RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 TRABDQ9H4I3 376 aa15.94■□□□□ 0.14
TRAFD1-203ENST00000547063 MTG2Q9H4K7 406 aa15.94■□□□□ 0.14
TRAFD1-203ENST00000547063 LMAN1LQ9HAT1 526 aa15.94■□□□□ 0.14
TRAFD1-203ENST00000547063 XIRP2A4UGR9 3374 aa15.93■□□□□ 0.14
TRAFD1-203ENST00000547063 HEATR9A2RTY3 570 aa15.93■□□□□ 0.14
TRAFD1-203ENST00000547063 FAM170BA6NMN3 283 aa15.93■□□□□ 0.14
TRAFD1-203ENST00000547063 KPNA3O00505 521 aaPredicted RBP15.93■□□□□ 0.14
TRAFD1-203ENST00000547063 AVILO75366 819 aa15.93■□□□□ 0.14
TRAFD1-203ENST00000547063 CRTAMO95727 393 aa15.93■□□□□ 0.14
TRAFD1-203ENST00000547063 TTC4O95801 387 aa15.93■□□□□ 0.14
TRAFD1-203ENST00000547063 IL1BP01584 269 aa15.93■□□□□ 0.14
TRAFD1-203ENST00000547063 CTSLP07711 333 aa15.93■□□□□ 0.14
TRAFD1-203ENST00000547063 PDHA1P08559 390 aa15.93■□□□□ 0.14
TRAFD1-203ENST00000547063 FAM153BP0C7A2 387 aa15.93■□□□□ 0.14
TRAFD1-203ENST00000547063 TSHRP16473 764 aa15.93■□□□□ 0.14
TRAFD1-203ENST00000547063 ADRA1DP25100 572 aa15.93■□□□□ 0.14
TRAFD1-203ENST00000547063 ITGB7P26010 798 aa15.93■□□□□ 0.14
TRAFD1-203ENST00000547063 MGAT1P26572 445 aa15.93■□□□□ 0.14
TRAFD1-203ENST00000547063 TARSP26639 723 aaKnown RBP15.93■□□□□ 0.14
TRAFD1-203ENST00000547063 MAGEA4P43358 317 aa15.93■□□□□ 0.14
TRAFD1-203ENST00000547063 CHRNA4P43681 627 aa15.93■□□□□ 0.14
TRAFD1-203ENST00000547063 PDE1BQ01064 536 aa15.93■□□□□ 0.14
TRAFD1-203ENST00000547063 ZBTB16Q05516 673 aa15.93■□□□□ 0.14
TRAFD1-203ENST00000547063 OLIG2Q13516 323 aa15.93■□□□□ 0.14
TRAFD1-203ENST00000547063 GALNT3Q14435 633 aa15.93■□□□□ 0.14
TRAFD1-203ENST00000547063 FAM153CQ494X1 144 aa15.93■□□□□ 0.14
TRAFD1-203ENST00000547063 SPDYCQ5MJ68 293 aa15.93■□□□□ 0.14
TRAFD1-203ENST00000547063 CASC4Q6P4E1 433 aa15.93■□□□□ 0.14
TRAFD1-203ENST00000547063 TMC3Q7Z5M5 1100 aa15.93■□□□□ 0.14
TRAFD1-203ENST00000547063 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.93■□□□□ 0.14
TRAFD1-203ENST00000547063 ZNF687Q8N1G0 1237 aa15.93■□□□□ 0.14
TRAFD1-203ENST00000547063 PPHLN1Q8NEY8 458 aaKnown RBP15.93■□□□□ 0.14
TRAFD1-203ENST00000547063 BRSK1Q8TDC3 778 aa15.93■□□□□ 0.14
TRAFD1-203ENST00000547063 PIH1D2Q8WWB5 315 aa15.93■□□□□ 0.14
TRAFD1-203ENST00000547063 STAMBPL1Q96FJ0 436 aa15.93■□□□□ 0.14
TRAFD1-203ENST00000547063 SIGLEC10Q96LC7 697 aa15.93■□□□□ 0.14
TRAFD1-203ENST00000547063 RANBP9Q96S59 729 aa15.93■□□□□ 0.14
TRAFD1-203ENST00000547063 EBNA1BP2Q99848 306 aaKnown RBP15.93■□□□□ 0.14
TRAFD1-203ENST00000547063 TBC1D17Q9HA65 648 aa15.93■□□□□ 0.14
TRAFD1-203ENST00000547063 MAGEE1Q9HCI5 957 aa15.93■□□□□ 0.14
TRAFD1-203ENST00000547063 ARFGAP3Q9NP61 516 aa15.93■□□□□ 0.14
TRAFD1-203ENST00000547063 SCML1Q9UN30 329 aa15.93■□□□□ 0.14
TRAFD1-203ENST00000547063 PPIL1Q9Y3C6 166 aa15.93■□□□□ 0.14
TRAFD1-203ENST00000547063 MAD1L1Q9Y6D9 718 aa15.93■□□□□ 0.14
TRAFD1-203ENST00000547063 TEX264Q9Y6I9 313 aa15.93■□□□□ 0.14
TRAFD1-203ENST00000547063 A0A0J9YYE9 177 aa15.92■□□□□ 0.14
TRAFD1-203ENST00000547063 STK25O00506 426 aa15.92■□□□□ 0.14
TRAFD1-203ENST00000547063 DYNC1I1O14576 645 aa15.92■□□□□ 0.14
TRAFD1-203ENST00000547063 ADAM23O75077 832 aa15.92■□□□□ 0.14
TRAFD1-203ENST00000547063 SPAG6O75602 509 aa15.92■□□□□ 0.14
TRAFD1-203ENST00000547063 TRBC1P01850 177 aa15.92■□□□□ 0.14
TRAFD1-203ENST00000547063 GSTA2P09210 222 aa15.92■□□□□ 0.14
TRAFD1-203ENST00000547063 CYP2A6P11509 494 aaPredicted RBP15.92■□□□□ 0.14
TRAFD1-203ENST00000547063 H2AFXP16104 143 aaPredicted RBP15.92■□□□□ 0.14
TRAFD1-203ENST00000547063 C5AR1P21730 350 aa15.92■□□□□ 0.14
TRAFD1-203ENST00000547063 ELK3P41970 407 aa15.92■□□□□ 0.14
TRAFD1-203ENST00000547063 PMS2P54278 862 aa15.92■□□□□ 0.14
TRAFD1-203ENST00000547063 SIGLEC14Q08ET2 396 aa15.92■□□□□ 0.14
TRAFD1-203ENST00000547063 QPCTQ16769 361 aa15.92■□□□□ 0.14
TRAFD1-203ENST00000547063 MMAAQ8IVH4 418 aaKnown RBP15.92■□□□□ 0.14
TRAFD1-203ENST00000547063 PALM2Q8IXS6 379 aa15.92■□□□□ 0.14
TRAFD1-203ENST00000547063 FBXO36Q8NEA4 188 aa15.92■□□□□ 0.14
TRAFD1-203ENST00000547063 PEX13Q92968 403 aa15.92■□□□□ 0.14
TRAFD1-203ENST00000547063 RAB7BQ96AH8 199 aa15.92■□□□□ 0.14
TRAFD1-203ENST00000547063 SCRN2Q96FV2 425 aa15.92■□□□□ 0.14
TRAFD1-203ENST00000547063 PWWP2AQ96N64 755 aa15.92■□□□□ 0.14
TRAFD1-203ENST00000547063 IER2Q9BTL4 223 aa15.92■□□□□ 0.14
TRAFD1-203ENST00000547063 MRM3Q9HC36 420 aaKnown RBP15.92■□□□□ 0.14
TRAFD1-203ENST00000547063 POLMQ9NP87 494 aaPredicted RBP15.92■□□□□ 0.14
TRAFD1-203ENST00000547063 ZDHHC4Q9NPG8 344 aa15.92■□□□□ 0.14
TRAFD1-203ENST00000547063 ZC3H7BQ9UGR2 993 aaKnown RBP15.92■□□□□ 0.14
TRAFD1-203ENST00000547063 FAM237BA0A1B0GVD1 139 aa15.91■□□□□ 0.14
TRAFD1-203ENST00000547063 CAPN8A6NHC0 703 aa15.91■□□□□ 0.14
TRAFD1-203ENST00000547063 C2orf81A6NN90 581 aa15.91■□□□□ 0.14
TRAFD1-203ENST00000547063 C16orf96A6NNT2 1141 aa15.91■□□□□ 0.14
TRAFD1-203ENST00000547063 UPK3BL1B0FP48 263 aa15.91■□□□□ 0.14
TRAFD1-203ENST00000547063 UPK3BL2E5RIL1 263 aa15.91■□□□□ 0.14
TRAFD1-203ENST00000547063 POLBP06746 335 aa15.91■□□□□ 0.14
TRAFD1-203ENST00000547063 TPH1P17752 444 aa15.91■□□□□ 0.14
TRAFD1-203ENST00000547063 PGAM1P18669 254 aa15.91■□□□□ 0.14
TRAFD1-203ENST00000547063 PHBP35232 272 aa15.91■□□□□ 0.14
TRAFD1-203ENST00000547063 MAGEA9P43362 315 aa15.91■□□□□ 0.14
TRAFD1-203ENST00000547063 RPS9P46781 194 aaKnown RBP15.91■□□□□ 0.14
TRAFD1-203ENST00000547063 NEK3P51956 506 aa15.91■□□□□ 0.14
TRAFD1-203ENST00000547063 DGKEP52429 567 aa15.91■□□□□ 0.14
TRAFD1-203ENST00000547063 SATB1Q01826 763 aa15.91■□□□□ 0.14
TRAFD1-203ENST00000547063 POU6F1Q14863 301 aa15.91■□□□□ 0.14
TRAFD1-203ENST00000547063 TAF1AQ15573 450 aaPredicted RBP15.91■□□□□ 0.14
TRAFD1-203ENST00000547063 CST6Q15828 149 aa15.91■□□□□ 0.14
TRAFD1-203ENST00000547063 UGP2Q16851 508 aa15.91■□□□□ 0.14
TRAFD1-203ENST00000547063 MSS51Q4VC12 460 aa15.91■□□□□ 0.14
TRAFD1-203ENST00000547063 CERCAMQ5T4B2 595 aa15.91■□□□□ 0.14
TRAFD1-203ENST00000547063 ERAP2Q6P179 960 aa15.91■□□□□ 0.14
TRAFD1-203ENST00000547063 FBXL19Q6PCT2 694 aa15.91■□□□□ 0.14
TRAFD1-203ENST00000547063 SYT13Q7L8C5 426 aa15.91■□□□□ 0.14
TRAFD1-203ENST00000547063 MREGQ8N565 214 aa15.91■□□□□ 0.14
TRAFD1-203ENST00000547063 BLOC1S5Q8TDH9 187 aa15.91■□□□□ 0.14
TRAFD1-203ENST00000547063 VOPP1Q96AW1 172 aa15.91■□□□□ 0.14
TRAFD1-203ENST00000547063 MCCC1Q96RQ3 725 aaPredicted RBP15.91■□□□□ 0.14
TRAFD1-203ENST00000547063 LYSMD1Q96S90 227 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms