RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 NR0B2Q15466 257 aa9.43□□□□□ -0.9
YBX3-218ENST00000546298 CDKN3Q16667 212 aa9.43□□□□□ -0.9
YBX3-218ENST00000546298 HADHQ16836 314 aaKnown RBP9.43□□□□□ -0.9
YBX3-218ENST00000546298 WSCD2Q2TBF2 565 aa9.43□□□□□ -0.9
YBX3-218ENST00000546298 DEFB133Q30KQ1 61 aa9.43□□□□□ -0.9
YBX3-218ENST00000546298 PRRT3Q5FWE3 981 aa9.43□□□□□ -0.9
YBX3-218ENST00000546298 CDCP2Q5VXM1 449 aa9.43□□□□□ -0.9
YBX3-218ENST00000546298 HGSNATQ68CP4 663 aa9.43□□□□□ -0.9
YBX3-218ENST00000546298 ESRP1Q6NXG1 681 aaKnown RBP9.43□□□□□ -0.9
YBX3-218ENST00000546298 LVRNQ6Q4G3 990 aa9.43□□□□□ -0.9
YBX3-218ENST00000546298 KDM7AQ6ZMT4 941 aa9.43□□□□□ -0.9
YBX3-218ENST00000546298 CYP4V2Q6ZWL3 525 aaPredicted RBP9.43□□□□□ -0.9
YBX3-218ENST00000546298 POLNQ7Z5Q5 900 aa9.43□□□□□ -0.9
YBX3-218ENST00000546298 PDZD3Q86UT5 571 aa9.43□□□□□ -0.9
YBX3-218ENST00000546298 LRRC49Q8IUZ0 686 aa9.43□□□□□ -0.9
YBX3-218ENST00000546298 ARHGAP12Q8IWW6 846 aa9.43□□□□□ -0.9
YBX3-218ENST00000546298 NPWQ8N729 165 aa9.43□□□□□ -0.9
YBX3-218ENST00000546298 NIPA2Q8N8Q9 360 aa9.43□□□□□ -0.9
YBX3-218ENST00000546298 IFI44Q8TCB0 444 aa9.43□□□□□ -0.9
YBX3-218ENST00000546298 CPLX3Q8WVH0 158 aa9.43□□□□□ -0.9
YBX3-218ENST00000546298 TEKT4Q8WW24 435 aa9.43□□□□□ -0.9
YBX3-218ENST00000546298 HSPH1Q92598 858 aa9.43□□□□□ -0.9
YBX3-218ENST00000546298 FGF11Q92914 225 aa9.43□□□□□ -0.9
YBX3-218ENST00000546298 NAT6Q93015 286 aa9.43□□□□□ -0.9
YBX3-218ENST00000546298 ECHDC3Q96DC8 303 aa9.43□□□□□ -0.9
YBX3-218ENST00000546298 APOOQ9BUR5 198 aa9.43□□□□□ -0.9
YBX3-218ENST00000546298 MBNL1Q9NR56 388 aaKnown RBP9.43□□□□□ -0.9
YBX3-218ENST00000546298 KCTD5Q9NXV2 234 aa9.43□□□□□ -0.9
YBX3-218ENST00000546298 KLF15Q9UIH9 416 aa9.43□□□□□ -0.9
YBX3-218ENST00000546298 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.43□□□□□ -0.95e-8■□□□□ 10
YBX3-218ENST00000546298 GOLGA4Q13439 2230 aaKnown RBP9.42□□□□□ -0.9
YBX3-218ENST00000546298 EME2A4GXA9 379 aaPredicted RBP9.42□□□□□ -0.9
YBX3-218ENST00000546298 CACNB4O00305 520 aaPredicted RBP9.42□□□□□ -0.9
YBX3-218ENST00000546298 CYP1A2P05177 515 aa9.42□□□□□ -0.9
YBX3-218ENST00000546298 ELFN1P0C7U0 828 aa9.42□□□□□ -0.9
YBX3-218ENST00000546298 RARAP10276 462 aa9.42□□□□□ -0.9
YBX3-218ENST00000546298 KRT10P13645 584 aa9.42□□□□□ -0.9
YBX3-218ENST00000546298 AMPD1P23109 780 aa9.42□□□□□ -0.9
YBX3-218ENST00000546298 IL1R2P27930 398 aa9.42□□□□□ -0.9
YBX3-218ENST00000546298 MMP12P39900 470 aa9.42□□□□□ -0.9
YBX3-218ENST00000546298 PBX1P40424 430 aa9.42□□□□□ -0.9
YBX3-218ENST00000546298 SSR1P43307 286 aaKnown RBP9.42□□□□□ -0.9
YBX3-218ENST00000546298 RGRP47804 291 aa9.42□□□□□ -0.9
YBX3-218ENST00000546298 HK3P52790 923 aa9.42□□□□□ -0.9
YBX3-218ENST00000546298 MTM1Q13496 603 aa9.42□□□□□ -0.9
YBX3-218ENST00000546298 C1orf61Q13536 156 aa9.42□□□□□ -0.9
YBX3-218ENST00000546298 KRT81Q14533 505 aa9.42□□□□□ -0.9
YBX3-218ENST00000546298 INPP5AQ14642 412 aa9.42□□□□□ -0.9
YBX3-218ENST00000546298 COL28A1Q2UY09 1125 aa9.42□□□□□ -0.9
YBX3-218ENST00000546298 RALGPS1Q5JS13 557 aa9.42□□□□□ -0.9
YBX3-218ENST00000546298 TPRG1LQ5T0D9 272 aa9.42□□□□□ -0.9
YBX3-218ENST00000546298 CCDC122Q5T0U0 273 aa9.42□□□□□ -0.9
YBX3-218ENST00000546298 C6orf132Q5T0Z8 1188 aa9.42□□□□□ -0.9
YBX3-218ENST00000546298 ALKBH5Q6P6C2 394 aaKnown RBP9.42□□□□□ -0.9
YBX3-218ENST00000546298 ENPP7Q6UWV6 458 aa9.42□□□□□ -0.9
YBX3-218ENST00000546298 DPPA4Q7L190 304 aa9.42□□□□□ -0.9
YBX3-218ENST00000546298 EFL1Q7Z2Z2 1120 aaKnown RBP9.42□□□□□ -0.9
YBX3-218ENST00000546298 GKN2Q86XP6 184 aa9.42□□□□□ -0.9
YBX3-218ENST00000546298 HID1Q8IV36 788 aa9.42□□□□□ -0.9
YBX3-218ENST00000546298 RBFAQ8N0V3 343 aa9.42□□□□□ -0.9
YBX3-218ENST00000546298 WDR48Q8TAF3 677 aa9.42□□□□□ -0.9
YBX3-218ENST00000546298 SPOCK2Q92563 424 aa9.42□□□□□ -0.9
YBX3-218ENST00000546298 DCBLD2Q96PD2 775 aa9.42□□□□□ -0.9
YBX3-218ENST00000546298 CSPG4P5Q96PW8 444 aa9.42□□□□□ -0.9
YBX3-218ENST00000546298 LRRC61Q9BV99 259 aa9.42□□□□□ -0.9
YBX3-218ENST00000546298 NUP85Q9BW27 656 aa9.42□□□□□ -0.9
YBX3-218ENST00000546298 THAP2Q9H0W7 228 aa9.42□□□□□ -0.9
YBX3-218ENST00000546298 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.42□□□□□ -0.9
YBX3-218ENST00000546298 HAUS2Q9NVX0 235 aa9.42□□□□□ -0.9
YBX3-218ENST00000546298 RCOR3Q9P2K3 495 aaPredicted RBP9.42□□□□□ -0.9
YBX3-218ENST00000546298 KLQ9UEF7 1012 aa9.42□□□□□ -0.9
YBX3-218ENST00000546298 LCMT1Q9UIC8 334 aa9.42□□□□□ -0.9
YBX3-218ENST00000546298 ANAPC7Q9UJX3 599 aa9.42□□□□□ -0.9
YBX3-218ENST00000546298 RALYQ9UKM9 306 aaKnown RBP9.42□□□□□ -0.9
YBX3-218ENST00000546298 PADI4Q9UM07 663 aa9.42□□□□□ -0.9
YBX3-218ENST00000546298 COQ6Q9Y2Z9 468 aa9.42□□□□□ -0.9
YBX3-218ENST00000546298 COL5A1P20908 1838 aaPredicted RBP9.42□□□□□ -0.9
YBX3-218ENST00000546298 A0A087X0T9 212 aa9.41□□□□□ -0.9
YBX3-218ENST00000546298 LY6G6EA0A0G2JKS1 128 aa9.41□□□□□ -0.9
YBX3-218ENST00000546298 TRAFD1O14545 582 aaPredicted RBP9.41□□□□□ -0.9
YBX3-218ENST00000546298 MUSKO15146 869 aa9.41□□□□□ -0.9
YBX3-218ENST00000546298 YY2O15391 372 aa9.41□□□□□ -0.9
YBX3-218ENST00000546298 SOCS5O75159 536 aa9.41□□□□□ -0.9
YBX3-218ENST00000546298 CSO75390 466 aaKnown RBP9.41□□□□□ -0.9
YBX3-218ENST00000546298 GCATO75600 419 aa9.41□□□□□ -0.9
YBX3-218ENST00000546298 TCEA3O75764 348 aa9.41□□□□□ -0.9
YBX3-218ENST00000546298 RECQL5O94762 991 aaPredicted RBP9.41□□□□□ -0.9
YBX3-218ENST00000546298 TNFP01375 233 aa9.41□□□□□ -0.9
YBX3-218ENST00000546298 PRKCGP05129 697 aa9.41□□□□□ -0.9
YBX3-218ENST00000546298 PCCBP05166 539 aa9.41□□□□□ -0.9
YBX3-218ENST00000546298 FAM228BP0C875 321 aa9.41□□□□□ -0.9
YBX3-218ENST00000546298 CYP2A6P11509 494 aaPredicted RBP9.41□□□□□ -0.9
YBX3-218ENST00000546298 MYF5P13349 255 aa9.41□□□□□ -0.9
YBX3-218ENST00000546298 TSHRP16473 764 aa9.41□□□□□ -0.9
YBX3-218ENST00000546298 EIF2S3P41091 472 aaKnown RBP9.41□□□□□ -0.9
YBX3-218ENST00000546298 CDH6P55285 790 aa9.41□□□□□ -0.9
YBX3-218ENST00000546298 KIAA1024LP59773 190 aa9.41□□□□□ -0.9
YBX3-218ENST00000546298 SRP54P61011 504 aaKnown RBP9.41□□□□□ -0.9
YBX3-218ENST00000546298 SLC10A7Q0GE19 358 aa9.41□□□□□ -0.9
YBX3-218ENST00000546298 TSR1Q2NL82 804 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms