RNA–Protein interactions for RNA: ENST00000544588.1

CIT-214, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-214ENST00000544588 IL4RP24394 825 aa13.25□□□□□ -0.29
CIT-214ENST00000544588 HSPA9P38646 679 aaKnown RBP13.25□□□□□ -0.29
CIT-214ENST00000544588 MMP13P45452 471 aa13.25□□□□□ -0.29
CIT-214ENST00000544588 EIF2B5Q13144 721 aaKnown RBP13.25□□□□□ -0.29
CIT-214ENST00000544588 DPYSL3Q14195 570 aa13.25□□□□□ -0.29
CIT-214ENST00000544588 PDK2Q15119 407 aa13.25□□□□□ -0.29
CIT-214ENST00000544588 IRF4Q15306 451 aa13.25□□□□□ -0.29
CIT-214ENST00000544588 TCEA2Q15560 299 aa13.25□□□□□ -0.29
CIT-214ENST00000544588 SMAD1Q15797 465 aaKnown RBP13.25□□□□□ -0.29
CIT-214ENST00000544588 ASTE1Q2TB18 679 aaPredicted RBP13.25□□□□□ -0.29
CIT-214ENST00000544588 WSCD2Q2TBF2 565 aa13.25□□□□□ -0.29
CIT-214ENST00000544588 PROX2Q3B8N5 592 aa13.25□□□□□ -0.29
CIT-214ENST00000544588 ODF2Q5BJF6 829 aa13.25□□□□□ -0.29
CIT-214ENST00000544588 TPRG1LQ5T0D9 272 aa13.25□□□□□ -0.29
CIT-214ENST00000544588 DENND2CQ68D51 928 aa13.25□□□□□ -0.29
CIT-214ENST00000544588 ENPP7Q6UWV6 458 aa13.25□□□□□ -0.29
CIT-214ENST00000544588 RD3Q7Z3Z2 195 aa13.25□□□□□ -0.29
CIT-214ENST00000544588 TMPRSS12Q86WS5 348 aa13.25□□□□□ -0.29
CIT-214ENST00000544588 TP53I13Q8NBR0 393 aaPredicted RBP13.25□□□□□ -0.29
CIT-214ENST00000544588 OR4C6Q8NH72 309 aa13.25□□□□□ -0.29
CIT-214ENST00000544588 SLC35G2Q8TBE7 412 aa13.25□□□□□ -0.29
CIT-214ENST00000544588 BTN2A2Q8WVV5 523 aa13.25□□□□□ -0.29
CIT-214ENST00000544588 TSC1Q92574 1164 aa13.25□□□□□ -0.29
CIT-214ENST00000544588 IL12RB2Q99665 862 aa13.25□□□□□ -0.29
CIT-214ENST00000544588 ANP32EQ9BTT0 268 aa13.25□□□□□ -0.29
CIT-214ENST00000544588 DUSP23Q9BVJ7 150 aa13.25□□□□□ -0.29
CIT-214ENST00000544588 SLC13A1Q9BZW2 595 aa13.25□□□□□ -0.29
CIT-214ENST00000544588 NT5MQ9NPB1 228 aa13.25□□□□□ -0.29
CIT-214ENST00000544588 RCOR3Q9P2K3 495 aaPredicted RBP13.25□□□□□ -0.29
CIT-214ENST00000544588 SPASTQ9UBP0 616 aa13.25□□□□□ -0.29
CIT-214ENST00000544588 KLF15Q9UIH9 416 aa13.25□□□□□ -0.29
CIT-214ENST00000544588 NENFQ9UMX5 172 aa13.25□□□□□ -0.29
CIT-214ENST00000544588 DOLKQ9UPQ8 538 aa13.25□□□□□ -0.29
CIT-214ENST00000544588 TTLL3Q9Y4R7 772 aa13.25□□□□□ -0.29
CIT-214ENST00000544588 CABIN1Q9Y6J0 2220 aa13.25□□□□□ -0.29
CIT-214ENST00000544588 CEP192Q8TEP8 1941 aa13.25□□□□□ -0.29
CIT-214ENST00000544588 CHD8Q9HCK8 2581 aa13.24□□□□□ -0.29
CIT-214ENST00000544588 K7ESM1 405 aa13.24□□□□□ -0.29
CIT-214ENST00000544588 AQP9O43315 295 aa13.24□□□□□ -0.29
CIT-214ENST00000544588 MFSD11O43934 449 aa13.24□□□□□ -0.29
CIT-214ENST00000544588 ELFN1P0C7U0 828 aa13.24□□□□□ -0.29
CIT-214ENST00000544588 CTSEP14091 401 aa13.24□□□□□ -0.29
CIT-214ENST00000544588 HTR1BP28222 390 aa13.24□□□□□ -0.29
CIT-214ENST00000544588 HNF1BP35680 557 aa13.24□□□□□ -0.29
CIT-214ENST00000544588 YPEL5P62699 121 aa13.24□□□□□ -0.29
CIT-214ENST00000544588 PPARDQ03181 441 aa13.24□□□□□ -0.29
CIT-214ENST00000544588 ILKQ13418 452 aa13.24□□□□□ -0.29
CIT-214ENST00000544588 INPP5AQ14642 412 aa13.24□□□□□ -0.29
CIT-214ENST00000544588 ACOX1Q15067 660 aa13.24□□□□□ -0.29
CIT-214ENST00000544588 DEFB133Q30KQ1 61 aa13.24□□□□□ -0.29
CIT-214ENST00000544588 ANKRD20A8PQ5CZ79 823 aa13.24□□□□□ -0.29
CIT-214ENST00000544588 PRRT3Q5FWE3 981 aa13.24□□□□□ -0.29
CIT-214ENST00000544588 HES3Q5TGS1 186 aa13.24□□□□□ -0.29
CIT-214ENST00000544588 HID1Q8IV36 788 aa13.24□□□□□ -0.29
CIT-214ENST00000544588 CNGA4Q8IV77 575 aa13.24□□□□□ -0.29
CIT-214ENST00000544588 PHACTR4Q8IZ21 702 aa13.24□□□□□ -0.29
CIT-214ENST00000544588 RBFAQ8N0V3 343 aa13.24□□□□□ -0.29
CIT-214ENST00000544588 ZNF548Q8NEK5 533 aaPredicted RBP13.24□□□□□ -0.29
CIT-214ENST00000544588 PCDH19Q8TAB3 1148 aa13.24□□□□□ -0.29
CIT-214ENST00000544588 MDM1Q8TC05 714 aa13.24□□□□□ -0.29
CIT-214ENST00000544588 APOLD1Q96LR9 279 aa13.24□□□□□ -0.29
CIT-214ENST00000544588 MAK16Q9BXY0 300 aaKnown RBP13.24□□□□□ -0.29
CIT-214ENST00000544588 TCEAL2Q9H3H9 227 aaPredicted RBP13.24□□□□□ -0.29
CIT-214ENST00000544588 NOD2Q9HC29 1040 aa13.24□□□□□ -0.29
CIT-214ENST00000544588 EVA1BQ9NVM1 165 aa13.24□□□□□ -0.29
CIT-214ENST00000544588 NLGN3Q9NZ94 848 aa13.24□□□□□ -0.29
CIT-214ENST00000544588 APOBEC3BQ9UH17 382 aaKnown RBP13.24□□□□□ -0.29
CIT-214ENST00000544588 LCMT1Q9UIC8 334 aa13.24□□□□□ -0.29
CIT-214ENST00000544588 OR1A2Q9Y585 309 aa13.24□□□□□ -0.29
CIT-214ENST00000544588 CPED1A4D0V7 1026 aa13.23□□□□□ -0.29
CIT-214ENST00000544588 TRAFD1O14545 582 aaPredicted RBP13.23□□□□□ -0.29
CIT-214ENST00000544588 RECQL5O94762 991 aaPredicted RBP13.23□□□□□ -0.29
CIT-214ENST00000544588 PEX11BO96011 259 aa13.23□□□□□ -0.29
CIT-214ENST00000544588 CPP00450 1065 aa13.23□□□□□ -0.29
CIT-214ENST00000544588 ANXA6P08133 673 aa13.23□□□□□ -0.29
CIT-214ENST00000544588 MMP12P39900 470 aa13.23□□□□□ -0.29
CIT-214ENST00000544588 NOP2P46087 812 aaKnown RBP13.23□□□□□ -0.29
CIT-214ENST00000544588 DUSP3P51452 185 aaPredicted RBP13.23□□□□□ -0.29
CIT-214ENST00000544588 ARSEP51690 589 aa13.23□□□□□ -0.29
CIT-214ENST00000544588 E2F1Q01094 437 aa13.23□□□□□ -0.29
CIT-214ENST00000544588 CYP4F3Q08477 520 aa13.23□□□□□ -0.29
CIT-214ENST00000544588 TARDBPQ13148 414 aaKnown RBP eCLIP13.23□□□□□ -0.29
CIT-214ENST00000544588 NCBP2-AS2Q69YL0 99 aa13.23□□□□□ -0.29
CIT-214ENST00000544588 LIPIQ6XZB0 460 aa13.23□□□□□ -0.29
CIT-214ENST00000544588 LRRC49Q8IUZ0 686 aa13.23□□□□□ -0.29
CIT-214ENST00000544588 PGBD5Q8N414 524 aa13.23□□□□□ -0.29
CIT-214ENST00000544588 CCNYQ8ND76 341 aa13.23□□□□□ -0.29
CIT-214ENST00000544588 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.23□□□□□ -0.29
CIT-214ENST00000544588 LRRN4Q8WUT4 740 aa13.23□□□□□ -0.29
CIT-214ENST00000544588 RAPGEF5Q92565 580 aa13.23□□□□□ -0.29
CIT-214ENST00000544588 TSACCQ96A04 125 aaPredicted RBP13.23□□□□□ -0.29
CIT-214ENST00000544588 ECHDC3Q96DC8 303 aa13.23□□□□□ -0.29
CIT-214ENST00000544588 NSMCE3Q96MG7 304 aa13.23□□□□□ -0.29
CIT-214ENST00000544588 NUDCD1Q96RS6 583 aa13.23□□□□□ -0.29
CIT-214ENST00000544588 MGME1Q9BQP7 344 aa13.23□□□□□ -0.29
CIT-214ENST00000544588 ZNF670Q9BS34 389 aa13.23□□□□□ -0.29
CIT-214ENST00000544588 APOOQ9BUR5 198 aa13.23□□□□□ -0.29
CIT-214ENST00000544588 ABCG4Q9H172 646 aa13.23□□□□□ -0.29
CIT-214ENST00000544588 GPR27Q9NS67 375 aa13.23□□□□□ -0.29
CIT-214ENST00000544588 RBM22Q9NW64 420 aaKnown RBP eCLIP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms