RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 PIEZO1Q92508 2521 aa20.61■□□□□ 0.89
HMGA2-211ENST00000545998 PGRMC1O00264 195 aaKnown RBP20.61■□□□□ 0.89
HMGA2-211ENST00000545998 RIOK3O14730 519 aaKnown RBP20.61■□□□□ 0.89
HMGA2-211ENST00000545998 MT-CYBP00156 380 aaPredicted RBP20.61■□□□□ 0.89
HMGA2-211ENST00000545998 PRLP01236 227 aa20.61■□□□□ 0.89
HMGA2-211ENST00000545998 PRKCGP05129 697 aa20.61■□□□□ 0.89
HMGA2-211ENST00000545998 MMP12P39900 470 aa20.61■□□□□ 0.89
HMGA2-211ENST00000545998 GDF10P55107 478 aa20.61■□□□□ 0.89
HMGA2-211ENST00000545998 ETF1P62495 437 aaKnown RBP20.61■□□□□ 0.89
HMGA2-211ENST00000545998 CREB5Q02930 508 aa20.61■□□□□ 0.89
HMGA2-211ENST00000545998 ELP6Q0PNE2 266 aa20.61■□□□□ 0.89
HMGA2-211ENST00000545998 WDR45BQ5MNZ6 344 aa20.61■□□□□ 0.89
HMGA2-211ENST00000545998 PEAR1Q5VY43 1037 aaPredicted RBP20.61■□□□□ 0.89
HMGA2-211ENST00000545998 ERAP2Q6P179 960 aa20.61■□□□□ 0.89
HMGA2-211ENST00000545998 ASCL5Q7RTU5 278 aa20.61■□□□□ 0.89
HMGA2-211ENST00000545998 HORMAD1Q86X24 394 aa20.61■□□□□ 0.89
HMGA2-211ENST00000545998 PAF1Q8N7H5 531 aa20.61■□□□□ 0.89
HMGA2-211ENST00000545998 PRELID2Q8N945 189 aa20.61■□□□□ 0.89
HMGA2-211ENST00000545998 CCDC110Q8TBZ0 833 aa20.61■□□□□ 0.89
HMGA2-211ENST00000545998 RTP4Q96DX8 246 aa20.61■□□□□ 0.89
HMGA2-211ENST00000545998 NAP1L3Q99457 506 aaPredicted RBP20.61■□□□□ 0.89
HMGA2-211ENST00000545998 ORAI3Q9BRQ5 295 aa20.61■□□□□ 0.89
HMGA2-211ENST00000545998 EBF2Q9HAK2 575 aa20.61■□□□□ 0.89
HMGA2-211ENST00000545998 HOMER3Q9NSC5 361 aa20.61■□□□□ 0.89
HMGA2-211ENST00000545998 SMARCAL1Q9NZC9 954 aa20.61■□□□□ 0.89
HMGA2-211ENST00000545998 RSPH14Q9UHP6 348 aa20.61■□□□□ 0.89
HMGA2-211ENST00000545998 GMEB2Q9UKD1 530 aa20.61■□□□□ 0.89
HMGA2-211ENST00000545998 PILRBQ9UKJ0 227 aa20.61■□□□□ 0.89
HMGA2-211ENST00000545998 PHTF1Q9UMS5 762 aa20.61■□□□□ 0.89
HMGA2-211ENST00000545998 CHKBQ9Y259 395 aa20.61■□□□□ 0.89
HMGA2-211ENST00000545998 PPIL1Q9Y3C6 166 aa20.61■□□□□ 0.89
HMGA2-211ENST00000545998 GVINP1Q7Z2Y8 2422 aa20.6■□□□□ 0.89
HMGA2-211ENST00000545998 A0A1W2PQU0 124 aa20.6■□□□□ 0.89
HMGA2-211ENST00000545998 NEMP1O14524 444 aa20.6■□□□□ 0.89
HMGA2-211ENST00000545998 OPHN1O60890 802 aa20.6■□□□□ 0.89
HMGA2-211ENST00000545998 ITGAVP06756 1048 aa20.6■□□□□ 0.89
HMGA2-211ENST00000545998 MAOBP27338 520 aa20.6■□□□□ 0.89
HMGA2-211ENST00000545998 STIP1P31948 543 aaKnown RBP20.6■□□□□ 0.89
HMGA2-211ENST00000545998 ZNF284Q2VY69 593 aa20.6■□□□□ 0.89
HMGA2-211ENST00000545998 TMEM52BQ4KMG9 183 aa20.6■□□□□ 0.89
HMGA2-211ENST00000545998 TMEM259Q4ZIN3 620 aa20.6■□□□□ 0.89
HMGA2-211ENST00000545998 ITPRIPL1Q6GPH6 555 aa20.6■□□□□ 0.89
HMGA2-211ENST00000545998 KIAA1161Q6NSJ0 714 aa20.6■□□□□ 0.89
HMGA2-211ENST00000545998 SYT12Q8IV01 421 aa20.6■□□□□ 0.89
HMGA2-211ENST00000545998 RGL4Q8IZJ4 473 aa20.6■□□□□ 0.89
HMGA2-211ENST00000545998 SNX19Q92543 992 aa20.6■□□□□ 0.89
HMGA2-211ENST00000545998 FEM1CQ96JP0 617 aa20.6■□□□□ 0.89
HMGA2-211ENST00000545998 ARRDC1-AS1Q9H2J1 176 aa20.6■□□□□ 0.89
HMGA2-211ENST00000545998 PCDH9Q9HC56 1237 aa20.6■□□□□ 0.89
HMGA2-211ENST00000545998 TMEM74BQ9NUR3 256 aa20.6■□□□□ 0.89
HMGA2-211ENST00000545998 ZNF148Q9UQR1 794 aa20.6■□□□□ 0.89
HMGA2-211ENST00000545998 GCATO75600 419 aa20.59■□□□□ 0.89
HMGA2-211ENST00000545998 CD27P26842 260 aa20.59■□□□□ 0.89
HMGA2-211ENST00000545998 MAT2AP31153 395 aaKnown RBP20.59■□□□□ 0.89
HMGA2-211ENST00000545998 RPS21P63220 83 aaKnown RBP20.59■□□□□ 0.89
HMGA2-211ENST00000545998 SEL1L3Q68CR1 1132 aa20.59■□□□□ 0.89
HMGA2-211ENST00000545998 NYAP1Q6ZVC0 841 aa20.59■□□□□ 0.89
HMGA2-211ENST00000545998 C1orf216Q8TAB5 229 aa20.59■□□□□ 0.89
HMGA2-211ENST00000545998 PIGKQ92643 395 aa20.59■□□□□ 0.89
HMGA2-211ENST00000545998 OXNAD1Q96HP4 312 aaPredicted RBP20.59■□□□□ 0.89
HMGA2-211ENST00000545998 TRIB3Q96RU7 358 aa20.59■□□□□ 0.89
HMGA2-211ENST00000545998 GORASP1Q9BQQ3 440 aa20.59■□□□□ 0.89
HMGA2-211ENST00000545998 UBP1Q9NZI7 540 aa20.59■□□□□ 0.89
HMGA2-211ENST00000545998 FAM153AQ9UHL3 310 aa20.59■□□□□ 0.89
HMGA2-211ENST00000545998 EIF2B4Q9UI10 523 aaKnown RBP20.59■□□□□ 0.89
HMGA2-211ENST00000545998 DRG1Q9Y295 367 aaKnown RBP20.59■□□□□ 0.89
HMGA2-211ENST00000545998 SAR1BQ9Y6B6 198 aa20.59■□□□□ 0.89
HMGA2-211ENST00000545998 KNL1Q8NG31 2342 aa20.59■□□□□ 0.89
HMGA2-211ENST00000545998 ATXN2Q99700 1313 aaKnown RBP20.59■□□□□ 0.89
HMGA2-211ENST00000545998 A0A1W2PPC4 97 aa20.59■□□□□ 0.89
HMGA2-211ENST00000545998 F5H423 210 aaPredicted RBP20.59■□□□□ 0.89
HMGA2-211ENST00000545998 PSMB4P28070 264 aa20.59■□□□□ 0.89
HMGA2-211ENST00000545998 HOXD12P35452 270 aa20.59■□□□□ 0.89
HMGA2-211ENST00000545998 DPP6P42658 865 aa20.59■□□□□ 0.89
HMGA2-211ENST00000545998 RPL26P61254 145 aaKnown RBP20.59■□□□□ 0.89
HMGA2-211ENST00000545998 KDELC1Q6UW63 502 aa20.59■□□□□ 0.89
HMGA2-211ENST00000545998 ZSCAN30Q86W11 494 aa20.59■□□□□ 0.89
HMGA2-211ENST00000545998 SCRN2Q96FV2 425 aa20.59■□□□□ 0.89
HMGA2-211ENST00000545998 MCCC1Q96RQ3 725 aaPredicted RBP20.59■□□□□ 0.89
HMGA2-211ENST00000545998 AP1M1Q9BXS5 423 aa20.59■□□□□ 0.89
HMGA2-211ENST00000545998 VPS45Q9NRW7 570 aa20.59■□□□□ 0.89
HMGA2-211ENST00000545998 NCDNQ9UBB6 729 aa20.59■□□□□ 0.89
HMGA2-211ENST00000545998 RPL26L1Q9UNX3 145 aaKnown RBP20.59■□□□□ 0.89
HMGA2-211ENST00000545998 SLCO1B1Q9Y6L6 691 aa20.59■□□□□ 0.89
HMGA2-211ENST00000545998 PMPCBO75439 489 aa20.58■□□□□ 0.88
HMGA2-211ENST00000545998 NUDT1P36639 197 aa20.58■□□□□ 0.88
HMGA2-211ENST00000545998 MPLP40238 635 aa20.58■□□□□ 0.88
HMGA2-211ENST00000545998 FAM193AP78312 1265 aa20.58■□□□□ 0.88
HMGA2-211ENST00000545998 SEMG2Q02383 582 aa20.58■□□□□ 0.88
HMGA2-211ENST00000545998 PCSK7Q16549 785 aa20.58■□□□□ 0.88
HMGA2-211ENST00000545998 P3H1Q32P28 736 aa20.58■□□□□ 0.88
HMGA2-211ENST00000545998 PLA2G2CQ5R387 149 aa20.58■□□□□ 0.88
HMGA2-211ENST00000545998 DPPA4Q7L190 304 aa20.58■□□□□ 0.88
HMGA2-211ENST00000545998 CXorf40AQ8TE69 158 aa20.58■□□□□ 0.88
HMGA2-211ENST00000545998 RUBCNQ92622 972 aa20.58■□□□□ 0.88
HMGA2-211ENST00000545998 WRAP53Q9BUR4 548 aaKnown RBP20.58■□□□□ 0.88
HMGA2-211ENST00000545998 B4GALT6Q9UBX8 382 aa20.58■□□□□ 0.88
HMGA2-211ENST00000545998 CFAP54Q96N23 3096 aa20.58■□□□□ 0.88
HMGA2-211ENST00000545998 A0A0J9YYE9 177 aa20.57■□□□□ 0.88
HMGA2-211ENST00000545998 IGLON5A6NGN9 336 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms