RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 ZSCAN32Q9NX65 697 aa12.86□□□□□ -0.35
CHD4-211ENST00000544484 NTSP30990 170 aa12.86□□□□□ -0.35
CHD4-211ENST00000544484 ARCQ7LC44 396 aa12.86□□□□□ -0.35
CHD4-211ENST00000544484 SLC4A11Q8NBS3 891 aa12.86□□□□□ -0.35
CHD4-211ENST00000544484 NKX2-3Q8TAU0 364 aa12.86□□□□□ -0.35
CHD4-211ENST00000544484 AGAP11Q8TF27 550 aa12.86□□□□□ -0.35
CHD4-211ENST00000544484 ZNF384Q8TF68 577 aa12.86□□□□□ -0.35
CHD4-211ENST00000544484 ATL1Q8WXF7 558 aa12.86□□□□□ -0.35
CHD4-211ENST00000544484 RORBQ92753 470 aa12.86□□□□□ -0.35
CHD4-211ENST00000544484 KLHL1Q9NR64 748 aa12.86□□□□□ -0.35
CHD4-211ENST00000544484 CHRAC1Q9NRG0 131 aa12.86□□□□□ -0.35
CHD4-211ENST00000544484 ATP6V1C1P21283 382 aa12.86□□□□□ -0.35
CHD4-211ENST00000544484 CORO1AP31146 461 aaKnown RBP12.86□□□□□ -0.35
CHD4-211ENST00000544484 GLUD2P49448 558 aa12.86□□□□□ -0.35
CHD4-211ENST00000544484 FASTKD3Q14CZ7 662 aaKnown RBP12.86□□□□□ -0.35
CHD4-211ENST00000544484 GPR158Q5T848 1215 aa12.86□□□□□ -0.35
CHD4-211ENST00000544484 OR4K2Q8NGD2 314 aa12.86□□□□□ -0.35
CHD4-211ENST00000544484 MIEF2Q96C03 454 aa12.86□□□□□ -0.35
CHD4-211ENST00000544484 BTN2A3PQ96KV6 586 aa12.86□□□□□ -0.35
CHD4-211ENST00000544484 ZNF184Q99676 751 aaPredicted RBP12.86□□□□□ -0.35
CHD4-211ENST00000544484 CACNG4Q9UBN1 327 aa12.86□□□□□ -0.35
CHD4-211ENST00000544484 TNFAIP8O95379 198 aa12.85□□□□□ -0.35
CHD4-211ENST00000544484 PPM1AP35813 382 aa12.85□□□□□ -0.35
CHD4-211ENST00000544484 GABRB2P47870 512 aa12.85□□□□□ -0.35
CHD4-211ENST00000544484 RNF43Q68DV7 783 aa12.85□□□□□ -0.35
CHD4-211ENST00000544484 ADAMTSL2Q86TH1 951 aa12.85□□□□□ -0.35
CHD4-211ENST00000544484 CCDC185Q8N715 623 aa12.85□□□□□ -0.35
CHD4-211ENST00000544484 MFSD1Q9H3U5 465 aa12.85□□□□□ -0.35
CHD4-211ENST00000544484 ASF1AQ9Y294 204 aa12.85□□□□□ -0.35
CHD4-211ENST00000544484 RGSL1A5PLK6 1076 aa12.85□□□□□ -0.35
CHD4-211ENST00000544484 CCL22O00626 93 aa12.85□□□□□ -0.35
CHD4-211ENST00000544484 KRT36O76013 467 aa12.85□□□□□ -0.35
CHD4-211ENST00000544484 BCL10O95999 233 aa12.85□□□□□ -0.35
CHD4-211ENST00000544484 IFNA16P05015 189 aa12.85□□□□□ -0.35
CHD4-211ENST00000544484 FYNP06241 537 aa12.85□□□□□ -0.35
CHD4-211ENST00000544484 MSX2P35548 267 aaPredicted RBP12.85□□□□□ -0.35
CHD4-211ENST00000544484 FNBP1LQ5T0N5 605 aa12.85□□□□□ -0.35
CHD4-211ENST00000544484 HEATR4Q86WZ0 1026 aa12.85□□□□□ -0.35
CHD4-211ENST00000544484 DQX1Q8TE96 717 aaKnown RBP12.85□□□□□ -0.35
CHD4-211ENST00000544484 STARD8Q92502 1023 aa12.85□□□□□ -0.35
CHD4-211ENST00000544484 AASDHPPTQ9NRN7 309 aa12.85□□□□□ -0.35
CHD4-211ENST00000544484 ATXN2Q99700 1313 aaKnown RBP12.85□□□□□ -0.35
CHD4-211ENST00000544484 ISM1B1AKI9 464 aa12.85□□□□□ -0.35
CHD4-211ENST00000544484 AZIN1O14977 448 aa12.85□□□□□ -0.35
CHD4-211ENST00000544484 FTH1P02794 183 aa12.85□□□□□ -0.35
CHD4-211ENST00000544484 C2P06681 752 aa12.85□□□□□ -0.35
CHD4-211ENST00000544484 ELFN1P0C7U0 828 aa12.85□□□□□ -0.35
CHD4-211ENST00000544484 PSMA3P25788 255 aa12.85□□□□□ -0.35
CHD4-211ENST00000544484 RASGEF1CQ8N431 466 aa12.85□□□□□ -0.35
CHD4-211ENST00000544484 CYLDQ9NQC7 956 aa12.85□□□□□ -0.35
CHD4-211ENST00000544484 MTF2Q9Y483 593 aaPredicted RBP12.85□□□□□ -0.35
CHD4-211ENST00000544484 PCDHA2Q9Y5H9 948 aa12.85□□□□□ -0.35
CHD4-211ENST00000544484 ERAL1O75616 437 aaKnown RBP12.85□□□□□ -0.35
CHD4-211ENST00000544484 CDKN2BP42772 138 aa12.85□□□□□ -0.35
CHD4-211ENST00000544484 MAPK11Q15759 364 aa12.85□□□□□ -0.35
CHD4-211ENST00000544484 INAQ16352 499 aa12.85□□□□□ -0.35
CHD4-211ENST00000544484 TEKT5Q96M29 485 aa12.85□□□□□ -0.35
CHD4-211ENST00000544484 QRFPRQ96P65 431 aa12.85□□□□□ -0.35
CHD4-211ENST00000544484 APOBEC3GQ9HC16 384 aaKnown RBP12.85□□□□□ -0.35
CHD4-211ENST00000544484 XPNPEP1Q9NQW7 623 aa12.85□□□□□ -0.35
CHD4-211ENST00000544484 LEF1Q9UJU2 399 aaPredicted RBP12.85□□□□□ -0.35
CHD4-211ENST00000544484 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.85□□□□□ -0.35
CHD4-211ENST00000544484 C2orf71A6NGG8 1288 aa12.85□□□□□ -0.35
CHD4-211ENST00000544484 CCL16O15467 120 aa12.85□□□□□ -0.35
CHD4-211ENST00000544484 SGTAO43765 313 aa12.85□□□□□ -0.35
CHD4-211ENST00000544484 SELPP16109 830 aa12.85□□□□□ -0.35
CHD4-211ENST00000544484 CREMQ03060 361 aa12.85□□□□□ -0.35
CHD4-211ENST00000544484 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.85□□□□□ -0.35
CHD4-211ENST00000544484 CIR1Q86X95 450 aaPredicted RBP12.85□□□□□ -0.35
CHD4-211ENST00000544484 PCED1BQ96HM7 432 aa12.85□□□□□ -0.35
CHD4-211ENST00000544484 PPP3R2Q96LZ3 170 aa12.85□□□□□ -0.35
CHD4-211ENST00000544484 WDR55Q9H6Y2 383 aaPredicted RBP12.85□□□□□ -0.35
CHD4-211ENST00000544484 RNPEPL1Q9HAU8 725 aa12.85□□□□□ -0.35
CHD4-211ENST00000544484 EVLQ9UI08 416 aaPredicted RBP12.85□□□□□ -0.35
CHD4-211ENST00000544484 LYVE1Q9Y5Y7 322 aa12.85□□□□□ -0.35
CHD4-211ENST00000544484 LMO2P25791 158 aa12.85□□□□□ -0.35
CHD4-211ENST00000544484 WASP42768 502 aa12.85□□□□□ -0.35
CHD4-211ENST00000544484 FAM180AQ6UWF9 173 aa12.85□□□□□ -0.35
CHD4-211ENST00000544484 ZNF605Q86T29 641 aa12.85□□□□□ -0.35
CHD4-211ENST00000544484 SPATA22Q8NHS9 363 aa12.85□□□□□ -0.35
CHD4-211ENST00000544484 LPIN3Q9BQK8 851 aa12.85□□□□□ -0.35
CHD4-211ENST00000544484 GRIP2Q9C0E4 1043 aa12.85□□□□□ -0.35
CHD4-211ENST00000544484 ATAD3AQ9NVI7 634 aa12.85□□□□□ -0.35
CHD4-211ENST00000544484 EGFL7Q9UHF1 273 aa12.85□□□□□ -0.35
CHD4-211ENST00000544484 MYBPHLA2RUH7 354 aa12.84□□□□□ -0.35
CHD4-211ENST00000544484 TMEM88BA6NKF7 163 aa12.84□□□□□ -0.35
CHD4-211ENST00000544484 E9PAM4 449 aa12.84□□□□□ -0.35
CHD4-211ENST00000544484 FSBPO95073 299 aa12.84□□□□□ -0.35
CHD4-211ENST00000544484 PAX3P23760 479 aa12.84□□□□□ -0.35
CHD4-211ENST00000544484 CSNK2BP67870 215 aa12.84□□□□□ -0.35
CHD4-211ENST00000544484 FBXO48Q5FWF7 155 aa12.84□□□□□ -0.35
CHD4-211ENST00000544484 ARMCX4Q5H9R4 360 aa12.84□□□□□ -0.35
CHD4-211ENST00000544484 INTS6LQ5JSJ4 861 aaKnown RBP12.84□□□□□ -0.35
CHD4-211ENST00000544484 SPRYD7Q5W111 196 aa12.84□□□□□ -0.35
CHD4-211ENST00000544484 SETD9Q8NE22 299 aa12.84□□□□□ -0.35
CHD4-211ENST00000544484 MYO19Q96H55 970 aa12.84□□□□□ -0.35
CHD4-211ENST00000544484 KLHL3Q9UH77 587 aa12.84□□□□□ -0.35
CHD4-211ENST00000544484 A0A088AWK7 358 aa12.84□□□□□ -0.35
CHD4-211ENST00000544484 KPNA5O15131 536 aa12.84□□□□□ -0.35
CHD4-211ENST00000544484 MAGEC1O60732 1142 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms