RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	DCAF7	P61962	342 aa		4.37	□□□□□ -1.71
RAP1B-231	ENST00000544639	FOXD4	Q12950	439 aa	Predicted RBP	4.37	□□□□□ -1.71
RAP1B-231	ENST00000544639	CTTN	Q14247	550 aa	Known RBP	4.37	□□□□□ -1.71
RAP1B-231	ENST00000544639	KRT32	Q14532	448 aa		4.37	□□□□□ -1.71
RAP1B-231	ENST00000544639	TCTN1	Q2MV58	587 aa		4.37	□□□□□ -1.71
RAP1B-231	ENST00000544639	ALG11	Q2TAA5	492 aa		4.37	□□□□□ -1.71
RAP1B-231	ENST00000544639	SGO1	Q5FBB7	561 aa		4.37	□□□□□ -1.71
RAP1B-231	ENST00000544639	FSCB	Q5H9T9	825 aa		4.37	□□□□□ -1.71
RAP1B-231	ENST00000544639	CPLX4	Q7Z7G2	160 aa		4.37	□□□□□ -1.71
RAP1B-231	ENST00000544639	CCDC105	Q8IYK2	499 aa		4.37	□□□□□ -1.71
RAP1B-231	ENST00000544639	FBXL8	Q96CD0	374 aa		4.37	□□□□□ -1.71
RAP1B-231	ENST00000544639	PERP	Q96FX8	193 aa		4.37	□□□□□ -1.71
RAP1B-231	ENST00000544639	PRKRIP1	Q9H875	184 aa	Predicted RBP	4.37	□□□□□ -1.71
RAP1B-231	ENST00000544639	DDX4	Q9NQI0	724 aa	Known RBP	4.37	□□□□□ -1.71
RAP1B-231	ENST00000544639	TMEM51	Q9NW97	253 aa		4.37	□□□□□ -1.71
RAP1B-231	ENST00000544639	INTS6	Q9UL03	887 aa	Known RBP	4.37	□□□□□ -1.71
RAP1B-231	ENST00000544639	MKLN1	Q9UL63	735 aa		4.37	□□□□□ -1.71
RAP1B-231	ENST00000544639	LSM4	Q9Y4Z0	139 aa	Known RBP	4.37	□□□□□ -1.71
RAP1B-231	ENST00000544639	PTGDR2	Q9Y5Y4	395 aa		4.37	□□□□□ -1.71
RAP1B-231	ENST00000544639	ITIH6	Q6UXX5	1313 aa		4.37	□□□□□ -1.71
RAP1B-231	ENST00000544639	TDRD9	Q8NDG6	1382 aa	Known RBP	4.37	□□□□□ -1.71
RAP1B-231	ENST00000544639	IGHV4-28	A0A0C4DH34	117 aa		4.36	□□□□□ -1.71
RAP1B-231	ENST00000544639	PGPEP1L	A6NFU8	196 aa		4.36	□□□□□ -1.71
RAP1B-231	ENST00000544639	OR6C75	A6NL08	312 aa		4.36	□□□□□ -1.71
RAP1B-231	ENST00000544639	USP17L23	D6RBM5	183 aa		4.36	□□□□□ -1.71
RAP1B-231	ENST00000544639	SNAP23	O00161	211 aa		4.36	□□□□□ -1.71
RAP1B-231	ENST00000544639	ITM2A	O43736	263 aa		4.36	□□□□□ -1.71
RAP1B-231	ENST00000544639	USO1	O60763	962 aa	Known RBP	4.36	□□□□□ -1.71
RAP1B-231	ENST00000544639	MMP2	P08253	660 aa		4.36	□□□□□ -1.71
RAP1B-231	ENST00000544639	SPARC	P09486	303 aa		4.36	□□□□□ -1.71
RAP1B-231	ENST00000544639	PSMA4	P25789	261 aa	Known RBP	4.36	□□□□□ -1.71
RAP1B-231	ENST00000544639	CHAT	P28329	748 aa		4.36	□□□□□ -1.71
RAP1B-231	ENST00000544639	HOXD3	P31249	432 aa	Predicted RBP	4.36	□□□□□ -1.71
RAP1B-231	ENST00000544639	SHMT1	P34896	483 aa		4.36	□□□□□ -1.71
RAP1B-231	ENST00000544639	NUDT6	P53370	316 aa		4.36	□□□□□ -1.71
RAP1B-231	ENST00000544639	RARS	P54136	660 aa	Known RBP	4.36	□□□□□ -1.71
RAP1B-231	ENST00000544639	RPS3A	P61247	264 aa	Known RBP	4.36	□□□□□ -1.71
RAP1B-231	ENST00000544639	OLR1	P78380	273 aa		4.36	□□□□□ -1.71
RAP1B-231	ENST00000544639	ABAT	P80404	500 aa		4.36	□□□□□ -1.71
RAP1B-231	ENST00000544639		Q0VFX4	171 aa		4.36	□□□□□ -1.71
RAP1B-231	ENST00000544639	TMEM115	Q12893	351 aa	Predicted RBP	4.36	□□□□□ -1.71
RAP1B-231	ENST00000544639	SHB	Q15464	509 aa		4.36	□□□□□ -1.71
RAP1B-231	ENST00000544639	MAPRE1	Q15691	268 aa	Known RBP	4.36	□□□□□ -1.71
RAP1B-231	ENST00000544639	HAUS3	Q68CZ6	603 aa		4.36	□□□□□ -1.71
RAP1B-231	ENST00000544639	ZNF549	Q6P9A3	640 aa		4.36	□□□□□ -1.71
RAP1B-231	ENST00000544639	LCTL	Q6UWM7	567 aa		4.36	□□□□□ -1.71
RAP1B-231	ENST00000544639	C9orf47	Q6ZRZ4	202 aa		4.36	□□□□□ -1.71
RAP1B-231	ENST00000544639	PXK	Q7Z7A4	578 aa		4.36	□□□□□ -1.71
RAP1B-231	ENST00000544639	SLC35F3	Q8IY50	421 aa		4.36	□□□□□ -1.71
RAP1B-231	ENST00000544639	PRR26	Q8N8Z3	221 aa		4.36	□□□□□ -1.71
RAP1B-231	ENST00000544639		Q8N9P0	234 aa	Predicted RBP	4.36	□□□□□ -1.71
RAP1B-231	ENST00000544639	ANKRD52	Q8NB46	1076 aa		4.36	□□□□□ -1.71
RAP1B-231	ENST00000544639	NEXN-AS1	Q8NBZ9	246 aa		4.36	□□□□□ -1.71
RAP1B-231	ENST00000544639	ARRDC2	Q8TBH0	407 aa		4.36	□□□□□ -1.71
RAP1B-231	ENST00000544639	NSMCE1	Q8WV22	266 aa		4.36	□□□□□ -1.71
RAP1B-231	ENST00000544639	OIT3	Q8WWZ8	545 aa		4.36	□□□□□ -1.71
RAP1B-231	ENST00000544639	GTF3C6	Q969F1	213 aa		4.36	□□□□□ -1.71
RAP1B-231	ENST00000544639	INTS12	Q96CB8	462 aa	Known RBP	4.36	□□□□□ -1.71
RAP1B-231	ENST00000544639	SF3B5	Q9BWJ5	86 aa	Known RBP	4.36	□□□□□ -1.71
RAP1B-231	ENST00000544639	STRA6	Q9BX79	667 aa		4.36	□□□□□ -1.71
RAP1B-231	ENST00000544639	TKTL2	Q9H0I9	626 aa		4.36	□□□□□ -1.71
RAP1B-231	ENST00000544639	MRPL44	Q9H9J2	332 aa	Known RBP	4.36	□□□□□ -1.71
RAP1B-231	ENST00000544639	SCPEP1	Q9HB40	452 aa		4.36	□□□□□ -1.71
RAP1B-231	ENST00000544639	MAGEE1	Q9HCI5	957 aa		4.36	□□□□□ -1.71
RAP1B-231	ENST00000544639	SLC6A13	Q9NSD5	602 aa		4.36	□□□□□ -1.71
RAP1B-231	ENST00000544639	PLK2	Q9NYY3	685 aa		4.36	□□□□□ -1.71
RAP1B-231	ENST00000544639	SLC45A1	Q9Y2W3	748 aa		4.36	□□□□□ -1.71
RAP1B-231	ENST00000544639	NFE2L3	Q9Y4A8	694 aa		4.36	□□□□□ -1.71
RAP1B-231	ENST00000544639	PIAS3	Q9Y6X2	628 aa		4.36	□□□□□ -1.71
RAP1B-231	ENST00000544639	TIMM23	O14925	209 aa		4.35	□□□□□ -1.71
RAP1B-231	ENST00000544639	ASAP2	O43150	1006 aa		4.35	□□□□□ -1.71
RAP1B-231	ENST00000544639	SEC14L5	O43304	696 aa		4.35	□□□□□ -1.71
RAP1B-231	ENST00000544639	PAGE4	O60829	102 aa		4.35	□□□□□ -1.71
RAP1B-231	ENST00000544639	NDUFB4	O95168	129 aa		4.35	□□□□□ -1.71
RAP1B-231	ENST00000544639	CCNDBP1	O95273	360 aa		4.35	□□□□□ -1.71
RAP1B-231	ENST00000544639	ITGAD	Q13349	1161 aa		4.35	□□□□□ -1.71
RAP1B-231	ENST00000544639	ERV3-1	Q14264	604 aa		4.35	□□□□□ -1.71
RAP1B-231	ENST00000544639	FGFBP1	Q14512	234 aa		4.35	□□□□□ -1.71
RAP1B-231	ENST00000544639	CCNG2	Q16589	344 aa		4.35	□□□□□ -1.71
RAP1B-231	ENST00000544639	GPATCH4	Q5T3I0	446 aa	Known RBP	4.35	□□□□□ -1.71
RAP1B-231	ENST00000544639	CCDC30	Q5VVM6	783 aa		4.35	□□□□□ -1.71
RAP1B-231	ENST00000544639	CCDC129	Q6ZRS4	1044 aa		4.35	□□□□□ -1.71
RAP1B-231	ENST00000544639	BHLHA9	Q7RTU4	235 aa		4.35	□□□□□ -1.71
RAP1B-231	ENST00000544639	ADSSL1	Q8N142	457 aa		4.35	□□□□□ -1.71
RAP1B-231	ENST00000544639	ZCCHC9	Q8N567	271 aa	Known RBP	4.35	□□□□□ -1.71
RAP1B-231	ENST00000544639	BEST2	Q8NFU1	509 aa		4.35	□□□□□ -1.71
RAP1B-231	ENST00000544639	NEK9	Q8TD19	979 aa		4.35	□□□□□ -1.71
RAP1B-231	ENST00000544639	PSPC1	Q8WXF1	523 aa	Known RBP	4.35	□□□□□ -1.71
RAP1B-231	ENST00000544639	ADAMTS14	Q8WXS8	1223 aa		4.35	□□□□□ -1.71
RAP1B-231	ENST00000544639	TRIB2	Q92519	343 aa		4.35	□□□□□ -1.71
RAP1B-231	ENST00000544639	ERGIC1	Q969X5	290 aa		4.35	□□□□□ -1.71
RAP1B-231	ENST00000544639	EBF3	Q9H4W6	596 aa		4.35	□□□□□ -1.71
RAP1B-231	ENST00000544639	BPIFA1	Q9NP55	256 aa		4.35	□□□□□ -1.71
RAP1B-231	ENST00000544639	ASAH2	Q9NR71	780 aa		4.35	□□□□□ -1.71
RAP1B-231	ENST00000544639	CISD1	Q9NZ45	108 aa	Known RBP	4.35	□□□□□ -1.71
RAP1B-231	ENST00000544639	OR6C3	Q9NZP0	311 aa		4.35	□□□□□ -1.71
RAP1B-231	ENST00000544639	ABI3	Q9P2A4	366 aa		4.35	□□□□□ -1.71
RAP1B-231	ENST00000544639	HAO1	Q9UJM8	370 aa		4.35	□□□□□ -1.71
RAP1B-231	ENST00000544639	PNMA2	Q9UL42	364 aa		4.35	□□□□□ -1.71
RAP1B-231	ENST00000544639	PCDHA7	Q9UN72	937 aa		4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms