RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 C10orf142B7Z368 130 aa13.17□□□□□ -0.3
DDX11-227ENST00000544652 DNALI1O14645 258 aaPredicted RBP13.17□□□□□ -0.3
DDX11-227ENST00000544652 ZNF217O75362 1048 aa13.17□□□□□ -0.3
DDX11-227ENST00000544652 NDST3O95803 873 aa13.17□□□□□ -0.3
DDX11-227ENST00000544652 CPP00450 1065 aa13.17□□□□□ -0.3
DDX11-227ENST00000544652 ATXN1LP0C7T5 689 aaKnown RBP13.17□□□□□ -0.3
DDX11-227ENST00000544652 ADRB3P13945 408 aa13.17□□□□□ -0.3
DDX11-227ENST00000544652 TIMP2P16035 220 aa13.17□□□□□ -0.3
DDX11-227ENST00000544652 P2RY2P41231 377 aa13.17□□□□□ -0.3
DDX11-227ENST00000544652 GRIA4P48058 902 aa13.17□□□□□ -0.3
DDX11-227ENST00000544652 VPS41P49754 854 aa13.17□□□□□ -0.3
DDX11-227ENST00000544652 TPMTP51580 245 aa13.17□□□□□ -0.3
DDX11-227ENST00000544652 NEK3P51956 506 aa13.17□□□□□ -0.3
DDX11-227ENST00000544652 BASP1P80723 227 aaKnown RBP13.17□□□□□ -0.3
DDX11-227ENST00000544652 CDK16Q00536 496 aa13.17□□□□□ -0.3
DDX11-227ENST00000544652 CCDC15Q0P6D6 951 aa13.17□□□□□ -0.3
DDX11-227ENST00000544652 CNTN1Q12860 1018 aa13.17□□□□□ -0.3
DDX11-227ENST00000544652 SFSWAPQ12872 951 aaKnown RBP13.17□□□□□ -0.3
DDX11-227ENST00000544652 SLC1A5Q15758 541 aa13.17□□□□□ -0.3
DDX11-227ENST00000544652 PCSK7Q16549 785 aa13.17□□□□□ -0.3
DDX11-227ENST00000544652 UGP2Q16851 508 aa13.17□□□□□ -0.3
DDX11-227ENST00000544652 TMEM31Q5JXX7 168 aa13.17□□□□□ -0.3
DDX11-227ENST00000544652 AGBL4Q5VU57 503 aa13.17□□□□□ -0.3
DDX11-227ENST00000544652 C8orf74Q6P047 294 aa13.17□□□□□ -0.3
DDX11-227ENST00000544652 KIAA1324Q6UXG2 1013 aaKnown RBP13.17□□□□□ -0.3
DDX11-227ENST00000544652 PCGF5Q86SE9 256 aa13.17□□□□□ -0.3
DDX11-227ENST00000544652 HDDC3Q8N4P3 179 aa13.17□□□□□ -0.3
DDX11-227ENST00000544652 IPMKQ8NFU5 416 aa13.17□□□□□ -0.3
DDX11-227ENST00000544652 SEC14L1Q92503 715 aa13.17□□□□□ -0.3
DDX11-227ENST00000544652 CPT1BQ92523 772 aa13.17□□□□□ -0.3
DDX11-227ENST00000544652 RAB7BQ96AH8 199 aa13.17□□□□□ -0.3
DDX11-227ENST00000544652 MCCC1Q96RQ3 725 aaPredicted RBP13.17□□□□□ -0.3
DDX11-227ENST00000544652 ERP44Q9BS26 406 aa13.17□□□□□ -0.3
DDX11-227ENST00000544652 ADGRE3Q9BY15 652 aa13.17□□□□□ -0.3
DDX11-227ENST00000544652 LRRC40Q9H9A6 602 aa13.17□□□□□ -0.3
DDX11-227ENST00000544652 CD93Q9NPY3 652 aa13.17□□□□□ -0.3
DDX11-227ENST00000544652 DYRK4Q9NR20 520 aa13.17□□□□□ -0.3
DDX11-227ENST00000544652 FBXL12Q9NXK8 326 aa13.17□□□□□ -0.3
DDX11-227ENST00000544652 BCCIPQ9P287 314 aaKnown RBP eCLIP13.17□□□□□ -0.3
DDX11-227ENST00000544652 SERGEFQ9UGK8 458 aa13.17□□□□□ -0.3
DDX11-227ENST00000544652 ASIC3Q9UHC3 531 aa13.17□□□□□ -0.3
DDX11-227ENST00000544652 A0A0J9YYE9 177 aa13.16□□□□□ -0.3
DDX11-227ENST00000544652 UPK3BL1B0FP48 263 aa13.16□□□□□ -0.3
DDX11-227ENST00000544652 UPK3BL2E5RIL1 263 aa13.16□□□□□ -0.3
DDX11-227ENST00000544652 AREL1O15033 823 aa13.16□□□□□ -0.3
DDX11-227ENST00000544652 TP73O15350 636 aa13.16□□□□□ -0.3
DDX11-227ENST00000544652 SPINT1O43278 529 aa13.16□□□□□ -0.3
DDX11-227ENST00000544652 PLRG1O43660 514 aaKnown RBP13.16□□□□□ -0.3
DDX11-227ENST00000544652 AP1G1O43747 822 aa13.16□□□□□ -0.3
DDX11-227ENST00000544652 AGTP01019 485 aa13.16□□□□□ -0.3
DDX11-227ENST00000544652 TRBC1P01850 177 aa13.16□□□□□ -0.3
DDX11-227ENST00000544652 APRTP07741 180 aa13.16□□□□□ -0.3
DDX11-227ENST00000544652 ACADMP11310 421 aa13.16□□□□□ -0.3
DDX11-227ENST00000544652 HLA-DPA1P20036 260 aa13.16□□□□□ -0.3
DDX11-227ENST00000544652 ADCY8P40145 1251 aa13.16□□□□□ -0.3
DDX11-227ENST00000544652 ABL2P42684 1182 aa13.16□□□□□ -0.3
DDX11-227ENST00000544652 DRG2P55039 364 aaKnown RBP13.16□□□□□ -0.3
DDX11-227ENST00000544652 TAS2R38P59533 333 aa13.16□□□□□ -0.3
DDX11-227ENST00000544652 MSLNQ13421 630 aaPredicted RBP13.16□□□□□ -0.3
DDX11-227ENST00000544652 QPCTQ16769 361 aa13.16□□□□□ -0.3
DDX11-227ENST00000544652 MAP7D1Q3KQU3 841 aa13.16□□□□□ -0.3
DDX11-227ENST00000544652 ZNF528Q3MIS6 628 aa13.16□□□□□ -0.3
DDX11-227ENST00000544652 POM121L1PQ3SYA9 428 aa13.16□□□□□ -0.3
DDX11-227ENST00000544652 SIRPB2Q5JXA9 342 aa13.16□□□□□ -0.3
DDX11-227ENST00000544652 CFAP58Q5T655 872 aa13.16□□□□□ -0.3
DDX11-227ENST00000544652 RNASEH2BQ5TBB1 312 aaKnown RBP13.16□□□□□ -0.3
DDX11-227ENST00000544652 DUPD1Q68J44 220 aa13.16□□□□□ -0.3
DDX11-227ENST00000544652 NAPEPLDQ6IQ20 393 aa13.16□□□□□ -0.3
DDX11-227ENST00000544652 DENND5AQ6IQ26 1287 aa13.16□□□□□ -0.3
DDX11-227ENST00000544652 FBXL19Q6PCT2 694 aa13.16□□□□□ -0.3
DDX11-227ENST00000544652 TSSK4Q6SA08 328 aa13.16□□□□□ -0.3
DDX11-227ENST00000544652 LINC00523Q86TU6 105 aa13.16□□□□□ -0.3
DDX11-227ENST00000544652 WDR5BQ86VZ2 330 aa13.16□□□□□ -0.3
DDX11-227ENST00000544652 CACUL1Q86Y37 369 aa13.16□□□□□ -0.3
DDX11-227ENST00000544652 PGBD3Q8N328 593 aa13.16□□□□□ -0.3
DDX11-227ENST00000544652 TAB3Q8N5C8 712 aaPredicted RBP13.16□□□□□ -0.3
DDX11-227ENST00000544652 NAT8LQ8N9F0 302 aa13.16□□□□□ -0.3
DDX11-227ENST00000544652 LRRN4CLQ8ND94 238 aa13.16□□□□□ -0.3
DDX11-227ENST00000544652 PDCD6IPQ8WUM4 868 aaKnown RBP13.16□□□□□ -0.3
DDX11-227ENST00000544652 IFT43Q96FT9 208 aa13.16□□□□□ -0.3
DDX11-227ENST00000544652 SCRN2Q96FV2 425 aa13.16□□□□□ -0.3
DDX11-227ENST00000544652 LYSMD1Q96S90 227 aa13.16□□□□□ -0.3
DDX11-227ENST00000544652 OMDQ99983 421 aa13.16□□□□□ -0.3
DDX11-227ENST00000544652 TBL1YQ9BQ87 522 aa13.16□□□□□ -0.3
DDX11-227ENST00000544652 FSD1LQ9BXM9 530 aa13.16□□□□□ -0.3
DDX11-227ENST00000544652 FAM126AQ9BYI3 521 aaPredicted RBP13.16□□□□□ -0.3
DDX11-227ENST00000544652 RAB17Q9H0T7 212 aa13.16□□□□□ -0.3
DDX11-227ENST00000544652 NEUROG2Q9H2A3 272 aa13.16□□□□□ -0.3
DDX11-227ENST00000544652 TPX2Q9ULW0 747 aaKnown RBP13.16□□□□□ -0.3
DDX11-227ENST00000544652 NCKAP1Q9Y2A7 1128 aa13.16□□□□□ -0.3
DDX11-227ENST00000544652 ABCA7Q8IZY2 2146 aa13.15□□□□□ -0.3
DDX11-227ENST00000544652 TCRBV7S3A2A0A539 114 aa13.15□□□□□ -0.3
DDX11-227ENST00000544652 EFCAB8A8MWE9 144 aa13.15□□□□□ -0.3
DDX11-227ENST00000544652 E7EVH7 732 aa13.15□□□□□ -0.3
DDX11-227ENST00000544652 SMAPO00193 183 aa13.15□□□□□ -0.3
DDX11-227ENST00000544652 PLK4O00444 970 aa13.15□□□□□ -0.3
DDX11-227ENST00000544652 AXIN1O15169 862 aa13.15□□□□□ -0.3
DDX11-227ENST00000544652 RNASEH2AO75792 299 aaKnown RBP13.15□□□□□ -0.3
DDX11-227ENST00000544652 SEC31AO94979 1220 aaKnown RBP13.15□□□□□ -0.3
DDX11-227ENST00000544652 FGF1P05230 155 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms