RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 ZSCAN30Q86W11 494 aa16.94■□□□□ 0.3
LTBR-215ENST00000546296 SLC35F6Q8N357 371 aa16.94■□□□□ 0.3
LTBR-215ENST00000546296 TCEAL3Q969E4 200 aa16.94■□□□□ 0.3
LTBR-215ENST00000546296 RBM15Q96T37 977 aaKnown RBP eCLIP16.94■□□□□ 0.3
LTBR-215ENST00000546296 SLC17A9Q9BYT1 436 aa16.94■□□□□ 0.3
LTBR-215ENST00000546296 SLC25A51Q9H1U9 297 aa16.94■□□□□ 0.3
LTBR-215ENST00000546296 EBF2Q9HAK2 575 aa16.94■□□□□ 0.3
LTBR-215ENST00000546296 TRHDEQ9UKU6 1024 aa16.94■□□□□ 0.3
LTBR-215ENST00000546296 PHTF1Q9UMS5 762 aa16.94■□□□□ 0.3
LTBR-215ENST00000546296 ZFR2Q9UPR6 939 aaKnown RBP16.94■□□□□ 0.3
LTBR-215ENST00000546296 DMTF1Q9Y222 760 aa16.94■□□□□ 0.3
LTBR-215ENST00000546296 R3HDM2Q9Y2K5 976 aaKnown RBP16.94■□□□□ 0.3
LTBR-215ENST00000546296 USP27XA6NNY8 438 aa16.93■□□□□ 0.3
LTBR-215ENST00000546296 KCNN4O15554 427 aa16.93■□□□□ 0.3
LTBR-215ENST00000546296 ZNF189O75820 626 aaPredicted RBP16.93■□□□□ 0.3
LTBR-215ENST00000546296 PAK4O96013 591 aaPredicted RBP16.93■□□□□ 0.3
LTBR-215ENST00000546296 AKT2P31751 481 aa16.93■□□□□ 0.3
LTBR-215ENST00000546296 CSNK1EP49674 416 aaKnown RBP16.93■□□□□ 0.3
LTBR-215ENST00000546296 RACK1P63244 317 aaKnown RBP16.93■□□□□ 0.3
LTBR-215ENST00000546296 IRX4P78413 519 aa16.93■□□□□ 0.3
LTBR-215ENST00000546296 SKOR1P84550 965 aa16.93■□□□□ 0.3
LTBR-215ENST00000546296 STAT4Q14765 748 aa16.93■□□□□ 0.3
LTBR-215ENST00000546296 TMEM52BQ4KMG9 183 aa16.93■□□□□ 0.3
LTBR-215ENST00000546296 TMEM259Q4ZIN3 620 aa16.93■□□□□ 0.3
LTBR-215ENST00000546296 ZNF567Q8N184 647 aa16.93■□□□□ 0.3
LTBR-215ENST00000546296 C1orf216Q8TAB5 229 aa16.93■□□□□ 0.3
LTBR-215ENST00000546296 SKA1Q96BD8 255 aa16.93■□□□□ 0.3
LTBR-215ENST00000546296 IMP4Q96G21 291 aaKnown RBP16.93■□□□□ 0.3
LTBR-215ENST00000546296 SLC6A18Q96N87 628 aa16.93■□□□□ 0.3
LTBR-215ENST00000546296 ORAI3Q9BRQ5 295 aa16.93■□□□□ 0.3
LTBR-215ENST00000546296 CHKBQ9Y259 395 aa16.93■□□□□ 0.3
LTBR-215ENST00000546296 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.93■□□□□ 0.3
LTBR-215ENST00000546296 SLCO1B1Q9Y6L6 691 aa16.93■□□□□ 0.3
LTBR-215ENST00000546296 SPAG17Q6Q759 2223 aa16.93■□□□□ 0.3
LTBR-215ENST00000546296 SHROOM3Q8TF72 1996 aa16.93■□□□□ 0.3
LTBR-215ENST00000546296 NUMA1Q14980 2115 aa16.93■□□□□ 0.3
LTBR-215ENST00000546296 A8MX80 341 aa16.92■□□□□ 0.3
LTBR-215ENST00000546296 C10orf142B7Z368 130 aa16.92■□□□□ 0.3
LTBR-215ENST00000546296 PRAMEF26H0Y7S4 382 aa16.92■□□□□ 0.3
LTBR-215ENST00000546296 SPINT1O43278 529 aa16.92■□□□□ 0.3
LTBR-215ENST00000546296 SYPP08247 313 aa16.92■□□□□ 0.3
LTBR-215ENST00000546296 MMP2P08253 660 aa16.92■□□□□ 0.3
LTBR-215ENST00000546296 LIG3P49916 1009 aa16.92■□□□□ 0.3
LTBR-215ENST00000546296 ATXN3P54252 364 aaPredicted RBP16.92■□□□□ 0.3
LTBR-215ENST00000546296 C21orf59P57076 290 aa16.92■□□□□ 0.3
LTBR-215ENST00000546296 NAPEPLDQ6IQ20 393 aa16.92■□□□□ 0.3
LTBR-215ENST00000546296 MAIP1Q8WWC4 291 aa16.92■□□□□ 0.3
LTBR-215ENST00000546296 MYOCQ99972 504 aa16.92■□□□□ 0.3
LTBR-215ENST00000546296 GTPBP2Q9BX10 602 aaKnown RBP16.92■□□□□ 0.3
LTBR-215ENST00000546296 TDRD1Q9BXT4 1180 aaKnown RBP16.92■□□□□ 0.3
LTBR-215ENST00000546296 FRMD8P1Q9BZ68 369 aaPredicted RBP16.92■□□□□ 0.3
LTBR-215ENST00000546296 PCDH9Q9HC56 1237 aa16.92■□□□□ 0.3
LTBR-215ENST00000546296 FSCN3Q9NQT6 498 aa16.92■□□□□ 0.3
LTBR-215ENST00000546296 RSPH14Q9UHP6 348 aa16.92■□□□□ 0.3
LTBR-215ENST00000546296 EP300Q09472 2414 aaPredicted RBP16.92■□□□□ 0.3
LTBR-215ENST00000546296 ZNF292O60281 2723 aa16.92■□□□□ 0.3
LTBR-215ENST00000546296 OTOGLQ3ZCN5 2332 aa16.92■□□□□ 0.3
LTBR-215ENST00000546296 USP34Q70CQ2 3546 aa16.91■□□□□ 0.3
LTBR-215ENST00000546296 RIF1Q5UIP0 2472 aaKnown RBP16.91■□□□□ 0.3
LTBR-215ENST00000546296 A0A1B0GVT2 93 aa16.91■□□□□ 0.3
LTBR-215ENST00000546296 F5H423 210 aaPredicted RBP16.91■□□□□ 0.3
LTBR-215ENST00000546296 LZTS3O60299 673 aaPredicted RBP16.91■□□□□ 0.3
LTBR-215ENST00000546296 PMPCBO75439 489 aa16.91■□□□□ 0.3
LTBR-215ENST00000546296 TM7SF2O76062 418 aa16.91■□□□□ 0.3
LTBR-215ENST00000546296 FGGP02679 453 aa16.91■□□□□ 0.3
LTBR-215ENST00000546296 PDHA1P08559 390 aa16.91■□□□□ 0.3
LTBR-215ENST00000546296 CYP2A6P11509 494 aaPredicted RBP16.91■□□□□ 0.3
LTBR-215ENST00000546296 CTPS1P17812 591 aa16.91■□□□□ 0.3
LTBR-215ENST00000546296 NFKB1P19838 968 aa16.91■□□□□ 0.3
LTBR-215ENST00000546296 HNRNPA2B1P22626 353 aaKnown RBP16.91■□□□□ 0.3
LTBR-215ENST00000546296 CD38P28907 300 aa16.91■□□□□ 0.3
LTBR-215ENST00000546296 MMP12P39900 470 aa16.91■□□□□ 0.3
LTBR-215ENST00000546296 TNNT3P45378 269 aaPredicted RBP16.91■□□□□ 0.3
LTBR-215ENST00000546296 GNG11P61952 73 aa16.91■□□□□ 0.3
LTBR-215ENST00000546296 LMNB2Q03252 620 aa16.91■□□□□ 0.3
LTBR-215ENST00000546296 IHHQ14623 411 aa16.91■□□□□ 0.3
LTBR-215ENST00000546296 PCSK7Q16549 785 aa16.91■□□□□ 0.3
LTBR-215ENST00000546296 LONRF2Q1L5Z9 754 aa16.91■□□□□ 0.3
LTBR-215ENST00000546296 ITPRIPL1Q6GPH6 555 aa16.91■□□□□ 0.3
LTBR-215ENST00000546296 CCDC70Q6NSX1 233 aa16.91■□□□□ 0.3
LTBR-215ENST00000546296 USP45Q70EL2 814 aa16.91■□□□□ 0.3
LTBR-215ENST00000546296 DPPA4Q7L190 304 aa16.91■□□□□ 0.3
LTBR-215ENST00000546296 KDELC2Q7Z4H8 507 aa16.91■□□□□ 0.3
LTBR-215ENST00000546296 LPCAT1Q8NF37 534 aa16.91■□□□□ 0.3
LTBR-215ENST00000546296 SPATA22Q8NHS9 363 aa16.91■□□□□ 0.3
LTBR-215ENST00000546296 PIH1D2Q8WWB5 315 aa16.91■□□□□ 0.3
LTBR-215ENST00000546296 C1orf54Q8WWF1 131 aa16.91■□□□□ 0.3
LTBR-215ENST00000546296 ATG4AQ8WYN0 398 aa16.91■□□□□ 0.3
LTBR-215ENST00000546296 SPOCK2Q92563 424 aa16.91■□□□□ 0.3
LTBR-215ENST00000546296 IFT43Q96FT9 208 aa16.91■□□□□ 0.3
LTBR-215ENST00000546296 PBKQ96KB5 322 aa16.91■□□□□ 0.3
LTBR-215ENST00000546296 C1QTNF7Q9BXJ2 289 aa16.91■□□□□ 0.3
LTBR-215ENST00000546296 C1QTNF2Q9BXJ5 285 aa16.91■□□□□ 0.3
LTBR-215ENST00000546296 ADGRE3Q9BY15 652 aa16.91■□□□□ 0.3
LTBR-215ENST00000546296 CAPN10Q9HC96 672 aa16.91■□□□□ 0.3
LTBR-215ENST00000546296 FZD3Q9NPG1 666 aa16.91■□□□□ 0.3
LTBR-215ENST00000546296 UBP1Q9NZI7 540 aa16.91■□□□□ 0.3
LTBR-215ENST00000546296 B4GALT6Q9UBX8 382 aa16.91■□□□□ 0.3
LTBR-215ENST00000546296 PIEZO1Q92508 2521 aa16.9■□□□□ 0.3
LTBR-215ENST00000546296 ARHGAP33O14559 1287 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms