RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 PRDM14Q9GZV8 571 aa4.38□□□□□ -1.71
SNHG1-219ENST00000542112 TWSG1Q9GZX9 223 aa4.38□□□□□ -1.71
SNHG1-219ENST00000542112 QRSL1Q9H0R6 528 aaKnown RBP4.38□□□□□ -1.71
SNHG1-219ENST00000542112 ARMC7Q9H6L4 198 aa4.38□□□□□ -1.71
SNHG1-219ENST00000542112 EPS8L2Q9H6S3 715 aa4.38□□□□□ -1.71
SNHG1-219ENST00000542112 NHEJ1Q9H9Q4 299 aaPredicted RBP4.38□□□□□ -1.71
SNHG1-219ENST00000542112 GPN2Q9H9Y4 310 aaPredicted RBP4.38□□□□□ -1.71
SNHG1-219ENST00000542112 PCDH12Q9NPG4 1184 aa4.38□□□□□ -1.71
SNHG1-219ENST00000542112 ARHGEF4Q9NR80 690 aa4.38□□□□□ -1.71
SNHG1-219ENST00000542112 CHST12Q9NRB3 414 aa4.38□□□□□ -1.71
SNHG1-219ENST00000542112 RGS18Q9NS28 235 aa4.38□□□□□ -1.71
SNHG1-219ENST00000542112 DNAJC28Q9NX36 388 aa4.38□□□□□ -1.71
SNHG1-219ENST00000542112 TMOD2Q9NZR1 351 aa4.38□□□□□ -1.71
SNHG1-219ENST00000542112 ANKFY1Q9P2R3 1169 aa4.38□□□□□ -1.71
SNHG1-219ENST00000542112 EIF3KQ9UBQ5 218 aaKnown RBP4.38□□□□□ -1.71
SNHG1-219ENST00000542112 ENOPH1Q9UHY7 261 aa4.38□□□□□ -1.71
SNHG1-219ENST00000542112 TSPYL4Q9UJ04 414 aa4.38□□□□□ -1.71
SNHG1-219ENST00000542112 TRMT6Q9UJA5 497 aaKnown RBP4.38□□□□□ -1.71
SNHG1-219ENST00000542112 ZBTB21Q9ULJ3 1066 aa4.38□□□□□ -1.71
SNHG1-219ENST00000542112 SPATA2Q9UM82 520 aa4.38□□□□□ -1.71
SNHG1-219ENST00000542112 PHTF1Q9UMS5 762 aa4.38□□□□□ -1.71
SNHG1-219ENST00000542112 PLAGL2Q9UPG8 496 aa4.38□□□□□ -1.71
SNHG1-219ENST00000542112 RAXQ9Y2V3 346 aa4.38□□□□□ -1.71
SNHG1-219ENST00000542112 EMC9Q9Y3B6 208 aa4.38□□□□□ -1.71
SNHG1-219ENST00000542112 GRIP1Q9Y3R0 1128 aa4.38□□□□□ -1.71
SNHG1-219ENST00000542112 NEU2Q9Y3R4 380 aa4.38□□□□□ -1.71
SNHG1-219ENST00000542112 RIPK3Q9Y572 518 aa4.38□□□□□ -1.71
SNHG1-219ENST00000542112 PCDHA13Q9Y5I0 950 aa4.38□□□□□ -1.71
SNHG1-219ENST00000542112 AUP1Q9Y679 476 aa4.38□□□□□ -1.71
SNHG1-219ENST00000542112 ABCB11O95342 1321 aa4.38□□□□□ -1.71
SNHG1-219ENST00000542112 STK36Q9NRP7 1315 aa4.38□□□□□ -1.71
SNHG1-219ENST00000542112 MYH7BA7E2Y1 1941 aa4.38□□□□□ -1.71
SNHG1-219ENST00000542112 PXDNLA1KZ92 1463 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 NHSL1Q5SYE7 1610 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 DNAJC25-GNG10A0A024R161 153 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 TRBV23-1A0A0A0MS06 115 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 LINC00862A6NCI5 91 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 TUBAL3A6NHL2 446 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 FAM47DPA6NHR8 397 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 HMX3A6NHT5 357 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 LRRC53A6NM62 1247 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 FAM170BA6NMN3 283 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 FAM155AB1AL88 458 aaPredicted RBP4.37□□□□□ -1.71
SNHG1-219ENST00000542112 C1QTNF9BB2RNN3 333 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 SGK1O00141 431 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 PER2O15055 1255 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 ANGPT2O15123 496 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 SLC7A4O43246 635 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 CALUO43852 315 aaPredicted RBP4.37□□□□□ -1.71
SNHG1-219ENST00000542112 PLA2G6O60733 806 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 TRIM3O75382 744 aaPredicted RBP4.37□□□□□ -1.71
SNHG1-219ENST00000542112 LEFTY1O75610 366 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 SNAPC5O75971 98 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 VNN1O95497 513 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 GGPS1O95749 300 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 TTLL1O95922 423 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 BCL10O95999 233 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 A1BGP04217 495 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 UGT2B4P06133 528 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 ANXA6P08133 673 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 PSMC3P17980 439 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 CCNA2P20248 432 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 ABCB4P21439 1286 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 ERP29P30040 261 aaKnown RBP4.37□□□□□ -1.71
SNHG1-219ENST00000542112 PDIA3P30101 505 aaKnown RBP4.37□□□□□ -1.71
SNHG1-219ENST00000542112 CDH5P33151 784 aaPredicted RBP4.37□□□□□ -1.71
SNHG1-219ENST00000542112 CYP2C18P33260 490 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 TRHRP34981 398 aaPredicted RBP4.37□□□□□ -1.71
SNHG1-219ENST00000542112 SOX5P35711 763 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 ARL1P40616 181 aaPredicted RBP4.37□□□□□ -1.71
SNHG1-219ENST00000542112 CHRNA4P43681 627 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 GATA4P43694 442 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 ATP5OP48047 213 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 HADHBP55084 474 aaKnown RBP4.37□□□□□ -1.71
SNHG1-219ENST00000542112 RNASE9P60153 205 aaKnown RBP4.37□□□□□ -1.71
SNHG1-219ENST00000542112 YWHAEP62258 255 aaKnown RBP4.37□□□□□ -1.71
SNHG1-219ENST00000542112 CAV1Q03135 178 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 UBE3AQ05086 875 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 TEFQ10587 303 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 BFSP1Q12934 665 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 GRB10Q13322 594 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 MFSD13AQ14CX5 517 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 TAF12Q16514 161 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 ZNF181Q2M3W8 571 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 LRIT3Q3SXY7 679 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 TAF1BQ53T94 588 aaPredicted RBP4.37□□□□□ -1.71
SNHG1-219ENST00000542112 YIF1BQ5BJH7 314 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 TCP11X2Q5H9J9 407 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 SLC9C2Q5TAH2 1124 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 KLHDC7AQ5VTJ3 777 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 IRAK1BP1Q5VVH5 260 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 TPGS2Q68CL5 300 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 SLC9A4Q6AI14 798 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 RETSATQ6NUM9 610 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 PPP1R2P3Q6NXS1 205 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 C3orf33Q6P1S2 294 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 NFRKBQ6P4R8 1299 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 CFAP161Q6P656 301 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 ZYG11AQ6WRX3 759 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 CATSPERGQ6ZRH7 1159 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms