RNA–Protein interactions for RNA: ENST00000548313.5

DEPDC4-205, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-205ENST00000548313 SLC25A33Q9BSK2 321 aa4.3□□□□□ -1.72
DEPDC4-205ENST00000548313 HEMGNQ9BXL5 484 aa4.3□□□□□ -1.72
DEPDC4-205ENST00000548313 SEZ6LQ9BYH1 1024 aa4.3□□□□□ -1.72
DEPDC4-205ENST00000548313 PLEKHA4Q9H4M7 779 aa4.3□□□□□ -1.72
DEPDC4-205ENST00000548313 PRKRIP1Q9H875 184 aaPredicted RBP4.3□□□□□ -1.72
DEPDC4-205ENST00000548313 SELENONQ9NZV5 590 aa4.3□□□□□ -1.72
DEPDC4-205ENST00000548313 LRRC53A6NM62 1247 aa4.29□□□□□ -1.72
DEPDC4-205ENST00000548313 KLK8O60259 260 aa4.29□□□□□ -1.72
DEPDC4-205ENST00000548313 RGS11O94810 467 aa4.29□□□□□ -1.72
DEPDC4-205ENST00000548313 PRSS2P07478 247 aa4.29□□□□□ -1.72
DEPDC4-205ENST00000548313 MMP2P08253 660 aa4.29□□□□□ -1.72
DEPDC4-205ENST00000548313 UBL4AP11441 157 aa4.29□□□□□ -1.72
DEPDC4-205ENST00000548313 ETFAP13804 333 aa4.29□□□□□ -1.72
DEPDC4-205ENST00000548313 ITGAXP20702 1163 aa4.29□□□□□ -1.72
DEPDC4-205ENST00000548313 AGAP20933 346 aa4.29□□□□□ -1.72
DEPDC4-205ENST00000548313 MXI1P50539 228 aa4.29□□□□□ -1.72
DEPDC4-205ENST00000548313 EFNA5P52803 228 aa4.29□□□□□ -1.72
DEPDC4-205ENST00000548313 LTBQ06643 244 aa4.29□□□□□ -1.72
DEPDC4-205ENST00000548313 TCTN1Q2MV58 587 aa4.29□□□□□ -1.72
DEPDC4-205ENST00000548313 DLK2Q6UY11 383 aa4.29□□□□□ -1.72
DEPDC4-205ENST00000548313 SLC46A3Q7Z3Q1 461 aa4.29□□□□□ -1.72
DEPDC4-205ENST00000548313 CLIP4Q8N3C7 705 aa4.29□□□□□ -1.72
DEPDC4-205ENST00000548313 ZCCHC9Q8N567 271 aaKnown RBP4.29□□□□□ -1.72
DEPDC4-205ENST00000548313 AADATQ8N5Z0 425 aa4.29□□□□□ -1.72
DEPDC4-205ENST00000548313 ADAMTS14Q8WXS8 1223 aa4.29□□□□□ -1.72
DEPDC4-205ENST00000548313 WASF1Q92558 559 aa4.29□□□□□ -1.72
DEPDC4-205ENST00000548313 THOC3Q96J01 351 aaKnown RBP4.29□□□□□ -1.72
DEPDC4-205ENST00000548313 ZPBPQ9BS86 351 aa4.29□□□□□ -1.72
DEPDC4-205ENST00000548313 RANBP17Q9H2T7 1088 aaKnown RBP4.29□□□□□ -1.72
DEPDC4-205ENST00000548313 HIPK2Q9H2X6 1198 aa4.29□□□□□ -1.72
DEPDC4-205ENST00000548313 OR6C3Q9NZP0 311 aa4.29□□□□□ -1.72
DEPDC4-205ENST00000548313 A0A1W2PPH5 198 aa4.28□□□□□ -1.72
DEPDC4-205ENST00000548313 LACTBL1A8MY62 500 aa4.28□□□□□ -1.72
DEPDC4-205ENST00000548313 USP17L23D6RBM5 183 aa4.28□□□□□ -1.72
DEPDC4-205ENST00000548313 EPB41L2O43491 1005 aaKnown RBP4.28□□□□□ -1.72
DEPDC4-205ENST00000548313 KCNJ13O60928 360 aa4.28□□□□□ -1.72
DEPDC4-205ENST00000548313 SERPINI2O75830 405 aa4.28□□□□□ -1.72
DEPDC4-205ENST00000548313 NGFRP08138 427 aa4.28□□□□□ -1.72
DEPDC4-205ENST00000548313 ATP1A3P13637 1013 aa4.28□□□□□ -1.72
DEPDC4-205ENST00000548313 PAX3P23760 479 aa4.28□□□□□ -1.72
DEPDC4-205ENST00000548313 HOXA11P31270 313 aaPredicted RBP4.28□□□□□ -1.72
DEPDC4-205ENST00000548313 CCKARP32238 428 aa4.28□□□□□ -1.72
DEPDC4-205ENST00000548313 RPL3P39023 403 aaKnown RBP4.28□□□□□ -1.72
DEPDC4-205ENST00000548313 CTCFP49711 727 aaPredicted RBP4.28□□□□□ -1.72
DEPDC4-205ENST00000548313 GNAQP50148 359 aa4.28□□□□□ -1.72
DEPDC4-205ENST00000548313 RAD23BP54727 409 aa4.28□□□□□ -1.72
DEPDC4-205ENST00000548313 MPP1Q00013 466 aa4.28□□□□□ -1.72
DEPDC4-205ENST00000548313 NEDD9Q14511 834 aa4.28□□□□□ -1.72
DEPDC4-205ENST00000548313 CCDC129Q6ZRS4 1044 aa4.28□□□□□ -1.72
DEPDC4-205ENST00000548313 LINGO2Q7L985 606 aa4.28□□□□□ -1.72
DEPDC4-205ENST00000548313 R3HCC1LQ7Z5L2 792 aaKnown RBP4.28□□□□□ -1.72
DEPDC4-205ENST00000548313 TEX19Q8NA77 164 aa4.28□□□□□ -1.72
DEPDC4-205ENST00000548313 SCCPDHQ8NBX0 429 aa4.28□□□□□ -1.72
DEPDC4-205ENST00000548313 BEST2Q8NFU1 509 aa4.28□□□□□ -1.72
DEPDC4-205ENST00000548313 MPP4Q96JB8 637 aa4.28□□□□□ -1.72
DEPDC4-205ENST00000548313 ZNF479Q96JC4 524 aa4.28□□□□□ -1.72
DEPDC4-205ENST00000548313 SLITRK1Q96PX8 696 aa4.28□□□□□ -1.72
DEPDC4-205ENST00000548313 MEIS3Q99687 375 aa4.28□□□□□ -1.72
DEPDC4-205ENST00000548313 NUF2Q9BZD4 464 aa4.28□□□□□ -1.72
DEPDC4-205ENST00000548313 SLC25A18Q9H1K4 315 aa4.28□□□□□ -1.72
DEPDC4-205ENST00000548313 MAGEE1Q9HCI5 957 aa4.28□□□□□ -1.72
DEPDC4-205ENST00000548313 BPIFA1Q9NP55 256 aa4.28□□□□□ -1.72
DEPDC4-205ENST00000548313 IRAK4Q9NWZ3 460 aa4.28□□□□□ -1.72
DEPDC4-205ENST00000548313 LSM4Q9Y4Z0 139 aaKnown RBP4.28□□□□□ -1.72
DEPDC4-205ENST00000548313 SCINQ9Y6U3 715 aa4.28□□□□□ -1.72
DEPDC4-205ENST00000548313 IGKV2D-30A0A075B6S6 120 aa4.27□□□□□ -1.73
DEPDC4-205ENST00000548313 A0A0U1RQJ8 604 aa4.27□□□□□ -1.73
DEPDC4-205ENST00000548313 B4E171 279 aa4.27□□□□□ -1.73
DEPDC4-205ENST00000548313 NPIPB11E5RHQ5 1161 aa4.27□□□□□ -1.73
DEPDC4-205ENST00000548313 SEC14L5O43304 696 aa4.27□□□□□ -1.73
DEPDC4-205ENST00000548313 SEC14L2O76054 403 aa4.27□□□□□ -1.73
DEPDC4-205ENST00000548313 C21orf33P30042 268 aaPredicted RBP4.27□□□□□ -1.73
DEPDC4-205ENST00000548313 CDAP32320 146 aa4.27□□□□□ -1.73
DEPDC4-205ENST00000548313 TSPAN7P41732 249 aa4.27□□□□□ -1.73
DEPDC4-205ENST00000548313 RPL7AP62424 266 aaKnown RBP4.27□□□□□ -1.73
DEPDC4-205ENST00000548313 ECT2LQ008S8 904 aa4.27□□□□□ -1.73
DEPDC4-205ENST00000548313 GRIK3Q13003 919 aa4.27□□□□□ -1.73
DEPDC4-205ENST00000548313 ERV3-1Q14264 604 aa4.27□□□□□ -1.73
DEPDC4-205ENST00000548313 PLCB4Q15147 1175 aa4.27□□□□□ -1.73
DEPDC4-205ENST00000548313 HLFQ16534 295 aa4.27□□□□□ -1.73
DEPDC4-205ENST00000548313 SGO1Q5FBB7 561 aa4.27□□□□□ -1.73
DEPDC4-205ENST00000548313 TYW3Q6IPR3 259 aaKnown RBP4.27□□□□□ -1.73
DEPDC4-205ENST00000548313 CDC73Q6P1J9 531 aa4.27□□□□□ -1.73
DEPDC4-205ENST00000548313 CRELD2Q6UXH1 353 aaPredicted RBP4.27□□□□□ -1.73
DEPDC4-205ENST00000548313 ATF7IPQ6VMQ6 1270 aa4.27□□□□□ -1.73
DEPDC4-205ENST00000548313 SHFQ7M4L6 423 aa4.27□□□□□ -1.73
DEPDC4-205ENST00000548313 GSTA5Q7RTV2 222 aa4.27□□□□□ -1.73
DEPDC4-205ENST00000548313 SPATA2LQ8IUW3 424 aaPredicted RBP4.27□□□□□ -1.73
DEPDC4-205ENST00000548313 DHX40Q8IX18 779 aaKnown RBP4.27□□□□□ -1.73
DEPDC4-205ENST00000548313 AGBL3Q8NEM8 1001 aa4.27□□□□□ -1.73
DEPDC4-205ENST00000548313 CADM4Q8NFZ8 388 aa4.27□□□□□ -1.73
DEPDC4-205ENST00000548313 ARRDC2Q8TBH0 407 aa4.27□□□□□ -1.73
DEPDC4-205ENST00000548313 NEK9Q8TD19 979 aa4.27□□□□□ -1.73
DEPDC4-205ENST00000548313 TXNDC15Q96J42 360 aa4.27□□□□□ -1.73
DEPDC4-205ENST00000548313 C7orf26Q96N11 449 aa4.27□□□□□ -1.73
DEPDC4-205ENST00000548313 ZNF570Q96NI8 536 aa4.27□□□□□ -1.73
DEPDC4-205ENST00000548313 CHMP4AQ9BY43 222 aa4.27□□□□□ -1.73
DEPDC4-205ENST00000548313 CTNNAL1Q9UBT7 734 aa4.27□□□□□ -1.73
DEPDC4-205ENST00000548313 CAMK2AQ9UQM7 478 aa4.27□□□□□ -1.73
DEPDC4-205ENST00000548313 DYTNA2CJ06 578 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms