RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 PYGMP11217 842 aa9.8□□□□□ -0.84
YBX3-212ENST00000542002 MX2P20592 715 aa9.8□□□□□ -0.84
YBX3-212ENST00000542002 HNRNPA2B1P22626 353 aaKnown RBP9.8□□□□□ -0.84
YBX3-212ENST00000542002 SERPINA4P29622 427 aa9.8□□□□□ -0.84
YBX3-212ENST00000542002 NUDT1P36639 197 aa9.8□□□□□ -0.84
YBX3-212ENST00000542002 MMP12P39900 470 aa9.8□□□□□ -0.84
YBX3-212ENST00000542002 LIG3P49916 1009 aa9.8□□□□□ -0.84
YBX3-212ENST00000542002 NAP1L1P55209 391 aaKnown RBP9.8□□□□□ -0.84
YBX3-212ENST00000542002 C21orf59P57076 290 aa9.8□□□□□ -0.84
YBX3-212ENST00000542002 CCZ1BP86790 482 aa9.8□□□□□ -0.84
YBX3-212ENST00000542002 CCZ1P86791 482 aaPredicted RBP9.8□□□□□ -0.84
YBX3-212ENST00000542002 BNIP3Q12983 259 aa9.8□□□□□ -0.84
YBX3-212ENST00000542002 SLC14A1Q13336 389 aa9.8□□□□□ -0.84
YBX3-212ENST00000542002 N4BP2L1Q5TBK1 243 aaPredicted RBP9.8□□□□□ -0.84
YBX3-212ENST00000542002 ALG1LQ6GMV1 187 aa9.8□□□□□ -0.84
YBX3-212ENST00000542002 PSAPL1Q6NUJ1 521 aa9.8□□□□□ -0.84
YBX3-212ENST00000542002 IL27RAQ6UWB1 636 aa9.8□□□□□ -0.84
YBX3-212ENST00000542002 Q6ZSR6 202 aa9.8□□□□□ -0.84
YBX3-212ENST00000542002 ADAT2Q7Z6V5 191 aaKnown RBP9.8□□□□□ -0.84
YBX3-212ENST00000542002 ABI3BPQ7Z7G0 1075 aa9.8□□□□□ -0.84
YBX3-212ENST00000542002 KIAA1328Q86T90 577 aa9.8□□□□□ -0.84
YBX3-212ENST00000542002 IQCHQ86VS3 1027 aa9.8□□□□□ -0.84
YBX3-212ENST00000542002 CCDC13Q8IYE1 715 aa9.8□□□□□ -0.84
YBX3-212ENST00000542002 CBARPQ8N350 705 aaPredicted RBP9.8□□□□□ -0.84
YBX3-212ENST00000542002 TP53I13Q8NBR0 393 aaPredicted RBP9.8□□□□□ -0.84
YBX3-212ENST00000542002 PIH1D2Q8WWB5 315 aa9.8□□□□□ -0.84
YBX3-212ENST00000542002 SPOCK2Q92563 424 aa9.8□□□□□ -0.84
YBX3-212ENST00000542002 IL12RB2Q99665 862 aa9.8□□□□□ -0.84
YBX3-212ENST00000542002 C10orf88Q9H8K7 445 aa9.8□□□□□ -0.84
YBX3-212ENST00000542002 GRPEL1Q9HAV7 217 aa9.8□□□□□ -0.84
YBX3-212ENST00000542002 TM7SF3Q9NS93 570 aa9.8□□□□□ -0.84
YBX3-212ENST00000542002 PNMA8BQ9ULN7 279 aaPredicted RBP9.8□□□□□ -0.84
YBX3-212ENST00000542002 PACSIN2Q9UNF0 486 aaPredicted RBP9.8□□□□□ -0.84
YBX3-212ENST00000542002 PCDHB9Q9Y5E1 797 aa9.8□□□□□ -0.84
YBX3-212ENST00000542002 RAI2Q9Y5P3 530 aa9.8□□□□□ -0.84
YBX3-212ENST00000542002 HS3ST3A1Q9Y663 406 aa9.8□□□□□ -0.84
YBX3-212ENST00000542002 PLXNA2O75051 1894 aa9.79□□□□□ -0.84
YBX3-212ENST00000542002 A0A1B0GTQ1 180 aa9.79□□□□□ -0.84
YBX3-212ENST00000542002 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.79□□□□□ -0.84
YBX3-212ENST00000542002 DDX3YO15523 660 aaKnown RBP9.79□□□□□ -0.84
YBX3-212ENST00000542002 PGLSO95336 258 aa9.79□□□□□ -0.84
YBX3-212ENST00000542002 IPO7O95373 1038 aaKnown RBP9.79□□□□□ -0.84
YBX3-212ENST00000542002 CER1O95813 267 aa9.79□□□□□ -0.84
YBX3-212ENST00000542002 FTCDO95954 541 aa9.79□□□□□ -0.84
YBX3-212ENST00000542002 ZNF883P0CG24 379 aa9.79□□□□□ -0.84
YBX3-212ENST00000542002 THEGLP0DJG4 465 aa9.79□□□□□ -0.84
YBX3-212ENST00000542002 C6P13671 934 aa9.79□□□□□ -0.84
YBX3-212ENST00000542002 ZFXP17010 805 aaPredicted RBP9.79□□□□□ -0.84
YBX3-212ENST00000542002 CSRP1P21291 193 aaKnown RBP9.79□□□□□ -0.84
YBX3-212ENST00000542002 CTNNA2P26232 953 aa9.79□□□□□ -0.84
YBX3-212ENST00000542002 AKT2P31751 481 aa9.79□□□□□ -0.84
YBX3-212ENST00000542002 HSPA9P38646 679 aaKnown RBP9.79□□□□□ -0.84
YBX3-212ENST00000542002 SUOXP51687 545 aa9.79□□□□□ -0.84
YBX3-212ENST00000542002 GSDMDP57764 484 aa9.79□□□□□ -0.84
YBX3-212ENST00000542002 IFI35P80217 286 aaPredicted RBP9.79□□□□□ -0.84
YBX3-212ENST00000542002 ITKQ08881 620 aa9.79□□□□□ -0.84
YBX3-212ENST00000542002 AP1B1Q10567 949 aa9.79□□□□□ -0.84
YBX3-212ENST00000542002 KIF5AQ12840 1032 aa9.79□□□□□ -0.84
YBX3-212ENST00000542002 SGCGQ13326 291 aa9.79□□□□□ -0.84
YBX3-212ENST00000542002 PDK1Q15118 436 aa9.79□□□□□ -0.84
YBX3-212ENST00000542002 WSCD2Q2TBF2 565 aa9.79□□□□□ -0.84
YBX3-212ENST00000542002 ZNF542PQ5EBM4 170 aa9.79□□□□□ -0.84
YBX3-212ENST00000542002 TFDP3Q5H9I0 405 aa9.79□□□□□ -0.84
YBX3-212ENST00000542002 TIGD7Q6NT04 549 aaPredicted RBP9.79□□□□□ -0.84
YBX3-212ENST00000542002 LIPIQ6XZB0 460 aa9.79□□□□□ -0.84
YBX3-212ENST00000542002 RFLNAQ6ZTI6 216 aa9.79□□□□□ -0.84
YBX3-212ENST00000542002 ERMP1Q7Z2K6 904 aa9.79□□□□□ -0.84
YBX3-212ENST00000542002 KANSL1Q7Z3B3 1105 aa9.79□□□□□ -0.84
YBX3-212ENST00000542002 GATAD2AQ86YP4 633 aa9.79□□□□□ -0.84
YBX3-212ENST00000542002 PELI3Q8N2H9 469 aa9.79□□□□□ -0.84
YBX3-212ENST00000542002 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.79□□□□□ -0.84
YBX3-212ENST00000542002 SAP25Q8TEE9 199 aa9.79□□□□□ -0.84
YBX3-212ENST00000542002 PDCD6IPQ8WUM4 868 aaKnown RBP9.79□□□□□ -0.84
YBX3-212ENST00000542002 NSMCE1Q8WV22 266 aa9.79□□□□□ -0.84
YBX3-212ENST00000542002 ASB12Q8WXK4 309 aa9.79□□□□□ -0.84
YBX3-212ENST00000542002 HAUS1Q96CS2 278 aa9.79□□□□□ -0.84
YBX3-212ENST00000542002 KLHDC7BQ96G42 594 aa9.79□□□□□ -0.84
YBX3-212ENST00000542002 ELF4Q99607 663 aaPredicted RBP9.79□□□□□ -0.84
YBX3-212ENST00000542002 GPR27Q9NS67 375 aa9.79□□□□□ -0.84
YBX3-212ENST00000542002 KLF15Q9UIH9 416 aa9.79□□□□□ -0.84
YBX3-212ENST00000542002 PCOLCE2Q9UKZ9 415 aa9.79□□□□□ -0.84
YBX3-212ENST00000542002 PPIL1Q9Y3C6 166 aa9.79□□□□□ -0.84
YBX3-212ENST00000542002 CAPN6Q9Y6Q1 641 aa9.79□□□□□ -0.84
YBX3-212ENST00000542002 DOCK9Q9BZ29 2069 aa9.78□□□□□ -0.84
YBX3-212ENST00000542002 SPAARA0A1B0GVQ0 90 aa9.78□□□□□ -0.84
YBX3-212ENST00000542002 SOCS5O75159 536 aa9.78□□□□□ -0.84
YBX3-212ENST00000542002 TM7SF2O76062 418 aa9.78□□□□□ -0.84
YBX3-212ENST00000542002 ALPIP09923 528 aa9.78□□□□□ -0.84
YBX3-212ENST00000542002 CEACAM1P13688 526 aa9.78□□□□□ -0.84
YBX3-212ENST00000542002 CTPS1P17812 591 aa9.78□□□□□ -0.84
YBX3-212ENST00000542002 LHCGRP22888 699 aa9.78□□□□□ -0.84
YBX3-212ENST00000542002 XPAP23025 273 aaPredicted RBP9.78□□□□□ -0.84
YBX3-212ENST00000542002 CD68P34810 354 aaPredicted RBP9.78□□□□□ -0.84
YBX3-212ENST00000542002 HNF1BP35680 557 aa9.78□□□□□ -0.84
YBX3-212ENST00000542002 IGFALSP35858 605 aa9.78□□□□□ -0.84
YBX3-212ENST00000542002 PI4KAP42356 2102 aa9.78□□□□□ -0.84
YBX3-212ENST00000542002 RXRGP48443 463 aa9.78□□□□□ -0.84
YBX3-212ENST00000542002 NR2C2P49116 596 aa9.78□□□□□ -0.84
YBX3-212ENST00000542002 NOVA1P51513 510 aaKnown RBP9.78□□□□□ -0.84
YBX3-212ENST00000542002 PFN3P60673 137 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms