RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 CILP2Q8IUL8 1156 aa6.59□□□□□ -1.35
PTPRO-208ENST00000542557 AFAP1L2Q8N4X5 818 aa6.59□□□□□ -1.35
PTPRO-208ENST00000542557 ARRDC2Q8TBH0 407 aa6.59□□□□□ -1.35
PTPRO-208ENST00000542557 SLC26A7Q8TE54 656 aa6.59□□□□□ -1.35
PTPRO-208ENST00000542557 PPP2R3CQ969Q6 453 aa6.59□□□□□ -1.35
PTPRO-208ENST00000542557 CCDC124Q96CT7 223 aaKnown RBP6.59□□□□□ -1.35
PTPRO-208ENST00000542557 OLFM1Q99784 485 aa6.59□□□□□ -1.35
PTPRO-208ENST00000542557 TRMOQ9BU70 441 aa6.59□□□□□ -1.35
PTPRO-208ENST00000542557 ATXN3LQ9H3M9 355 aa6.59□□□□□ -1.35
PTPRO-208ENST00000542557 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.59□□□□□ -1.35
PTPRO-208ENST00000542557 VWA8A3KMH1 1905 aa6.59□□□□□ -1.35
PTPRO-208ENST00000542557 BPTFQ12830 3046 aa6.59□□□□□ -1.35
PTPRO-208ENST00000542557 LOC285095A0A1B0GVY8 99 aa6.59□□□□□ -1.36
PTPRO-208ENST00000542557 DPPA5A6NC42 116 aa6.59□□□□□ -1.36
PTPRO-208ENST00000542557 J3KR12 359 aa6.59□□□□□ -1.36
PTPRO-208ENST00000542557 AURKAO14965 403 aa6.59□□□□□ -1.36
PTPRO-208ENST00000542557 PEX1O43933 1283 aa6.59□□□□□ -1.36
PTPRO-208ENST00000542557 ZMPSTE24O75844 475 aa6.59□□□□□ -1.36
PTPRO-208ENST00000542557 IPO13O94829 963 aaKnown RBP6.59□□□□□ -1.36
PTPRO-208ENST00000542557 ATXN1LP0C7T5 689 aaKnown RBP6.59□□□□□ -1.36
PTPRO-208ENST00000542557 CKBP12277 381 aa6.59□□□□□ -1.36
PTPRO-208ENST00000542557 SP100P23497 879 aaPredicted RBP6.59□□□□□ -1.36
PTPRO-208ENST00000542557 CCND3P30281 292 aaPredicted RBP6.59□□□□□ -1.36
PTPRO-208ENST00000542557 GPR15P49685 360 aa6.59□□□□□ -1.36
PTPRO-208ENST00000542557 PGGT1BP53609 377 aa6.59□□□□□ -1.36
PTPRO-208ENST00000542557 INHBCP55103 352 aa6.59□□□□□ -1.36
PTPRO-208ENST00000542557 USP46P62068 366 aa6.59□□□□□ -1.36
PTPRO-208ENST00000542557 NFKB2Q00653 900 aa6.59□□□□□ -1.36
PTPRO-208ENST00000542557 SULT2A1Q06520 285 aa6.59□□□□□ -1.36
PTPRO-208ENST00000542557 PEX6Q13608 980 aa6.59□□□□□ -1.36
PTPRO-208ENST00000542557 DDR2Q16832 855 aa6.59□□□□□ -1.36
PTPRO-208ENST00000542557 ALFQ53S48 1182 aa6.59□□□□□ -1.36
PTPRO-208ENST00000542557 BNC2Q6ZN30 1099 aaPredicted RBP6.59□□□□□ -1.36
PTPRO-208ENST00000542557 RNF111Q6ZNA4 994 aa6.59□□□□□ -1.36
PTPRO-208ENST00000542557 CHSY3Q70JA7 882 aa6.59□□□□□ -1.36
PTPRO-208ENST00000542557 TFAP2DQ7Z6R9 452 aa6.59□□□□□ -1.36
PTPRO-208ENST00000542557 PDSS2Q86YH6 399 aa6.59□□□□□ -1.36
PTPRO-208ENST00000542557 TMEM126BQ8IUX1 230 aa6.59□□□□□ -1.36
PTPRO-208ENST00000542557 SLC22A9Q8IVM8 553 aa6.59□□□□□ -1.36
PTPRO-208ENST00000542557 DSELQ8IZU8 1212 aa6.59□□□□□ -1.36
PTPRO-208ENST00000542557 PELI3Q8N2H9 469 aa6.59□□□□□ -1.36
PTPRO-208ENST00000542557 CEP70Q8NHQ1 597 aa6.59□□□□□ -1.36
PTPRO-208ENST00000542557 UCMAQ8WVF2 138 aa6.59□□□□□ -1.36
PTPRO-208ENST00000542557 PYDC1Q8WXC3 89 aa6.59□□□□□ -1.36
PTPRO-208ENST00000542557 IFT43Q96FT9 208 aa6.59□□□□□ -1.36
PTPRO-208ENST00000542557 UBXN10Q96LJ8 280 aa6.59□□□□□ -1.36
PTPRO-208ENST00000542557 EML4Q9HC35 981 aaKnown RBP6.59□□□□□ -1.36
PTPRO-208ENST00000542557 TRPC7Q9HCX4 862 aa6.59□□□□□ -1.36
PTPRO-208ENST00000542557 BCAP29Q9UHQ4 241 aa6.59□□□□□ -1.36
PTPRO-208ENST00000542557 RIMKLBQ9ULI2 386 aa6.59□□□□□ -1.36
PTPRO-208ENST00000542557 SUFUQ9UMX1 484 aa6.59□□□□□ -1.36
PTPRO-208ENST00000542557 DNAH12Q6ZR08 3092 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 MOXD2PA6NHM9 499 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 A8MT66 165 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 H3BNX3 289 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 RAMP2O60895 175 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 CNTN5O94779 1100 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 JUNP05412 331 aaKnown RBP6.58□□□□□ -1.36
PTPRO-208ENST00000542557 PRKAR2AP13861 404 aaKnown RBP6.58□□□□□ -1.36
PTPRO-208ENST00000542557 HLA-DPA1P20036 260 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 YWHAQP27348 245 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 PBX3P40426 434 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 OR1G1P47890 313 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 DSC2Q02487 901 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 EFEMP1Q12805 493 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 SERINC3Q13530 473 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 CSHL1Q14406 222 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 PDCD2Q16342 344 aaPredicted RBP6.58□□□□□ -1.36
PTPRO-208ENST00000542557 PIGGQ5H8A4 983 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 SIRPB2Q5JXA9 342 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 TCHHL1Q5QJ38 904 aaPredicted RBP6.58□□□□□ -1.36
PTPRO-208ENST00000542557 HECTD2Q5U5R9 776 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 SDHAF4Q5VUM1 108 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 ALG1LQ6GMV1 187 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 FAM45BPQ6NSW5 357 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 FBXL22Q6P050 247 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 CCNYL1Q8N7R7 359 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 FAM45AQ8TCE6 357 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 DLG3Q92796 817 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 FBXO32Q969P5 355 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 PSMG2Q969U7 264 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 PABPC5Q96DU9 382 aaKnown RBP6.58□□□□□ -1.36
PTPRO-208ENST00000542557 MOCOSQ96EN8 888 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 FEM1CQ96JP0 617 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 SPATA17Q96L03 361 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 ZNF599Q96NL3 588 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 CATSPER2Q96P56 530 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 KLHL5Q96PQ7 755 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 KLHL4Q9C0H6 718 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 RETREG1Q9H6L5 497 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 MEAF6Q9HAF1 191 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 POPDC3Q9HBV1 291 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 TLR8Q9NR97 1041 aaKnown RBP6.58□□□□□ -1.36
PTPRO-208ENST00000542557 SPATS2LQ9NUQ6 558 aaKnown RBP6.58□□□□□ -1.36
PTPRO-208ENST00000542557 UTP6Q9NYH9 597 aaKnown RBP6.58□□□□□ -1.36
PTPRO-208ENST00000542557 C6orf203Q9P0P8 240 aaPredicted RBP6.58□□□□□ -1.36
PTPRO-208ENST00000542557 VWA7Q9Y334 891 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 COPG1Q9Y678 874 aaKnown RBP6.58□□□□□ -1.36
PTPRO-208ENST00000542557 AIM2O14862 343 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 LDB2O43679 373 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms