RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 CRADDP78560 199 aa28.95■■■□□ 2.22
BRF1-213ENST00000548421 LRRC32Q14392 662 aa28.95■■■□□ 2.22
BRF1-213ENST00000548421 QPCTQ16769 361 aa28.95■■■□□ 2.22
BRF1-213ENST00000548421 ZNF805Q5CZA5 627 aa28.95■■■□□ 2.22
BRF1-213ENST00000548421 CASC4Q6P4E1 433 aa28.95■■■□□ 2.22
BRF1-213ENST00000548421 ANKMY2Q8IV38 441 aa28.95■■■□□ 2.22
BRF1-213ENST00000548421 HCAR2Q8TDS4 363 aa28.95■■■□□ 2.22
BRF1-213ENST00000548421 PYROXD1Q8WU10 500 aa28.95■■■□□ 2.22
BRF1-213ENST00000548421 ANKRD7Q92527 254 aa28.95■■■□□ 2.22
BRF1-213ENST00000548421 CDC42EP4Q9H3Q1 356 aaKnown RBP28.95■■■□□ 2.22
BRF1-213ENST00000548421 LTB4R2Q9NPC1 389 aa28.95■■■□□ 2.22
BRF1-213ENST00000548421 SAMD15Q9P1V8 674 aa28.95■■■□□ 2.22
BRF1-213ENST00000548421 PHTF1Q9UMS5 762 aa28.95■■■□□ 2.22
BRF1-213ENST00000548421 CHMP2BQ9UQN3 213 aa28.95■■■□□ 2.22
BRF1-213ENST00000548421 MAD1L1Q9Y6D9 718 aa28.95■■■□□ 2.22
BRF1-213ENST00000548421 TSPAN11A1L157 253 aa28.94■■■□□ 2.22
BRF1-213ENST00000548421 TARSP26639 723 aaKnown RBP28.94■■■□□ 2.22
BRF1-213ENST00000548421 POU6F1Q14863 301 aa28.94■■■□□ 2.22
BRF1-213ENST00000548421 DENND2CQ68D51 928 aa28.94■■■□□ 2.22
BRF1-213ENST00000548421 TRMT10CQ7L0Y3 403 aaKnown RBP28.94■■■□□ 2.22
BRF1-213ENST00000548421 ZSWIM9Q86XI8 627 aa28.94■■■□□ 2.22
BRF1-213ENST00000548421 SYNPOQ8N3V7 929 aa28.94■■■□□ 2.22
BRF1-213ENST00000548421 PIP4K2CQ8TBX8 421 aa28.94■■■□□ 2.22
BRF1-213ENST00000548421 STAMBPL1Q96FJ0 436 aa28.94■■■□□ 2.22
BRF1-213ENST00000548421 C9orf72Q96LT7 481 aa28.94■■■□□ 2.22
BRF1-213ENST00000548421 NELL2Q99435 816 aa28.94■■■□□ 2.22
BRF1-213ENST00000548421 EBNA1BP2Q99848 306 aaKnown RBP28.94■■■□□ 2.22
BRF1-213ENST00000548421 DKK3Q9UBP4 350 aa28.94■■■□□ 2.22
BRF1-213ENST00000548421 SARDHQ9UL12 918 aa28.94■■■□□ 2.22
BRF1-213ENST00000548421 IL1BP01584 269 aa28.93■■■□□ 2.22
BRF1-213ENST00000548421 POLR2LP62875 67 aaKnown RBP28.93■■■□□ 2.22
BRF1-213ENST00000548421 MSLNQ13421 630 aaPredicted RBP28.93■■■□□ 2.22
BRF1-213ENST00000548421 UBXN2BQ14CS0 331 aa28.93■■■□□ 2.22
BRF1-213ENST00000548421 EOGTQ5NDL2 527 aa28.93■■■□□ 2.22
BRF1-213ENST00000548421 ARMC3Q5W041 872 aa28.93■■■□□ 2.22
BRF1-213ENST00000548421 IGDCC3Q8IVU1 814 aa28.93■■■□□ 2.22
BRF1-213ENST00000548421 NDUFAF2Q8N183 169 aa28.93■■■□□ 2.22
BRF1-213ENST00000548421 MREGQ8N565 214 aa28.93■■■□□ 2.22
BRF1-213ENST00000548421 TTC25Q96NG3 672 aa28.93■■■□□ 2.22
BRF1-213ENST00000548421 NAT9Q9BTE0 207 aa28.93■■■□□ 2.22
BRF1-213ENST00000548421 SEMA4AQ9H3S1 761 aa28.93■■■□□ 2.22
BRF1-213ENST00000548421 FBRSQ9HAH7 460 aa28.93■■■□□ 2.22
BRF1-213ENST00000548421 MAGEB16A2A368 324 aa28.92■■■□□ 2.22
BRF1-213ENST00000548421 C1QTNF3-AMACRE9PGA6 284 aa28.92■■■□□ 2.22
BRF1-213ENST00000548421 KPNA3O00505 521 aaPredicted RBP28.92■■■□□ 2.22
BRF1-213ENST00000548421 RNASEH1O60930 286 aaKnown RBP28.92■■■□□ 2.22
BRF1-213ENST00000548421 SLC8A1P32418 973 aa28.92■■■□□ 2.22
BRF1-213ENST00000548421 PCID2Q5JVF3 399 aa28.92■■■□□ 2.22
BRF1-213ENST00000548421 CCNJLQ8IV13 435 aa28.92■■■□□ 2.22
BRF1-213ENST00000548421 MMAAQ8IVH4 418 aaKnown RBP28.92■■■□□ 2.22
BRF1-213ENST00000548421 PPHLN1Q8NEY8 458 aaKnown RBP28.92■■■□□ 2.22
BRF1-213ENST00000548421 BLOC1S5Q8TDH9 187 aa28.92■■■□□ 2.22
BRF1-213ENST00000548421 PTCD2Q8WV60 388 aaKnown RBP28.92■■■□□ 2.22
BRF1-213ENST00000548421 PPP1R16AQ96I34 528 aa28.92■■■□□ 2.22
BRF1-213ENST00000548421 RANBP9Q96S59 729 aa28.92■■■□□ 2.22
BRF1-213ENST00000548421 RSPH9Q9H1X1 276 aaPredicted RBP28.92■■■□□ 2.22
BRF1-213ENST00000548421 NINJ2Q9NZG7 142 aa28.92■■■□□ 2.22
BRF1-213ENST00000548421 A0A0J9YYE9 177 aa28.91■■■□□ 2.22
BRF1-213ENST00000548421 TRBC1P01850 177 aa28.91■■■□□ 2.22
BRF1-213ENST00000548421 ADRA1DP25100 572 aa28.91■■■□□ 2.22
BRF1-213ENST00000548421 FAM46CQ5VWP2 391 aa28.91■■■□□ 2.22
BRF1-213ENST00000548421 OR2T3Q8NH03 318 aa28.91■■■□□ 2.22
BRF1-213ENST00000548421 ERLEC1Q96DZ1 483 aa28.91■■■□□ 2.22
BRF1-213ENST00000548421 LMAN1LQ9HAT1 526 aa28.91■■■□□ 2.22
BRF1-213ENST00000548421 ZC3H7BQ9UGR2 993 aaKnown RBP28.91■■■□□ 2.22
BRF1-213ENST00000548421 MMP17Q9ULZ9 603 aa28.91■■■□□ 2.22
BRF1-213ENST00000548421 SOX13Q9UN79 622 aa28.91■■■□□ 2.22
BRF1-213ENST00000548421 PPIL1Q9Y3C6 166 aa28.91■■■□□ 2.22
BRF1-213ENST00000548421 VCANP13611 3396 aa28.91■■■□□ 2.22
BRF1-213ENST00000548421 A0A1W2PQF6 199 aa28.91■■■□□ 2.22
BRF1-213ENST00000548421 HEATR9A2RTY3 570 aa28.91■■■□□ 2.22
BRF1-213ENST00000548421 PRKCGP05129 697 aa28.91■■■□□ 2.22
BRF1-213ENST00000548421 PIRTP0C851 137 aa28.91■■■□□ 2.22
BRF1-213ENST00000548421 PGAM1P18669 254 aa28.91■■■□□ 2.22
BRF1-213ENST00000548421 ITGB7P26010 798 aa28.91■■■□□ 2.22
BRF1-213ENST00000548421 KYNUQ16719 465 aa28.91■■■□□ 2.22
BRF1-213ENST00000548421 TJAP1Q5JTD0 557 aa28.91■■■□□ 2.22
BRF1-213ENST00000548421 SPDYCQ5MJ68 293 aa28.91■■■□□ 2.22
BRF1-213ENST00000548421 KIAA1211LQ6NV74 962 aa28.91■■■□□ 2.22
BRF1-213ENST00000548421 PALM2Q8IXS6 379 aa28.91■■■□□ 2.22
BRF1-213ENST00000548421 BRSK1Q8TDC3 778 aa28.91■■■□□ 2.22
BRF1-213ENST00000548421 UBLCP1Q8WVY7 318 aaPredicted RBP28.91■■■□□ 2.22
BRF1-213ENST00000548421 NECAB3Q96P71 396 aaPredicted RBP28.91■■■□□ 2.22
BRF1-213ENST00000548421 SRPK1Q96SB4 655 aaKnown RBP28.91■■■□□ 2.22
BRF1-213ENST00000548421 FOXQ1Q9C009 403 aa28.91■■■□□ 2.22
BRF1-213ENST00000548421 MRM3Q9HC36 420 aaKnown RBP28.91■■■□□ 2.22
BRF1-213ENST00000548421 HACD3Q9P035 362 aa28.91■■■□□ 2.22
BRF1-213ENST00000548421 MTF2Q9Y483 593 aaPredicted RBP28.91■■■□□ 2.22
BRF1-213ENST00000548421 TCAF1Q9Y4C2 921 aa28.91■■■□□ 2.22
BRF1-213ENST00000548421 DYNC1LI1Q9Y6G9 523 aaKnown RBP28.91■■■□□ 2.22
BRF1-213ENST00000548421 C16orf96A6NNT2 1141 aa28.9■■■□□ 2.22
BRF1-213ENST00000548421 TTC4O95801 387 aa28.9■■■□□ 2.22
BRF1-213ENST00000548421 CTPS1P17812 591 aa28.9■■■□□ 2.22
BRF1-213ENST00000548421 PSMD8P48556 350 aa28.9■■■□□ 2.22
BRF1-213ENST00000548421 SATB1Q01826 763 aa28.9■■■□□ 2.22
BRF1-213ENST00000548421 LAMB3Q13751 1172 aa28.9■■■□□ 2.22
BRF1-213ENST00000548421 SEPT6Q14141 434 aa28.9■■■□□ 2.22
BRF1-213ENST00000548421 POM121L1PQ3SYA9 428 aa28.9■■■□□ 2.22
BRF1-213ENST00000548421 Q6ZS52 159 aa28.9■■■□□ 2.22
BRF1-213ENST00000548421 USP45Q70EL2 814 aa28.9■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms