RNA–Protein interactions for RNA: ENST00000547230.5

CACNB3-204, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3 BASIC

Gene CACNB3, Length 2,395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-204ENST00000547230 NOTUMQ6P988 496 aa12.76□□□□□ -0.37
CACNB3-204ENST00000547230 HACD2Q6Y1H2 254 aa12.76□□□□□ -0.37
CACNB3-204ENST00000547230 PRRT2Q7Z6L0 340 aaPredicted RBP12.76□□□□□ -0.37
CACNB3-204ENST00000547230 RETREG3Q86VR2 466 aa12.76□□□□□ -0.37
CACNB3-204ENST00000547230 FUNDC1Q8IVP5 155 aa12.76□□□□□ -0.37
CACNB3-204ENST00000547230 CBR4Q8N4T8 237 aa12.76□□□□□ -0.37
CACNB3-204ENST00000547230 C2CD4AQ8NCU7 369 aaPredicted RBP12.76□□□□□ -0.37
CACNB3-204ENST00000547230 PPTC7Q8NI37 304 aa12.76□□□□□ -0.37
CACNB3-204ENST00000547230 OTUD5Q96G74 571 aa12.76□□□□□ -0.37
CACNB3-204ENST00000547230 OLFM1Q99784 485 aa12.76□□□□□ -0.37
CACNB3-204ENST00000547230 UPF3AQ9H1J1 476 aaKnown RBP12.76□□□□□ -0.37
CACNB3-204ENST00000547230 RNF39Q9H2S5 420 aa12.76□□□□□ -0.37
CACNB3-204ENST00000547230 TUT1Q9H6E5 874 aaKnown RBP12.76□□□□□ -0.37
CACNB3-204ENST00000547230 PLGRKTQ9HBL7 147 aa12.76□□□□□ -0.37
CACNB3-204ENST00000547230 OR12D3Q9UGF7 316 aa12.76□□□□□ -0.37
CACNB3-204ENST00000547230 TCAF1Q9Y4C2 921 aa12.76□□□□□ -0.37
CACNB3-204ENST00000547230 PCNTO95613 3336 aa12.75□□□□□ -0.37
CACNB3-204ENST00000547230 BRCA1P38398 1863 aaKnown RBP12.75□□□□□ -0.37
CACNB3-204ENST00000547230 A0A087WXM4 84 aa12.75□□□□□ -0.37
CACNB3-204ENST00000547230 SH3PXD2BA1X283 911 aa12.75□□□□□ -0.37
CACNB3-204ENST00000547230 FAM149AA5PLN7 773 aa12.75□□□□□ -0.37
CACNB3-204ENST00000547230 UBFD1O14562 309 aaKnown RBP12.75□□□□□ -0.37
CACNB3-204ENST00000547230 IPO13O94829 963 aaKnown RBP12.75□□□□□ -0.37
CACNB3-204ENST00000547230 TSPAN8P19075 237 aa12.75□□□□□ -0.37
CACNB3-204ENST00000547230 IGFBP6P24592 240 aaPredicted RBP12.75□□□□□ -0.37
CACNB3-204ENST00000547230 CHRNA4P43681 627 aa12.75□□□□□ -0.37
CACNB3-204ENST00000547230 KPNA2P52292 529 aaKnown RBP12.75□□□□□ -0.37
CACNB3-204ENST00000547230 SLC12A2P55011 1212 aa12.75□□□□□ -0.37
CACNB3-204ENST00000547230 SV2CQ496J9 727 aa12.75□□□□□ -0.37
CACNB3-204ENST00000547230 ZBED5Q49AG3 693 aa12.75□□□□□ -0.37
CACNB3-204ENST00000547230 IRAK1BP1Q5VVH5 260 aa12.75□□□□□ -0.37
CACNB3-204ENST00000547230 Q6ZNX1 250 aa12.75□□□□□ -0.37
CACNB3-204ENST00000547230 AFAP1L2Q8N4X5 818 aa12.75□□□□□ -0.37
CACNB3-204ENST00000547230 PNPLA1Q8N8W4 532 aa12.75□□□□□ -0.37
CACNB3-204ENST00000547230 MFSD2AQ8NA29 543 aa12.75□□□□□ -0.37
CACNB3-204ENST00000547230 PPP1R13LQ8WUF5 828 aa12.75□□□□□ -0.37
CACNB3-204ENST00000547230 PHF21BQ96EK2 531 aa12.75□□□□□ -0.37
CACNB3-204ENST00000547230 CAMKK2Q96RR4 588 aa12.75□□□□□ -0.37
CACNB3-204ENST00000547230 OSMRQ99650 979 aa12.75□□□□□ -0.37
CACNB3-204ENST00000547230 COLEC11Q9BWP8 271 aa12.75□□□□□ -0.37
CACNB3-204ENST00000547230 TKTL2Q9H0I9 626 aa12.75□□□□□ -0.37
CACNB3-204ENST00000547230 EML4Q9HC35 981 aaKnown RBP12.75□□□□□ -0.37
CACNB3-204ENST00000547230 SPON1Q9HCB6 807 aa12.75□□□□□ -0.37
CACNB3-204ENST00000547230 VPS45Q9NRW7 570 aa12.75□□□□□ -0.37
CACNB3-204ENST00000547230 TMEM30AQ9NV96 361 aa12.75□□□□□ -0.37
CACNB3-204ENST00000547230 FAIMQ9NVQ4 179 aa12.75□□□□□ -0.37
CACNB3-204ENST00000547230 FBXO5Q9UKT4 447 aa12.75□□□□□ -0.37
CACNB3-204ENST00000547230 PPP2R3BQ9Y5P8 575 aa12.75□□□□□ -0.37
CACNB3-204ENST00000547230 NME4O00746 187 aa12.74□□□□□ -0.37
CACNB3-204ENST00000547230 PSMD3O43242 534 aa12.74□□□□□ -0.37
CACNB3-204ENST00000547230 FOXD2O60548 495 aaPredicted RBP12.74□□□□□ -0.37
CACNB3-204ENST00000547230 ALDOCP09972 364 aaKnown RBP12.74□□□□□ -0.37
CACNB3-204ENST00000547230 USP17L7P0C7H9 530 aa12.74□□□□□ -0.37
CACNB3-204ENST00000547230 MYF6P23409 242 aa12.74□□□□□ -0.37
CACNB3-204ENST00000547230 PNPLA4P41247 253 aa12.74□□□□□ -0.37
CACNB3-204ENST00000547230 BAG6P46379 1132 aa12.74□□□□□ -0.37
CACNB3-204ENST00000547230 LILRA4P59901 499 aa12.74□□□□□ -0.37
CACNB3-204ENST00000547230 CCNA1P78396 465 aa12.74□□□□□ -0.37
CACNB3-204ENST00000547230 POU4F1Q01851 419 aa12.74□□□□□ -0.37
CACNB3-204ENST00000547230 C16orf72Q14CZ0 275 aa12.74□□□□□ -0.37
CACNB3-204ENST00000547230 ARL13BQ3SXY8 428 aa12.74□□□□□ -0.37
CACNB3-204ENST00000547230 ANKDD1AQ495B1 522 aa12.74□□□□□ -0.37
CACNB3-204ENST00000547230 TTC33Q6PID6 262 aaPredicted RBP12.74□□□□□ -0.37
CACNB3-204ENST00000547230 LRRC43Q8N309 656 aa12.74□□□□□ -0.37
CACNB3-204ENST00000547230 SMYD1Q8NB12 490 aa12.74□□□□□ -0.37
CACNB3-204ENST00000547230 EDEM1Q92611 657 aa12.74□□□□□ -0.37
CACNB3-204ENST00000547230 PPP1R14BQ96C90 147 aa12.74□□□□□ -0.37
CACNB3-204ENST00000547230 TSGA13Q96PP4 275 aa12.74□□□□□ -0.37
CACNB3-204ENST00000547230 ADI1Q9BV57 179 aa12.74□□□□□ -0.37
CACNB3-204ENST00000547230 MUC3BQ9H195 1237 aa12.74□□□□□ -0.37
CACNB3-204ENST00000547230 GSTO2Q9H4Y5 243 aa12.74□□□□□ -0.37
CACNB3-204ENST00000547230 ELP3Q9H9T3 547 aa12.74□□□□□ -0.37
CACNB3-204ENST00000547230 TREX1Q9NSU2 369 aa12.74□□□□□ -0.37
CACNB3-204ENST00000547230 MRGBPQ9NV56 204 aa12.74□□□□□ -0.37
CACNB3-204ENST00000547230 TUBA8Q9NY65 449 aaPredicted RBP12.74□□□□□ -0.37
CACNB3-204ENST00000547230 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.74□□□□□ -0.37
CACNB3-204ENST00000547230 AURKCQ9UQB9 309 aa12.74□□□□□ -0.37
CACNB3-204ENST00000547230 AAR2Q9Y312 384 aaKnown RBP12.74□□□□□ -0.37
CACNB3-204ENST00000547230 DFFAO00273 331 aa12.74□□□□□ -0.37
CACNB3-204ENST00000547230 HSPA8P11142 646 aaKnown RBP12.74□□□□□ -0.37
CACNB3-204ENST00000547230 ADCYAP1R1P41586 468 aa12.74□□□□□ -0.37
CACNB3-204ENST00000547230 ESRRGP62508 458 aa12.74□□□□□ -0.37
CACNB3-204ENST00000547230 FAM83EQ2M2I3 478 aa12.74□□□□□ -0.37
CACNB3-204ENST00000547230 MAP7D1Q3KQU3 841 aa12.74□□□□□ -0.37
CACNB3-204ENST00000547230 TBCELQ5QJ74 424 aa12.74□□□□□ -0.37
CACNB3-204ENST00000547230 WSCD1Q658N2 575 aa12.74□□□□□ -0.37
CACNB3-204ENST00000547230 LARP4Q71RC2 724 aaKnown RBP eCLIP12.74□□□□□ -0.37
CACNB3-204ENST00000547230 CROCCP3Q8IVE0 287 aa12.74□□□□□ -0.37
CACNB3-204ENST00000547230 SHCBP1Q8NEM2 672 aa12.74□□□□□ -0.37
CACNB3-204ENST00000547230 C3orf30Q96M34 536 aa12.74□□□□□ -0.37
CACNB3-204ENST00000547230 SMOQ99835 787 aa12.74□□□□□ -0.37
CACNB3-204ENST00000547230 RHOBTB2Q9BYZ6 727 aa12.74□□□□□ -0.37
CACNB3-204ENST00000547230 ATXN3LQ9H3M9 355 aa12.74□□□□□ -0.37
CACNB3-204ENST00000547230 IL1RL2Q9HB29 575 aa12.74□□□□□ -0.37
CACNB3-204ENST00000547230 CRTAC1Q9NQ79 661 aa12.74□□□□□ -0.37
CACNB3-204ENST00000547230 CCM2LQ9NUG4 571 aaPredicted RBP12.74□□□□□ -0.37
CACNB3-204ENST00000547230 ARHGEF38Q9NXL2 777 aa12.74□□□□□ -0.37
CACNB3-204ENST00000547230 MTF2Q9Y483 593 aaPredicted RBP12.74□□□□□ -0.37
CACNB3-204ENST00000547230 TRAF6Q9Y4K3 522 aa12.74□□□□□ -0.37
CACNB3-204ENST00000547230 CSADQ9Y600 493 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms