aa18.63■□□□□ 0.57
PRPF40B-208ENST00000548436 BLMHQ13867 455 aa18.63■□□□□ 0.57
PRPF40B-208ENST00000548436 CCNIQ14094 377 aa18.63■□□□□ 0.57
PRPF40B-208ENST00000548436 PTPRCAPQ14761 206 aa18.63■□□□□ 0.57
PRPF40B-208ENST00000548436 AGAP9Q5VTM2 703 aa18.63■□□□□ 0.57
PRPF40B-208ENST00000548436 TMEM207Q6UWW9 146 aa18.63■□□□□ 0.57
PRPF40B-208ENST00000548436 PIWIL4Q7Z3Z4 852 aaKnown RBP18.63■□□□□ 0.57
PRPF40B-208ENST00000548436 HPS6Q86YV9 775 aa18.63■□□□□ 0.57
PRPF40B-208ENST00000548436 LGI2Q8N0V4 545 aa18.63■□□□□ 0.57
PRPF40B-208ENST00000548436 CPSF7Q8N684 471 aaKnown RBP18.63■□□□□ 0.57
PRPF40B-208ENST00000548436 SH3RF2Q8TEC5 729 aa18.63■□□□□ 0.57
PRPF40B-208ENST00000548436 BCL7CQ8WUZ0 217 aaPredicted RBP18.63■□□□□ 0.57
PRPF40B-208ENST00000548436 CCDC124Q96CT7 223 aaKnown RBP18.63■□□□□ 0.57
PRPF40B-208ENST00000548436 POLR1EQ9GZS1 481 aaKnown RBP18.63■□□□□ 0.57
PRPF40B-208ENST00000548436 PDFQ9HBH1 243 aa18.63■□□□□ 0.57
PRPF40B-208ENST00000548436 CYP4F12Q9HCS2 524 aa18.63■□□□□ 0.57
PRPF40B-208ENST00000548436 VWA7Q9Y334 891 aa18.63■□□□□ 0.57
PRPF40B-208ENST00000548436 ACTL7AQ9Y615 435 aa18.63■□□□□ 0.57
PRPF40B-208ENST00000548436 SH2D4BQ5SQS7 431 aa18.62■□□□□ 0.57
PRPF40B-208ENST00000548436 NXNQ6DKJ4 435 aa18.62■□□□□ 0.57
PRPF40B-208ENST00000548436 SNX32Q86XE0 403 aa18.62■□□□□ 0.57
PRPF40B-208ENST00000548436 GABPB2Q8TAK5 448 aaPredicted RBP18.62■□□□□ 0.57
PRPF40B-208ENST00000548436 STON2Q8WXE9 905 aa18.62■□□□□ 0.57
PRPF40B-208ENST00000548436 TBATAQ96M53 351 aa18.62■□□□□ 0.57
PRPF40B-208ENST00000548436 CATSPER2Q96P56 530 aa18.62■□□□□ 0.57
PRPF40B-208ENST00000548436 CCDC28BQ9BUN5 200 aa18.62■□□□□ 0.57
PRPF40B-208ENST00000548436 COMMD8Q9NX08 183 aa18.62■□□□□ 0.57
PRPF40B-208ENST00000548436 ARL5AQ9Y689 179 aa18.62■□□□□ 0.57
PRPF40B-208ENST00000548436 RGSL1A5PLK6 1076 aa18.62■□□□□ 0.57
PRPF40B-208ENST00000548436 A8MT66 165 aa18.62■□□□□ 0.57
PRPF40B-208ENST00000548436 ADAM12O43184 909 aa18.62■□□□□ 0.57
PRPF40B-208ENST00000548436 BUD23O43709 281 aaKnown RBP18.62■□□□□ 0.57
PRPF40B-208ENST00000548436 FKBP6O75344 327 aa18.62■□□□□ 0.57
PRPF40B-208ENST00000548436 WISP3O95389 354 aaPredicted RBP18.62■□□□□ 0.57
PRPF40B-208ENST00000548436 THRAP10827 490 aa18.62■□□□□ 0.57
PRPF40B-208ENST00000548436 PPARGP37231 505 aaPredicted RBP18.62■□□□□ 0.57
PRPF40B-208ENST00000548436 GALNT3Q14435 633 aa18.62■□□□□ 0.57
PRPF40B-208ENST00000548436 ACBD5Q5T8D3 534 aaPredicted RBP18.62■□□□□ 0.57
PRPF40B-208ENST00000548436 RPS27LQ71UM5 84 aaKnown RBP18.62■□□□□ 0.57
PRPF40B-208ENST00000548436 FBXW8Q8N3Y1 598 aa18.62■□□□□ 0.57
PRPF40B-208ENST00000548436 PPFIBP2Q8ND30 876 aa18.62■□□□□ 0.57
PRPF40B-208ENST00000548436 OR52K2Q8NGK3 314 aa18.62■□□□□ 0.57
PRPF40B-208ENST00000548436 PXYLP1Q8TE99 480 aa18.62■□□□□ 0.57
PRPF40B-208ENST00000548436 PYDC1Q8WXC3 89 aa18.62■□□□□ 0.57
PRPF40B-208ENST00000548436 IFT43Q96FT9 208 aa18.62■□□□□ 0.57
PRPF40B-208ENST00000548436 TSPAN17Q96FV3 270 aa18.62■□□□□ 0.57
PRPF40B-208ENST00000548436 MARK4Q96L34 752 aa18.62■□□□□ 0.57
PRPF40B-208ENST00000548436 S100A14Q9HCY8 104 aa18.62■□□□□ 0.57
PRPF40B-208ENST00000548436 LRFN2Q9ULH4 789 aa18.62■□□□□ 0.57
PRPF40B-208ENST00000548436 POMPQ9Y244 141 aa18.62■□□□□ 0.57
PRPF40B-208ENST00000548436 F5H5T6 163 aa18.61■□□□□ 0.57
PRPF40B-208ENST00000548436 AIM2O14862 343 aa18.61■□□□□ 0.57
PRPF40B-208ENST00000548436 MAP3K7O43318 606 aa18.61■□□□□ 0.57
PRPF40B-208ENST00000548436 BAG2O95816 211 aa18.61■□□□□ 0.57
PRPF40B-208ENST00000548436 PDHA1P08559 390 aa18.61■□□□□ 0.57
PRPF40B-208ENST00000548436 ACVR1Q04771 509 aa18.61■□□□□ 0.57
PRPF40B-208ENST00000548436 ZNF235Q14590 738 aa18.61■□□□□ 0.57
PRPF40B-208ENST00000548436 TCHHL1Q5QJ38 904 aaPredicted RBP18.61■□□□□ 0.57
PRPF40B-208ENST00000548436 AAGABQ6PD74 315 aa18.61■□□□□ 0.57
PRPF40B-208ENST00000548436 PIM3Q86V86 326 aa18.61■□□□□ 0.57
PRPF40B-208ENST00000548436 CRIPAKQ8N1N5 446 aa18.61■□□□□ 0.57
PRPF40B-208ENST00000548436 BLOC1S5Q8TDH9 187 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms