RNA–Protein interactions for RNA: ENST00000544866.5

PDCD2-213, Transcript of programmed cell death 2, humanhuman

TSL 5

Gene PDCD2, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-213ENST00000544866 TEX44Q53QW1 395 aa16.95■□□□□ 0.3
PDCD2-213ENST00000544866 SLC45A4Q5BKX6 768 aa16.95■□□□□ 0.3
PDCD2-213ENST00000544866 NAPEPLDQ6IQ20 393 aa16.95■□□□□ 0.3
PDCD2-213ENST00000544866 LAYNQ6UX15 382 aa16.95■□□□□ 0.3
PDCD2-213ENST00000544866 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.95■□□□□ 0.3
PDCD2-213ENST00000544866 C12orf50Q8NA57 414 aaPredicted RBP16.95■□□□□ 0.3
PDCD2-213ENST00000544866 TEKT5Q96M29 485 aa16.95■□□□□ 0.3
PDCD2-213ENST00000544866 FAM118BQ9BPY3 351 aa16.95■□□□□ 0.3
PDCD2-213ENST00000544866 TLR10Q9BXR5 811 aa16.95■□□□□ 0.3
PDCD2-213ENST00000544866 CARD9Q9H257 536 aa16.95■□□□□ 0.3
PDCD2-213ENST00000544866 A0A1W2PR77 199 aa16.94■□□□□ 0.3
PDCD2-213ENST00000544866 IGLON5A6NGN9 336 aa16.94■□□□□ 0.3
PDCD2-213ENST00000544866 NEMP1O14524 444 aa16.94■□□□□ 0.3
PDCD2-213ENST00000544866 SLC31A1O15431 190 aa16.94■□□□□ 0.3
PDCD2-213ENST00000544866 FZD6O60353 706 aa16.94■□□□□ 0.3
PDCD2-213ENST00000544866 CPP00450 1065 aa16.94■□□□□ 0.3
PDCD2-213ENST00000544866 WNT1P04628 370 aa16.94■□□□□ 0.3
PDCD2-213ENST00000544866 ENGP17813 658 aa16.94■□□□□ 0.3
PDCD2-213ENST00000544866 MMP12P39900 470 aa16.94■□□□□ 0.3
PDCD2-213ENST00000544866 GRIA4P48058 902 aa16.94■□□□□ 0.3
PDCD2-213ENST00000544866 CSNK1EP49674 416 aaKnown RBP16.94■□□□□ 0.3
PDCD2-213ENST00000544866 POLR2LP62875 67 aaKnown RBP16.94■□□□□ 0.3
PDCD2-213ENST00000544866 SKOR1P84550 965 aa16.94■□□□□ 0.3
PDCD2-213ENST00000544866 SEMG2Q02383 582 aa16.94■□□□□ 0.3
PDCD2-213ENST00000544866 ELP6Q0PNE2 266 aa16.94■□□□□ 0.3
PDCD2-213ENST00000544866 RALGDSQ12967 914 aa16.94■□□□□ 0.3
PDCD2-213ENST00000544866 ZSCAN30Q86W11 494 aa16.94■□□□□ 0.3
PDCD2-213ENST00000544866 TMEM145Q8NBT3 493 aa16.94■□□□□ 0.3
PDCD2-213ENST00000544866 PDCD6IPQ8WUM4 868 aaKnown RBP16.94■□□□□ 0.3
PDCD2-213ENST00000544866 PIH1D2Q8WWB5 315 aa16.94■□□□□ 0.3
PDCD2-213ENST00000544866 HTR3CQ8WXA8 447 aa16.94■□□□□ 0.3
PDCD2-213ENST00000544866 SERAC1Q96JX3 654 aa16.94■□□□□ 0.3
PDCD2-213ENST00000544866 AGAP3Q96P47 875 aa16.94■□□□□ 0.3
PDCD2-213ENST00000544866 EDEM2Q9BV94 578 aa16.94■□□□□ 0.3
PDCD2-213ENST00000544866 C1QTNF2Q9BXJ5 285 aa16.94■□□□□ 0.3
PDCD2-213ENST00000544866 TDRD1Q9BXT4 1180 aaKnown RBP16.94■□□□□ 0.3
PDCD2-213ENST00000544866 SLC17A9Q9BYT1 436 aa16.94■□□□□ 0.3
PDCD2-213ENST00000544866 C10orf88Q9H8K7 445 aa16.94■□□□□ 0.3
PDCD2-213ENST00000544866 GLOD4Q9HC38 313 aa16.94■□□□□ 0.3
PDCD2-213ENST00000544866 PYCARDQ9ULZ3 195 aa16.94■□□□□ 0.3
PDCD2-213ENST00000544866 PCDHB9Q9Y5E1 797 aa16.94■□□□□ 0.3
PDCD2-213ENST00000544866 A0A1B0GVT2 93 aa16.93■□□□□ 0.3
PDCD2-213ENST00000544866 A0A1W2PQ67 120 aa16.93■□□□□ 0.3
PDCD2-213ENST00000544866 GOLGA6L9A6NEM1 432 aa16.93■□□□□ 0.3
PDCD2-213ENST00000544866 USP27XA6NNY8 438 aa16.93■□□□□ 0.3
PDCD2-213ENST00000544866 H7C0C1 242 aa16.93■□□□□ 0.3
PDCD2-213ENST00000544866 ARHGAP33O14559 1287 aa16.93■□□□□ 0.3
PDCD2-213ENST00000544866 KCNK3O14649 394 aa16.93■□□□□ 0.3
PDCD2-213ENST00000544866 MTSS1O43312 755 aa16.93■□□□□ 0.3
PDCD2-213ENST00000544866 MMP20O60882 483 aa16.93■□□□□ 0.3
PDCD2-213ENST00000544866 PRLP01236 227 aa16.93■□□□□ 0.3
PDCD2-213ENST00000544866 PDHA1P08559 390 aa16.93■□□□□ 0.3
PDCD2-213ENST00000544866 RBP3P10745 1247 aa16.93■□□□□ 0.3
PDCD2-213ENST00000544866 RBL1P28749 1068 aa16.93■□□□□ 0.3
PDCD2-213ENST00000544866 CD68P34810 354 aaPredicted RBP16.93■□□□□ 0.3
PDCD2-213ENST00000544866 CD86P42081 329 aa16.93■□□□□ 0.3
PDCD2-213ENST00000544866 ATP5OP48047 213 aa16.93■□□□□ 0.3
PDCD2-213ENST00000544866 EIF3EP60228 445 aaKnown RBP16.93■□□□□ 0.3
PDCD2-213ENST00000544866 GRIK2Q13002 908 aa16.93■□□□□ 0.3
PDCD2-213ENST00000544866 ARMC12Q5T9G4 340 aa16.93■□□□□ 0.3
PDCD2-213ENST00000544866 SEL1L2Q5TEA6 688 aa16.93■□□□□ 0.3
PDCD2-213ENST00000544866 ERAP2Q6P179 960 aa16.93■□□□□ 0.3
PDCD2-213ENST00000544866 DPPA4Q7L190 304 aa16.93■□□□□ 0.3
PDCD2-213ENST00000544866 ZNF567Q8N184 647 aa16.93■□□□□ 0.3
PDCD2-213ENST00000544866 CXorf40AQ8TE69 158 aa16.93■□□□□ 0.3
PDCD2-213ENST00000544866 ASB12Q8WXK4 309 aa16.93■□□□□ 0.3
PDCD2-213ENST00000544866 TADA1Q96BN2 335 aa16.93■□□□□ 0.3
PDCD2-213ENST00000544866 IMP4Q96G21 291 aaKnown RBP16.93■□□□□ 0.3
PDCD2-213ENST00000544866 MYOCQ99972 504 aa16.93■□□□□ 0.3
PDCD2-213ENST00000544866 WRAP53Q9BUR4 548 aaKnown RBP16.93■□□□□ 0.3
PDCD2-213ENST00000544866 SLC25A51Q9H1U9 297 aa16.93■□□□□ 0.3
PDCD2-213ENST00000544866 FZD3Q9NPG1 666 aa16.93■□□□□ 0.3
PDCD2-213ENST00000544866 AASDHPPTQ9NRN7 309 aa16.93■□□□□ 0.3
PDCD2-213ENST00000544866 TRMT1Q9NXH9 659 aaKnown RBP16.93■□□□□ 0.3
PDCD2-213ENST00000544866 PHTF1Q9UMS5 762 aa16.93■□□□□ 0.3
PDCD2-213ENST00000544866 CA5BQ9Y2D0 317 aa16.93■□□□□ 0.3
PDCD2-213ENST00000544866 R3HDM2Q9Y2K5 976 aaKnown RBP16.93■□□□□ 0.3
PDCD2-213ENST00000544866 PRAMEF26H0Y7S4 382 aa16.92■□□□□ 0.3
PDCD2-213ENST00000544866 CDX4O14627 284 aaPredicted RBP16.92■□□□□ 0.3
PDCD2-213ENST00000544866 RAD51BO15315 384 aa16.92■□□□□ 0.3
PDCD2-213ENST00000544866 PAK4O96013 591 aaPredicted RBP16.92■□□□□ 0.3
PDCD2-213ENST00000544866 SYPP08247 313 aa16.92■□□□□ 0.3
PDCD2-213ENST00000544866 HNRNPA2B1P22626 353 aaKnown RBP16.92■□□□□ 0.3
PDCD2-213ENST00000544866 CD38P28907 300 aa16.92■□□□□ 0.3
PDCD2-213ENST00000544866 FAM193AP78312 1265 aa16.92■□□□□ 0.3
PDCD2-213ENST00000544866 ARHGAP8P85298 464 aa16.92■□□□□ 0.3
PDCD2-213ENST00000544866 TEAD4Q15561 434 aa16.92■□□□□ 0.3
PDCD2-213ENST00000544866 SLC13A5Q86YT5 568 aaPredicted RBP16.92■□□□□ 0.3
PDCD2-213ENST00000544866 CDKL3Q8IVW4 592 aaPredicted RBP16.92■□□□□ 0.3
PDCD2-213ENST00000544866 PAF1Q8N7H5 531 aa16.92■□□□□ 0.3
PDCD2-213ENST00000544866 TTC13Q8NBP0 860 aa16.92■□□□□ 0.3
PDCD2-213ENST00000544866 MCCC1Q96RQ3 725 aaPredicted RBP16.92■□□□□ 0.3
PDCD2-213ENST00000544866 RBM15Q96T37 977 aaKnown RBP eCLIP16.92■□□□□ 0.3
PDCD2-213ENST00000544866 VAT1Q99536 393 aa16.92■□□□□ 0.3
PDCD2-213ENST00000544866 KLF6Q99612 283 aaPredicted RBP16.92■□□□□ 0.3
PDCD2-213ENST00000544866 B4GALT6Q9UBX8 382 aa16.92■□□□□ 0.3
PDCD2-213ENST00000544866 ANKRD6Q9Y2G4 727 aa16.92■□□□□ 0.3
PDCD2-213ENST00000544866 PPIL1Q9Y3C6 166 aa16.92■□□□□ 0.3
PDCD2-213ENST00000544866 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.91■□□□□ 0.3
PDCD2-213ENST00000544866 VILLO15195 856 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms