RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 PCDHB5Q9Y5E4 795 aa12.53□□□□□ -0.4
PAAF1-215ENST00000544909 SMIM31A0A1B0GVY4 71 aa12.53□□□□□ -0.4
PAAF1-215ENST00000544909 E2F8A0AVK6 867 aa12.53□□□□□ -0.4
PAAF1-215ENST00000544909 DYTNA2CJ06 578 aa12.53□□□□□ -0.4
PAAF1-215ENST00000544909 TCAF2A6NFQ2 919 aa12.53□□□□□ -0.4
PAAF1-215ENST00000544909 AIM2O14862 343 aa12.53□□□□□ -0.4
PAAF1-215ENST00000544909 MSI1O43347 362 aaKnown RBP12.53□□□□□ -0.4
PAAF1-215ENST00000544909 FGF4P08620 206 aa12.53□□□□□ -0.4
PAAF1-215ENST00000544909 PSMA3P25788 255 aa12.53□□□□□ -0.4
PAAF1-215ENST00000544909 MRPL19P49406 292 aaKnown RBP12.53□□□□□ -0.4
PAAF1-215ENST00000544909 ZNF157P51786 506 aaPredicted RBP12.53□□□□□ -0.4
PAAF1-215ENST00000544909 THOP1P52888 689 aa12.53□□□□□ -0.4
PAAF1-215ENST00000544909 USP46P62068 366 aa12.53□□□□□ -0.4
PAAF1-215ENST00000544909 FAM189BP81408 668 aa12.53□□□□□ -0.4
PAAF1-215ENST00000544909 CREB5Q02930 508 aa12.53□□□□□ -0.4
PAAF1-215ENST00000544909 ADGRE1Q14246 886 aa12.53□□□□□ -0.4
PAAF1-215ENST00000544909 PTK2BQ14289 1009 aa12.53□□□□□ -0.4
PAAF1-215ENST00000544909 C5orf22Q49AR2 442 aa12.53□□□□□ -0.4
PAAF1-215ENST00000544909 TCHHL1Q5QJ38 904 aaPredicted RBP12.53□□□□□ -0.4
PAAF1-215ENST00000544909 CST9Q5W186 159 aa12.53□□□□□ -0.4
PAAF1-215ENST00000544909 MRNIPQ6NTE8 343 aa12.53□□□□□ -0.4
PAAF1-215ENST00000544909 TICAM1Q8IUC6 712 aa12.53□□□□□ -0.4
PAAF1-215ENST00000544909 HOMEZQ8IX15 550 aa12.53□□□□□ -0.4
PAAF1-215ENST00000544909 RCN3Q96D15 328 aa12.53□□□□□ -0.4
PAAF1-215ENST00000544909 SPATA17Q96L03 361 aa12.53□□□□□ -0.4
PAAF1-215ENST00000544909 TMEM209Q96SK2 561 aa12.53□□□□□ -0.4
PAAF1-215ENST00000544909 NDFIP2Q9NV92 336 aa12.53□□□□□ -0.4
PAAF1-215ENST00000544909 SLC2A6Q9UGQ3 507 aa12.53□□□□□ -0.4
PAAF1-215ENST00000544909 SFMBT1Q9UHJ3 866 aa12.53□□□□□ -0.4
PAAF1-215ENST00000544909 VPS9D1Q9Y2B5 631 aa12.53□□□□□ -0.4
PAAF1-215ENST00000544909 SLC4A7Q9Y6M7 1214 aa12.53□□□□□ -0.4
PAAF1-215ENST00000544909 PRSS51A0A1B0GVH4 220 aa12.52□□□□□ -0.41
PAAF1-215ENST00000544909 RAMP2O60895 175 aa12.52□□□□□ -0.41
PAAF1-215ENST00000544909 SMIM24O75264 130 aa12.52□□□□□ -0.41
PAAF1-215ENST00000544909 ASGR1P07306 291 aa12.52□□□□□ -0.41
PAAF1-215ENST00000544909 SLC10A3P09131 477 aa12.52□□□□□ -0.41
PAAF1-215ENST00000544909 SAT1P21673 171 aa12.52□□□□□ -0.41
PAAF1-215ENST00000544909 CD9P21926 228 aa12.52□□□□□ -0.41
PAAF1-215ENST00000544909 CES1P23141 567 aa12.52□□□□□ -0.41
PAAF1-215ENST00000544909 PEX2P28328 305 aa12.52□□□□□ -0.41
PAAF1-215ENST00000544909 GMPRP36959 345 aa12.52□□□□□ -0.41
PAAF1-215ENST00000544909 ALDH1A3P47895 512 aa12.52□□□□□ -0.41
PAAF1-215ENST00000544909 PRAMEP78395 509 aa12.52□□□□□ -0.41
PAAF1-215ENST00000544909 ROR2Q01974 943 aaKnown RBP12.52□□□□□ -0.41
PAAF1-215ENST00000544909 SEPT6Q14141 434 aa12.52□□□□□ -0.41
PAAF1-215ENST00000544909 MMEL1Q495T6 779 aa12.52□□□□□ -0.41
PAAF1-215ENST00000544909 SLC39A12Q504Y0 691 aa12.52□□□□□ -0.41
PAAF1-215ENST00000544909 COQ5Q5HYK3 327 aa12.52□□□□□ -0.41
PAAF1-215ENST00000544909 HECTD2Q5U5R9 776 aa12.52□□□□□ -0.41
PAAF1-215ENST00000544909 CUZD1Q86UP6 607 aa12.52□□□□□ -0.41
PAAF1-215ENST00000544909 BBS5Q8N3I7 341 aa12.52□□□□□ -0.41
PAAF1-215ENST00000544909 GALNT15Q8N3T1 639 aa12.52□□□□□ -0.41
PAAF1-215ENST00000544909 CCNYL1Q8N7R7 359 aa12.52□□□□□ -0.41
PAAF1-215ENST00000544909 ARRDC2Q8TBH0 407 aa12.52□□□□□ -0.41
PAAF1-215ENST00000544909 SPPL2BQ8TCT7 592 aa12.52□□□□□ -0.41
PAAF1-215ENST00000544909 TSPEARQ8WU66 669 aa12.52□□□□□ -0.41
PAAF1-215ENST00000544909 ROPN1LQ96C74 230 aa12.52□□□□□ -0.41
PAAF1-215ENST00000544909 LRGUKQ96M69 825 aa12.52□□□□□ -0.41
PAAF1-215ENST00000544909 CDRT15Q96T59 188 aa12.52□□□□□ -0.41
PAAF1-215ENST00000544909 TLR8Q9NR97 1041 aaKnown RBP12.52□□□□□ -0.41
PAAF1-215ENST00000544909 INTS10Q9NVR2 710 aaKnown RBP12.52□□□□□ -0.41
PAAF1-215ENST00000544909 DTNAQ9Y4J8 743 aa12.52□□□□□ -0.41
PAAF1-215ENST00000544909 NEMP1O14524 444 aa12.51□□□□□ -0.41
PAAF1-215ENST00000544909 ACOT8O14734 319 aa12.51□□□□□ -0.41
PAAF1-215ENST00000544909 UBDO15205 165 aa12.51□□□□□ -0.41
PAAF1-215ENST00000544909 VPS4BO75351 444 aa12.51□□□□□ -0.41
PAAF1-215ENST00000544909 S1PR4O95977 384 aa12.51□□□□□ -0.41
PAAF1-215ENST00000544909 C8BP07358 591 aa12.51□□□□□ -0.41
PAAF1-215ENST00000544909 MMP2P08253 660 aa12.51□□□□□ -0.41
PAAF1-215ENST00000544909 PABPC4LP0CB38 370 aaKnown RBP12.51□□□□□ -0.41
PAAF1-215ENST00000544909 FDXRP22570 491 aa12.51□□□□□ -0.41
PAAF1-215ENST00000544909 AVPR1AP37288 418 aa12.51□□□□□ -0.41
PAAF1-215ENST00000544909 CHN2P52757 468 aa12.51□□□□□ -0.41
PAAF1-215ENST00000544909 HERVK_113P63132 956 aa12.51□□□□□ -0.41
PAAF1-215ENST00000544909 SERINC3Q13530 473 aa12.51□□□□□ -0.41
PAAF1-215ENST00000544909 MRPL58Q14197 206 aaKnown RBP12.51□□□□□ -0.41
PAAF1-215ENST00000544909 CSHL1Q14406 222 aa12.51□□□□□ -0.41
PAAF1-215ENST00000544909 SMAD1Q15797 465 aaKnown RBP12.51□□□□□ -0.41
PAAF1-215ENST00000544909 PDCD2Q16342 344 aaPredicted RBP12.51□□□□□ -0.41
PAAF1-215ENST00000544909 NOMO2Q5JPE7 1267 aa12.51□□□□□ -0.41
PAAF1-215ENST00000544909 NXNQ6DKJ4 435 aa12.51□□□□□ -0.41
PAAF1-215ENST00000544909 ZNF280DQ6N043 979 aa12.51□□□□□ -0.41
PAAF1-215ENST00000544909 CNSTQ6PJW8 725 aa12.51□□□□□ -0.41
PAAF1-215ENST00000544909 SLC30A9Q6PML9 568 aa12.51□□□□□ -0.41
PAAF1-215ENST00000544909 C14orf80Q86SX3 495 aa12.51□□□□□ -0.41
PAAF1-215ENST00000544909 COLGALT2Q8IYK4 626 aa12.51□□□□□ -0.41
PAAF1-215ENST00000544909 CHCHD4Q8N4Q1 142 aa12.51□□□□□ -0.41
PAAF1-215ENST00000544909 BRSK1Q8TDC3 778 aa12.51□□□□□ -0.41
PAAF1-215ENST00000544909 NCSTNQ92542 709 aa12.51□□□□□ -0.41
PAAF1-215ENST00000544909 HMCESQ96FZ2 354 aa12.51□□□□□ -0.41
PAAF1-215ENST00000544909 TCF12Q99081 682 aa12.51□□□□□ -0.41
PAAF1-215ENST00000544909 ERVK-6Q9BXR3 956 aa12.51□□□□□ -0.41
PAAF1-215ENST00000544909 EBF3Q9H4W6 596 aa12.51□□□□□ -0.41
PAAF1-215ENST00000544909 NT5MQ9NPB1 228 aa12.51□□□□□ -0.41
PAAF1-215ENST00000544909 SPAG4Q9NPE6 437 aa12.51□□□□□ -0.41
PAAF1-215ENST00000544909 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.51□□□□□ -0.41
PAAF1-215ENST00000544909 MPP6Q9NZW5 540 aa12.51□□□□□ -0.41
PAAF1-215ENST00000544909 RIMS3Q9UJD0 308 aa12.51□□□□□ -0.41
PAAF1-215ENST00000544909 TMCO1Q9UM00 188 aa12.51□□□□□ -0.41
PAAF1-215ENST00000544909 ARIH1Q9Y4X5 557 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms